A | B | C | D | E | F | G | H | I | J | L | O | P | Q | R | S | T | U | V | W | X | Y | Z | AA | AB | AC | AD | AE | AF | AG | AH | AI | AJ | AK | AL | AM | AN | AO | AP | AQ | AR | AS | AT | AU | AV | AW | AX | AY | AZ | BA | BB | BC | BD | BE | BF | BG | BH | BI | BJ | BK | BL | BM | BN | BO | BP | BQ | BR | BS | BT | BU | BV | BW | BX | BY | BZ | CA | CB | CC | CD | CE | CF | CG | CH | CI | CJ | CK | CL | CM | CN | CO | CP | CQ | ||
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1 | Comments | Epigenome ID (EID) | ORDER | GROUP | COLOR | Epigenome Mnemonic | Under Seq | Quality Rating | Auto Use Train (Core) | Manual Use Train (Core) | Train Core + K27ac | Standardized Epigenome name | Epigenome name (from EDACC Release 9 directory) | ANATOMY | TYPE | LAB (Based on 5 core histone marks only) | AGE (Post Birth in YEARS/ Fetal in GESTATIONAL WEEKS/CELL LINE CL) | SEX (Male, Female, Mixed, Unknown) | SOLID / LIQUID | ETHNICITY | Single Donor (SD) /Composite (C) | DONOR / SAMPLE ALIAS | CLASS | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Nreads (36bp) 30M | Nreads (36bp) 30M | Nreads (36bp) 30M | Nreads (36bp) 30M | Nreads (36bp) 30M | Nreads (36bp) 30M | Nreads (36bp) 30M | Nreads (36bp) 30M | Nreads (36bp) 50M | NSC (Signal to noise) | NSC (Signal to noise) | NSC (Signal to noise) | NSC (Signal to noise) | NSC (Signal to noise) | NSC (Signal to noise) | NSC (Signal to noise) | NSC (Signal to noise) | NSC (Signal to noise) | RSC (Phantom Peak) | RSC (Phantom Peak) | RSC (Phantom Peak) | RSC (Phantom Peak) | RSC (Phantom Peak) | RSC (Phantom Peak) | RSC (Phantom Peak) | RSC (Phantom Peak) | RSC (Phantom Peak) | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | Pool Filenames | ||||||
2 | Core Marks | 33 | 64 | 43 | (Check this) | Input | H3K9me3 | H3K27me3 | H3K4me3 | H3K4me1 | H3K36me3 | H3K27ac | H3K9ac | DNase | RNA-seq | WGBS | RRBS | mCRF | Input | H3K9me3 | H3K27me3 | H3K4me3 | H3K4me1 | H3K36me3 | H3K27ac | H3K9ac | DNase | Input | H3K9me3 | H3K27me3 | H3K4me3 | H3K4me1 | H3K36me3 | H3K27ac | H3K9ac | DNase | Input | H3K9me3 | H3K27me3 | H3K4me3 | H3K4me1 | H3K36me3 | H3K27ac | H3K9ac | DNase | H3K4me2 | H2AK5ac | H2BK120ac | H2BK5ac | H3K18ac | H3K23ac | H3K4ac | H3K79me1 | H4K8ac | H2BK12ac | H3K14ac | H4K91ac | H2A.Z | H2BK15ac | H3K79me2 | H2BK20ac | H3K56ac | H4K20me1 | H4K5ac | H3K23me2 | H2AK9ac | H3K9me1 | H3T11ph | H4K12ac | ||||||||||||||||||||||||
