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Proteomics 2022 September 12th-16th
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 September 12th
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Monday
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 TimeTopicSpeakerRoom
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8:00 AMCoffee and Check-inSponsored byMeyer Hall 1312
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8:15 - 9:15Introduction to Proteomics WorkshopDr. Brett Phinney, UCD Genome Center Proteomics CoreMeyer Hall 1312 & 1420
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9:45-10:15Intro to Wet Lab (break up into groups)Michelle Salemi, Dr Gabriela Grigorean, Lauren Dixon UCD Genome Center Proteomics CoreMeyer Hall 1312 & 1420
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10:15 - 11:45In Solution Digestion (Group 1); S-Trap Digestion (Group 2)Michelle Salemi, Dr Gabriela Grigorean, Lauren Dixon UCD Genome Center Proteomics CoreMeyer Hall 1312 & 1420
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Bruker Lunch Learn
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1:15 - 2:45In Solution Digestion (Group 2); S-Trap Digestion (Group 1)Michelle Salemi, Dr Gabriela Grigorean, Lauren Dixon UCD Genome Center Proteomics CoreMeyer Hall 1312 & 1420
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2:45 - 3:00BreakSponsored byMeyer
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3:00 - 4Lecture John Wilson Sample prep GroupMichelle Salemi UCD Genome Center Proteomics CoreMeyer Hall 1312 & 1420
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4-5Protein Extraction Lab Second Group Each Michelle Salemi, Dr Gabriela Grigorean, Lauren Dixon UCD Genome Center Proteomics CoreMeyer Hall 1312 & 1420
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6:30-9 PM3mile Brewery get together & Easel TalkEveryone!!3 mile Brewery downtown
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BreaksLectureLab
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Proteomics 2018 Sep 9-13th
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September 13th
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Tuesday
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 TimeTopicSpeakerRoom
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8:00 AMCoffee and breakfast Sponsored by ProteFiMeyer Hall room 1312
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8:30 - 9:30S-trap ElutionMichelle Salemi, Dr Gabriela Grigorean, Lauren Dixon UCD Genome Center Proteomics CoreMeyer Hall room 1312
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9:30 - 10:30Finish up In Solution Digestions. SPE CleanupMichelle Salemi, Dr Gabriela Grigorean, Lauren Dixon UCD Genome Center Proteomics CoreMeyer Hall room 1312
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10:30-11:45Intro to Mass specMichelle Salemi, Dr Gabriela Grigorean, Lauren Dixon UCD Genome Center Proteomics CoreMeyer Hall room 1312
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LunchTBDMedical Sciences Building C
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1:00 - 1:30LCMSDr. Gabriela Girgorean , UCD Genome Center Proteomics CoreGBSF 4202 or MEdSci CMedical Sciences Building C
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1:30-2:30 pmLeveraging proteomics to understand disease pathologyDr. Danielle Swaney UCSFGBSF 4202 or MEdSci CMedical Sciences Building C
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2:30 - 4:45LCMS Tecan S-Trap Lab, Lab split into 4 groupsUC Davis Proteomics Core Team
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Medical Sciences Building C
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4:45-5:30
Dr David Quilici UNR RenoGBSF Auditorium
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Approx 5:30 pmAdjourn
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My Proteomic Notes:
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 LectureLab
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Proteomics 2018 Sep 9-13th
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 September 14th
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Wednesday
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 TimeTopicSpeakerRoom
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8:00 AMCoffeeTBDThe Grove
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8:30-10:00Protein ID & Looking at and Converting Raw DataDr. Brett Phinney, UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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10 - 10:15Short breakSponsored by RaininTBDThe Grove
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10:15-11:00Looking at and Converting Raw Data Part 2 and Data dependant AnalysisDr. Brett Phinney, UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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11:00-12:00Protein Identification using MSFraggerDr. Gabriela Girgorean , UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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Lunch TBDThe Grove
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1:00-2:00TBA Dr. Jordan Burton Buck InstituteTeaching and Learning Complex (TLC)
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2:00-3:00Lecture TBDBennett Penn, UC DavisTeaching and Learning Complex (TLC)
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3:00 - 3:15BreakSponsored by EvosepTBDThe Grove
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3:15-4:15DIA-NNBrett , UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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4:15 - 5:15Proteomic Data Analysis DIADr. Brett Phinney, UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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5:15Adjourn
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My Proteomic Notes:
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 LectureComputer Lab
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 Proteomics 2018 Sep 9-13th
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September 15th
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Thursday
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 TimeTopicSpeakerRoom
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8:00 - 9:45Protein ID and Spectral Counting Exercise Dr. Brett Phinney, UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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9:45 - 10:00BreakTBD
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10:00 - 11:00Introduction to Protein Quantitation and Advanced Quantitation LabDr. Brett Phinney, UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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11:00 - 12:00Data Independant analysis of Atrtic Fishes Dr Dietmar Kueltz, UC DavisTeaching and Learning Complex (TLC)
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Lunch TBDgrove (surge III)
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1:00-2:00TBDDr. Glendon Parker UCDTeaching and Learning Complex (TLC)
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2:00- 3:00DIA data Analysis LabDr. Brett Phinney, UCD Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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3:00-3:15BreakTBD
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3:15-5:00De novo Sequencing & more computer lab!!Michelle Salemi, UC Davis Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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5:00Adjourn
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My Proteomic Notes:
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 LectureComputer Lab
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Proteomics 2018 Sep 10-14th
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September 16th
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Friday
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 TimeTopicSpeakerRoom
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9:00-10TBDDr Paul Haggerman UCDTeaching and Learning Complex (TLC)
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10:00-10:15BreakSponsored by Bruker
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10:15-10:45De novo Quiz Results and QuestionsMichelle Salemi, UC Davis Genome Center Proteomics CoreTeaching and Learning Complex (TLC)
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10:45-11:45Informatics by Ryan LeibDr Ryan Leib, StanfordTeaching and Learning Complex (TLC)
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Lunch TBD
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1:00-2:45
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2:45-3:00BreakSponsored by BrukerTBD
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3-4What? There are proteins in my beer!”Dr.Glen Fox ,UC Davis
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