3 | 94 | 60 | 40 | 50 | 23 | 47 | 127 | 127 | 127 | 127 | 127 | 127 | 98 | 62 | 53 | 56 | 37 | 51 | 16 | 127 | 127 | 127 | 127 | 127 | 127 | 98 | 62 | 53 | 1.012633 | 1.035528 | 1.030716 | 1.507494 | 1.084975 | 1.036695 | 1.3088515 | 1.2081465 | 1.633475 | 0.4490405 | 0.4018559 | 0.8615358 | 1.18459 | 1.12977 | 0.7584003 | 1.34311 | 1.3804895 | 1.017931 | 24 | 7 | 7 | 7 | 7 | 7 | 7 | 7 | 7 | 6 | 6 | 6 | 23 | 5 | 21 | 3 | 3 | 19 | 3 | 2 | 1 | 4 | 2 | 1 | |||||||||||||||||||||||
4 | Outlier DNA methylation data due (older platform) | E017 | 1 | IMR90 | #E41A1C | LNG.IMR90 | 1 | 1 | 1 | 1 | 1 | IMR90 fetal lung fibroblasts Cell Line | IMR90_Cell_Line | LUNG | CellLine | UCSD | CL | Female | NA | NA | SD | IMR90_r1;IMR90-04;IMR90-05;IMR90-06;IMR90-07 | Class 1 | UCSD.IMR90.Input.SK-I3.filt.*;UCSD.IMR90.Input.IMR90-07-I1.filt.*;UCSD.IMR90.Input.SK-I2.filt.*;UCSD.IMR90.Input.IMR90-06-I1.filt.*;UCSD.IMR90.Input.AK106.filt.*;UCSD.IMR90.Input.SK-I1.filt.*;UCSD.IMR90.Input.IMR90-05-I1.filt.*;UCSD.IMR90.Input.LL-I2.filt.*;UCSD.IMR90.Input.LL-I1.filt.* | UCSD.IMR90.H3K9me3.SK06.filt.*;UCSD.IMR90.H3K9me3.LL224.filt.*;UCSD.IMR90.H3K9me3.YL104.filt.* | UCSD.IMR90.H3K27me3.SK05.filt.*;UCSD.IMR90.H3K27me3.LL223.filt.* | UCSD.IMR90.H3K4me3.LL221.filt.*;UCSD.IMR90.H3K4me3.SK03.filt.* | UCSD.IMR90.H3K4me1.LL222.filt.*;UCSD.IMR90.H3K4me1.SK04.filt.*;UCSD.IMR90.H3K4me1.SYL133.filt.* | UCSD.IMR90.H3K36me3.YL67.filt.*;UCSD.IMR90.H3K36me3.LL225.filt.* | UCSD.IMR90.H3K27ac.LL235.filt.*;UCSD.IMR90.H3K27ac.LL231.filt.*;UCSD.IMR90.H3K27ac.YL58.filt.* | UCSD.IMR90.H3K9ac.LL233.filt.*;UCSD.IMR90.H3K9ac.SK46.filt.* | UW.IMR90.ChromatinAccessibility.DS13229.filt.*;UW.IMR90.ChromatinAccessibility.DS11764.filt.*;UW.IMR90.ChromatinAccessibility.DS13219.filt.*;UW.IMR90.ChromatinAccessibility.DS11759.filt.* | E017 | 30000000 | 30000000 | 30000000 | 28065544 | 30000000 | 30000000 | 30000000 | 23399369 | 50000000 | 1.03108 | 1.074719 | 1.061967 | 3.192476 | 1.261518 | 1.107083 | 1.944476 | 1.810492 | 1.850876 | 0.7475458 | 0.6717179 | 1.884087 | 1.310055 | 1.676567 | 1.35523 | 1.56888 | 1.508148 | 1.005632 | UCSD.IMR90.H3K4me2.SK07.bed.gz;UCSD.IMR90.H3K4me2.LL232.bed.gz | UCSD.IMR90.H2AK5ac.YL60.bed.gz;UCSD.IMR90.H2AK5ac.YL20.bed.gz | UCSD.IMR90.H2BK120ac.YL06.bed.gz;UCSD.IMR90.H2BK120ac.SK15.bed.gz | UCSD.IMR90.H2BK5ac.YL281.bed.gz;UCSD.IMR90.H2BK5ac.SK10.bed.gz;UCSD.IMR90.H2BK5ac.LL229.bed.gz | UCSD.IMR90.H3K18ac.SK09.bed.gz;UCSD.IMR90.H3K18ac.LL230.bed.gz | UCSD.IMR90.H3K23ac.SK18.bed.gz;UCSD.IMR90.H3K23ac.YL09.bed.gz | UCSD.IMR90.H3K4ac.LL239.bed.gz;UCSD.IMR90.H3K4ac.SK16.bed.gz | UCSD.IMR90.H3K79me1.SK11.bed.gz;UCSD.IMR90.H3K79me1.YL145.bed.gz;UCSD.IMR90.H3K79me1.YL16.bed.gz;UCSD.IMR90.H3K79me1.YL103.bed.gz | UCSD.IMR90.H4K8ac.YL17.bed.gz;UCSD.IMR90.H4K8ac.YL142.bed.gz;UCSD.IMR90.H4K8ac.YL57.bed.gz;UCSD.IMR90.H4K8ac.SK45.bed.gz | UCSD.IMR90.H2BK12ac.YL68.bed.gz;UCSD.IMR90.H2BK12ac.YL138.bed.gz;UCSD.IMR90.H2BK12ac.YL18.bed.gz | UCSD.IMR90.H3K14ac.SK17.bed.gz;UCSD.IMR90.H3K14ac.YL15.bed.gz | UCSD.IMR90.H4K91ac.SK49.bed.gz;UCSD.IMR90.H4K91ac.YL08.bed.gz | UCSD.IMR90.H2A.Z.AY4.bed.gz;UCSD.IMR90.H2A.Z.AY5.bed.gz | UCSD.IMR90.H2BK15ac.YL19.bed.gz;UCSD.IMR90.H2BK15ac.YL69.bed.gz;UCSD.IMR90.H2BK15ac.SK42.bed.gz | UCSD.IMR90.H3K79me2.LL238.bed.gz;UCSD.IMR90.H3K79me2.SK43.bed.gz | UCSD.IMR90.H2BK20ac.YL07.bed.gz;UCSD.IMR90.H2BK20ac.SK14.bed.gz | UCSD.IMR90.H3K56ac.YL05.bed.gz;UCSD.IMR90.H3K56ac.YL61.bed.gz | UCSD.IMR90.H4K20me1.YL59.bed.gz;UCSD.IMR90.H4K20me1.YL21.bed.gz | UCSD.IMR90.H4K5ac.LL234.bed.gz;UCSD.IMR90.H4K5ac.SK08.bed.gz | UCSD.IMR90.H2AK9ac.AY6.bed.gz;UCSD.IMR90.H2AK9ac.AY7.bed.gz | UCSD.IMR90.H3K9me1.SK12.bed.gz;UCSD.IMR90.H3K9me1.LL237.bed.gz | ||||||||||||
5 | E002 | 2 | ESC | #924965 | ESC.WA7 | -1 | -1 | 0 | 0 | 0 | ES-WA7 Cells | ES-WA7_Cell_Line | ESC | PrimaryCulture | BI | CL | Female | NA | NA | SD | 58;35206;35207;35208;35210;36544 | Class 4 | BI.ES-WA7.Input.Lib_MC_20100211_05--ChIP_MC_20100208_05_WA07_WCE.filt.* | BI.ES-WA7.H3K9me3.Solexa-12613.filt.* | BI.ES-WA7.H3K27me3.Solexa-12609.filt.* | BI.ES-WA7.H3K4me3.Solexa-13062.filt.* | BI.ES-WA7.H3K4me1.Solexa-12611.filt.* | BI.ES-WA7.H3K36me3.Solexa-12610.filt.* | BI.ES-WA7.H3K9ac.Lib_MC_20100818_06--ChIP_MC_20100816_01_WA07_H3K9Ac.filt.* | E002 | 10943655 | 7322985 | 13246745 | 6147367 | 10108554 | 9533889 | 29503477 | 1.176076 | 1.037905 | 1.093496 | 1.370005 | 1.165568 | 1.047472 | 1.163441 | 2.990425 | 0.3841219 | 1.236339 | 1.579291 | 1.921605 | 1.762133 | 1.449967 | ||||||||||||||||||||||||||||||||||||||||||
6 | E008 | 3 | ESC | #924965 | ESC.H9 | 1 | 1 | 1 | 1 | 0 | H9 Cells | H9_Cell_Line | ESC | PrimaryCulture | UCSD | CL | Female | NA | NA | SD | H9-01;H9-02;H9-04 | Class 1 | UCSD.H9.Input.SKH9-4.filt.*;UCSD.H9.Input.AK144.filt.*;UCSD.H9.Input.SK338.filt.* | UCSD.H9.H3K9me3.SK100.filt.*;UCSD.H9.H3K9me3.AK40.filt.*;UCSD.H9.H3K9me3.SK200.filt.* | UCSD.H9.H3K27me3.AK142.filt.*;UCSD.H9.H3K27me3.SK99.filt.* | UCSD.H9.H3K4me3.SK101.filt.*;UCSD.H9.H3K4me3.AK39.filt.* | UCSD.H9.H3K4me1.AK141.filt.*;UCSD.H9.H3K4me1.YL123.filt.* | UCSD.H9.H3K36me3.SK102.filt.*;UCSD.H9.H3K36me3.SK278.filt.* | UCSD.H9.H3K27ac.SK265.filt.*;UCSD.H9.H3K27ac.YL237.filt.* | UCSD.H9.H3K9ac.AK35.filt.*;UCSD.H9.H3K9ac.SK199.filt.* | UW.H9.ChromatinAccessibility.DS18522.filt.*;UW.H9.ChromatinAccessibility.DS18517.filt.* | E008 | E008 | 30000000 | 30000000 | 30000000 | 23380403 | 30000000 | 22676195 | 30000000 | 30000000 | 50000000 | 1.015472 | 1.05269 | 1.044539 | 2.094959 | 1.053461 | 1.069512 | 1.085212 | 1.119764 | 1.150014 | 0.4871047 | 0.3667573 | 0.8009209 | 1.284862 | 1.056783 | 0.8719653 | 1.09366 | 1.194623 | 1.02075 | UCSD.H9.H3K4me2.SK198.bed.gz;UCSD.H9.H3K4me2.AK38.bed.gz | UCSD.H9.H2AK5ac.SK193.bed.gz;UCSD.H9.H2AK5ac.AK28.bed.gz | UCSD.H9.H2BK120ac.SK378.bed.gz | UCSD.H9.H2BK5ac.YL244.bed.gz;UCSD.H9.H2BK5ac.AK29.bed.gz | UCSD.H9.H3K18ac.SK276.bed.gz;UCSD.H9.H3K18ac.SK375.bed.gz | UCSD.H9.H3K23ac.YL236.bed.gz;UCSD.H9.H3K23ac.SK289.bed.gz | UCSD.H9.H3K4ac.SK379.bed.gz;UCSD.H9.H3K4ac.SK328.bed.gz | UCSD.H9.H3K79me1.SK374.bed.gz;UCSD.H9.H3K79me1.SK329.bed.gz | UCSD.H9.H4K8ac.YL241.bed.gz;UCSD.H9.H4K8ac.SK283.bed.gz | UCSD.H9.H2BK12ac.AK30.bed.gz;UCSD.H9.H2BK12ac.AK112.bed.gz | UCSD.H9.H3K14ac.SK380.bed.gz;UCSD.H9.H3K14ac.AY15.bed.gz | UCSD.H9.H4K91ac.SK332.bed.gz;UCSD.H9.H4K91ac.SK287.bed.gz | UCSD.H9.H2A.Z.SK532.bed.gz | UCSD.H9.H2BK15ac.AY28.bed.gz;UCSD.H9.H2BK15ac.AK113.bed.gz;UCSD.H9.H2BK15ac.SK376.bed.gz | UCSD.H9.H3K79me2.AK143.bed.gz;UCSD.H9.H3K79me2.SK190.bed.gz | UCSD.H9.H2BK20ac.SK377.bed.gz | UCSD.H9.H3K56ac.SK279.bed.gz;UCSD.H9.H3K56ac.YL238.bed.gz | UCSD.H9.H4K20me1.SK286.bed.gz | UCSD.H9.H4K5ac.YL240.bed.gz;UCSD.H9.H4K5ac.SK282.bed.gz | UCSD.H9.H3K23me2.SK527.bed.gz;UCSD.H9.H3K23me2.SK277.bed.gz | UCSD.H9.H3T11ph.SK509.bed.gz | ||||||||||||
7 | Bad Methylation dataset. This epigenome is NOT to be used for DNA methylation analysis. All other data types are fine to use. | E001 | 4 | ESC | #924965 | ESC.I3 | 0 | 1 | 1 | 1 | 0 | ES-I3 Cells | ES-I3_Cell_Line | ESC | PrimaryCulture | BI | CL | Female | NA | NA | SD | 60;31436;35589;35592;35593;35594;40338;40339;40340;40585;40586;42133 | Class 4 | BI.ES-I3.Input.Lib_MC_20090522_07--ChIP_MC_20090519_07_hES_I3_TESR_WCE.filt.*;BI.ES-I3.Input.Solexa-10219.filt.* | BI.ES-I3.H3K9me3.Solexa-15475.filt.*;BI.ES-I3.H3K9me3.Solexa-12683-16494.filt.* | BI.ES-I3.H3K27me3.Solexa-10213-15380.filt.*;BI.ES-I3.H3K27me3.Solexa-12678.filt.* | BI.ES-I3.H3K4me3.Solexa-15474.filt.*;BI.ES-I3.H3K4me3.Solexa-12681.filt.* | BI.ES-I3.H3K4me1.Solexa-15382.filt.*;BI.ES-I3.H3K4me1.Lib_MC_20100211_02--ChIP_MC_20100208_02_hES_I3_TESR_H3K4Me1.filt.* | BI.ES-I3.H3K36me3.Solexa-15381.filt.*;BI.ES-I3.H3K36me3.Solexa-16493.filt.* | BI.ES-I3.H3K9ac.Solexa-12682.filt.*;BI.ES-I3.H3K9ac.Solexa-15383.filt.* | 30000000 | 30000000 | 18992710 | 21464084 | 30000000 | 20540560 | 23124747 | 1.019102 | 1.03983 | 1.10503 | 1.306581 | 1.084822 | 1.056173 | 1.439855 | 1.008519 | 0.5621554 | 1.277916 | 1.324472 | 1.317322 | 1.159956 | 1.407037 | ||||||||||||||||||||||||||||||||||||||||||
8 | E015 | 5 | ESC | #924965 | ESC.HUES6 | 1 | 1 | 1 | 1 | 0 | HUES6 Cells | HUES6_Cell_Line | ESC | PrimaryCulture | BI | CL | Female | NA | NA | SD | 199;207 | Class 5 | BI.HUES6.Input.Lib_XZ_20101004_14--ChIP_XZ_20100930_14_ES_cell_HUES_6_WCE.filt.*;BI.HUES6.Input.Lib_XZ_20101004_07--ChIP_XZ_20100930_07_ES_cell_HUES_6_WCE.filt.* | BI.HUES6.H3K9me3.Lib_XZ_20101004_06--ChIP_XZ_20100930_06_ES_cell_HUES_6_H3K9Me3.filt.*;BI.HUES6.H3K9me3.Lib_XZ_20101004_13--ChIP_XZ_20100930_13_ES_cell_HUES_6_H3K9Me3.filt.* | BI.HUES6.H3K27me3.Lib_XZ_20101004_04--ChIP_XZ_20100930_04_ES_cell_HUES_6_H3K27Me3.filt.*;BI.HUES6.H3K27me3.Lib_XZ_20101004_11--ChIP_XZ_20100930_11_ES_cell_HUES_6_H3K27Me3.filt.* | BI.HUES6.H3K4me3.Lib_XZ_20101004_09--ChIP_XZ_20100930_09_ES_cell_HUES_6_H3K4Me3.filt.*;BI.HUES6.H3K4me3.Lib_XZ_20101004_02--ChIP_XZ_20100930_02_ES_cell_HUES_6_H3K4Me3.filt.* | BI.HUES6.H3K4me1.Lib_XZ_20101004_01--ChIP_XZ_20100930_01_ES_cell_HUES_6_H3K4Me1.filt.*;BI.HUES6.H3K4me1.Lib_XZ_20101004_08--ChIP_XZ_20100930_08_ES_cell_HUES_6_H3K4Me1.filt.* | BI.HUES6.H3K36me3.Lib_XZ_20101004_03--ChIP_XZ_20100930_03_ES_cell_HUES_6_H3K36Me3.filt.*;BI.HUES6.H3K36me3.Lib_XZ_20101004_10--ChIP_XZ_20100930_10_ES_cell_HUES_6_H3K36Me3.filt.* | BI.HUES6.H3K27ac.DNA_Lib_835.filt.*;BI.HUES6.H3K27ac.DNA_Lib_837.filt.* | BI.HUES6.H3K9ac.Lib_XZ_20101004_12--ChIP_XZ_20100930_12_ES_cell_HUES_6_H3K9Ac.filt.* | E015 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 23540772 | 1.013392 | 1.060667 | 1.121754 | 1.828946 | 1.091061 | 1.045846 | 1.063357 | 1.561758 | 0.4686526 | 0.3653351 | 1.199467 | 1.304042 | 1.180163 | 0.744926 | 1.267703 | 1.482529 | ||||||||||||||||||||||||||||||||||||||
9 | E014 | 6 | ESC | #924965 | ESC.HUES48 | 1 | 1 | 1 | 1 | 1 | HUES48 Cells | HUES48_Cell_Line | ESC | PrimaryCulture | BI | CL | Female | NA | NA | SD | 197;201;BioSam_824 | Class 5 | BI.HUES48.Input.Lib_EpiLabSPL_Row_1725.filt.*;BI.HUES48.Input.Lib_EpiLabSPL_Row_1710.filt.* | BI.HUES48.H3K9me3.Lib_EpiLabSPL_Row_1718.filt.*;BI.HUES48.H3K9me3.Lib_EpiLabSPL_Row_1707.filt.* | BI.HUES48.H3K27me3.Lib_EpiLabSPL_Row_1716.filt.*;BI.HUES48.H3K27me3.Lib_MC_20101025_10--ChIP_MC_20101020_10_ES_cell_HUES_48_H3K27Me3.filt.* | BI.HUES48.H3K4me3.Lib_MC_20101025_08--ChIP_MC_20101020_08_ES_cell_HUES_48_H3K4Me3.filt.*;BI.HUES48.H3K4me3.Lib_EpiLabSPL_Row_1714.filt.* | BI.HUES48.H3K4me1.Lib_EpiLabSPL_Row_1713.filt.*;BI.HUES48.H3K4me1.Lib_MC_20101025_07--ChIP_MC_20101020_07_ES_cell_HUES_48_H3K4Me1.filt.* | BI.HUES48.H3K36me3.Lib_MC_20101025_09--ChIP_MC_20101020_09_ES_cell_HUES_48_H3K36Me3.filt.*;BI.HUES48.H3K36me3.Lib_EpiLabSPL_Row_1715.filt.* | BI.HUES48.H3K27ac.DNA_Lib_2068.filt.* | BI.HUES48.H3K9ac.Lib_EpiLabSPL_Row_1717.filt.*;BI.HUES48.H3K9ac.Lib_MC_20101025_11--ChIP_MC_20101020_11_ES_cell_HUES_48_H3K9Ac.filt.* | E014 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 18731798 | 30000000 | 1.008748 | 1.03742 | 1.082706 | 1.615021 | 1.072706 | 1.032388 | 1.680183 | 1.115558 | 0.3546921 | 0.2309522 | 1.000666 | 1.324561 | 1.197682 | 0.6655423 | 1.458499 | 1.594022 | ||||||||||||||||||||||||||||||||||||||
10 | E016 | 7 | ESC | #924965 | ESC.HUES64 | 1 | 1 | 1 | 1 | 1 | HUES64 Cells | HUES64_Cell_Line | ESC | PrimaryCulture | BI | CL | Male | NA | NA | SD | 196;202;BioSam_825 | Class 2 | BI.HUES64.Input.Lib_EpiLabSPL_Row_1709.filt.*;BI.HUES64.Input.Lib_EpiLabSPL_Row_1726.filt.* | BI.HUES64.H3K9me3.Lib_EpiLabSPL_Row_1724.filt.*;BI.HUES64.H3K9me3.Lib_MC_20101025_06--ChIP_MC_20101020_06_ES_cell_HUES_64_H3K9Me3.filt.* | BI.HUES64.H3K27me3.Lib_MC_20101025_04--ChIP_MC_20101020_04_ES_cell_HUES_64_H3K27Me3.filt.*;BI.HUES64.H3K27me3.Lib_EpiLabSPL_Row_1722.filt.* | BI.HUES64.H3K4me3.Lib_MC_20101025_02--ChIP_MC_20101020_02_ES_cell_HUES_64_H3K4Me3.filt.*;BI.HUES64.H3K4me3.Lib_EpiLabSPL_Row_1720.filt.* | BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.filt.*;BI.HUES64.H3K4me1.Lib_EpiLabSPL_Row_1719.filt.* | BI.HUES64.H3K36me3.Lib_MC_20101025_03--ChIP_MC_20101020_03_ES_cell_HUES_64_H3K36Me3.filt.*;BI.HUES64.H3K36me3.Lib_EpiLabSPL_Row_1721.filt.* | BI.HUES64.H3K27ac.DNA_Lib_834.filt.*;BI.HUES64.H3K27ac.DNA_Lib_2069.filt.* | BI.HUES64.H3K9ac.Lib_EpiLabSPL_Row_1723.filt.*;BI.HUES64.H3K9ac.Lib_MC_20101025_05--ChIP_MC_20101020_05_ES_cell_HUES_64_H3K9Ac.filt.* | BI.HUES64.mRNA-Seq.cDNA_Lib_18 | E016 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.011782 | 1.043049 | 1.104464 | 2.020673 | 1.07301 | 1.03975 | 1.203307 | 1.214554 | 0.4777247 | 0.2278852 | 1.089582 | 1.322739 | 1.201888 | 0.6976343 | 1.42505 | 1.555007 | |||||||||||||||||||||||||||||||||||||
11 | Outlier DNA methylation dataset (older platform) | E003 | 8 | ESC | #924965 | ESC.H1 | 1 | 1 | 1 | 1 | 1 | H1 Cells | H1_Cell_Line | ESC | PrimaryCulture | BI;UCSD;UCSF-UBC | CL | Male | NA | NA | SD | 56;68;69;27276;27277;35081;35082;35083;CDI-01;H1-07;H1-09;H1-10;H1-12;H1-13;hESC-01;HS0995;HS0998-1;HS1032-1;HS1345-1;HS1346-1;HS1347-1 | Class 1 | UCSD.H1.Input.YL328.filt.*;UCSD.H1.Input.DM219.filt.*;UCSD.H1.Input.LL-H1-I2.filt.*;UCSF-UBC.H1.Input.TOTAL-hEScd2-2.filt.*;UCSF-UBC.H1.Input.TOTAL-H1EScd1.filt.*;BI.H1.Input.Solexa-10531.filt.*;BI.H1.Input.Solexa-12532.filt.*;UCSD.H1.Input.LLH1U.filt.*;UCSD.H1.Input.LL-H1-I1.filt.*;UCSD.H1.Input.AK57.filt.*;UCSD.H1.Input.YL154.filt.*;UCSD.H1.Input.YL262.filt.*;UCSD.H1.Input.YL208.filt.* | UCSD.H1.H3K9me3.LL218.filt.*;BI.H1.H3K9me3.Solexa-12525.filt.*;UCSD.H1.H3K9me3.AK54.filt.*;UCSD.H1.H3K9me3.YL75.filt.*;UCSD.H1.H3K9me3.YL77.filt.*;UCSF-UBC.H1.H3K9me3.H1EScd1-me3K9-A.filt.*;UCSF-UBC.H1.H3K9me3.H1EScd2-me3K9-B.filt.* | BI.H1.H3K27me3.Solexa-8039.filt.*;UCSF-UBC.H1.H3K27me3.H1EScd1-me3K27-A.filt.*;UCSD.H1.H3K27me3.LL314.filt.*;UCSD.H1.H3K27me3.YL95.filt.*;UCSD.H1.H3K27me3.LL241.filt.*;BI.H1.H3K27me3.Solexa-12523.filt.* | UCSF-UBC.H1.H3K4me3.H1EScd1-me3K4-A.filt.*;UCSD.H1.H3K4me3.LL312.filt.*;BI.H1.H3K4me3.Solexa-12522.filt.*;UCSF-UBC.H1.H3K4me3.H1EScd2-me3K4-C.filt.*;UCSD.H1.H3K4me3.SAK67.filt.*;UCSD.H1.H3K4me3.LL227.filt.*;BI.H1.H3K4me3.Solexa-8038.filt.*;BI.H1.H3K4me3.Solexa-10398.filt.* | BI.H1.H3K4me1.Solexa-10529.filt.*;UCSF-UBC.H1.H3K4me1.H1EScd1-me1K4-D.filt.*;UCSD.H1.H3K4me1.LL228.filt.*;UCSD.H1.H3K4me1.LL311.filt.*;UCSD.H1.H3K4me1.YL131.filt.*;BI.H1.H3K4me1.Solexa-13061.filt.* | UCSF-UBC.H1.H3K36me3.H1EScd2-me3K36-B.filt.*;UCSD.H1.H3K36me3.SAK70.filt.*;UCSF-UBC.H1.H3K36me3.H1EScd1-me3K36-A.filt.*;UCSD.H1.H3K36me3.LL220.filt.*;BI.H1.H3K36me3.Solexa-14961.filt.*;BI.H1.H3K36me3.Solexa-12524.filt.*;UCSD.H1.H3K36me3.LL160.filt.* | UCSD.H1.H3K27ac.LL313.filt.*;UCSD.H1.H3K27ac.SAK270.filt.* | BI.H1.H3K9ac.Solexa-14962.filt.*;UCSF-UBC.H1.H3K9ac.H1EScd1-acK9-A.filt.*;UCSD.H1.H3K9ac.LL240.filt.*;UCSD.H1.H3K9ac.SAK68.filt.*;BI.H1.H3K9ac.Solexa-12526.filt.* | UW.H1.ChromatinAccessibility.DS19100.filt.*;UW.H1.ChromatinAccessibility.DS18873.filt.* | E003 | E003 | E003 | E003 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 21502554 | 30000000 | 50000000 | 1.02856 | 1.06007 | 1.173154 | 2.216037 | 1.071794 | 1.047651 | 1.221092 | 1.167936 | 1.346026 | 1.045886 | 0.4608144 | 1.272458 | 1.205567 | 1.096061 | 0.8214159 | 1.52665 | 1.25801 | 1.023913 | UCSD.H1.H3K4me2.LL322.bed.gz;UCSD.H1.H3K4me2.YL96.bed.gz | UCSD.H1.H2AK5ac.SAK201.bed.gz;UCSD.H1.H2AK5ac.YL97.bed.gz | UCSD.H1.H2BK120ac.SAK206.bed.gz;UCSD.H1.H2BK120ac.SK530.bed.gz;UCSD.H1.H2BK120ac.AK146.bed.gz | UCSD.H1.H2BK5ac.YL98.bed.gz;UCSD.H1.H2BK5ac.SAK202.bed.gz | UCSD.H1.H3K18ac.LL321.bed.gz;UCSD.H1.H3K18ac.SAK208.bed.gz | UCSD.H1.H3K23ac.AK59.bed.gz;UCSD.H1.H3K23ac.AK53.bed.gz | UCSD.H1.H3K4ac.AK51.bed.gz;UCSD.H1.H3K4ac.SAK207.bed.gz | UCSD.H1.H3K79me1.YL192.bed.gz;UCSD.H1.H3K79me1.YL82.bed.gz;UCSD.H1.H3K79me1.SAK73.bed.gz | UCSD.H1.H4K8ac.AY18.bed.gz;UCSD.H1.H4K8ac.AY17.bed.gz | UCSD.H1.H2BK12ac.YL93.bed.gz;UCSD.H1.H2BK12ac.SAK203.bed.gz | UCSD.H1.H3K14ac.AK58.bed.gz;UCSD.H1.H3K14ac.AK52.bed.gz | UCSD.H1.H4K91ac.SK303.bed.gz;UCSD.H1.H4K91ac.YL254.bed.gz | UCSD.H1.H2A.Z.AY1.bed.gz | UCSD.H1.H2BK15ac.YL206.bed.gz;UCSD.H1.H2BK15ac.SAK204.bed.gz | UCSD.H1.H3K79me2.SAK80.bed.gz;UCSD.H1.H3K79me2.YL204.bed.gz | UCSD.H1.H2BK20ac.YL207.bed.gz;UCSD.H1.H2BK20ac.SAK205.bed.gz | UCSD.H1.H3K56ac.SAK211.bed.gz;UCSD.H1.H3K56ac.SK300.bed.gz | UCSD.H1.H4K20me1.YL253.bed.gz;UCSD.H1.H4K20me1.SK529.bed.gz | UCSD.H1.H4K5ac.LL323.bed.gz;UCSD.H1.H4K5ac.SK302.bed.gz | UCSD.H1.H3K23me2.SAK210.bed.gz;UCSD.H1.H3K23me2.YL198.bed.gz | ||||||||||
12 | E024 | 9 | ESC | #924965 | ESC.4STAR | 1 | 1 | 1 | 0 | 0 | ES-UCSF4 Cells | 4star | ESC | PrimaryCulture | UCSF-UBC | CL | Female | NA | NA | SD | UCSF-4*_Cell_Line_hESC | Class 2 | UCSF-UBC.UCSF-4Star.Input.A19302.filt.* | UCSF-UBC.UCSF-4Star.H3K9me3.A19298.filt.* | UCSF-UBC.UCSF-4Star.H3K27me3.A19299.filt.* | UCSF-UBC.UCSF-4Star.H3K4me3.A19297.filt.* | UCSF-UBC.UCSF-4Star.H3K4me1.A19296.filt.* | UCSF-UBC.UCSF-4Star.H3K36me3.A19300.filt.* | E024 | E024 | 30000000 | 23716344 | 28279639 | 30000000 | 30000000 | 30000000 | 1.104143 | 1.134668 | 1.12512 | 1.331572 | 1.102216 | 1.085302 | 8.825757 | 1.606331 | 2.358132 | 1.437532 | 2.283974 | 1.817041 | |||||||||||||||||||||||||||||||||||||||||||||
13 | E020 | 10 | iPSC | #69608A | IPSC.20B | 1 | 0 | 1 | 1 | 0 | iPS-20b Cells | iPS-20b_Cell_Line | IPSC | PrimaryCulture | BI | CL | Male | NA | NA | SD | 66;67;BioSam_174 | Class 4 | BI.iPS-20b.Input.DNA_Lib_350.filt.*;BI.iPS-20b.Input.DNA_Lib_440.filt.*;BI.iPS-20b.Input.Solexa-10232.filt.*;BI.iPS-20b.Input.Lib_MC_20100119_07--ChIP_MC_20100113_07_hiPS-20b_WCE.filt.* | BI.iPS-20b.H3K9me3.Solexa-20765.filt.*;BI.iPS-20b.H3K9me3.DNA_Lib_351.filt.* | BI.iPS-20b.H3K27me3.DNA_Lib_356.filt.*;BI.iPS-20b.H3K27me3.Lib_MC_20100119_06--ChIP_MC_20100113_06_hiPS-20b_H3K27Me3.filt.*;BI.iPS-20b.H3K27me3.Solexa-15159.filt.* | BI.iPS-20b.H3K4me3.DNA_Lib_353.filt.*;BI.iPS-20b.H3K4me3.Lib_MC_20100119_05--ChIP_MC_20100113_05_hiPS-20b_H3K4Me3.filt.* | BI.iPS-20b.H3K4me1.DNA_Lib_354.filt.*;BI.iPS-20b.H3K4me1.Lib_MC_20100211_03--ChIP_MC_20100208_03_hiPS-20b_H3K4Me1.filt.* | BI.iPS-20b.H3K36me3.DNA_Lib_355.filt.*;BI.iPS-20b.H3K36me3.Solexa-20763.filt.* | BI.iPS-20b.H3K27ac.DNA_Lib_357.filt.* | BI.iPS-20b.H3K9ac.DNA_Lib_352.filt.*;BI.iPS-20b.H3K9ac.Solexa-20764.filt.* | E020 | 30000000 | 28347951 | 30000000 | 30000000 | 30000000 | 30000000 | 22466820 | 30000000 | 1.008708 | 1.049208 | 1.108528 | 1.404518 | 1.053836 | 1.034793 | 1.034491 | 1.130615 | 0.3610403 | 0.2286821 | 1.039805 | 1.258992 | 1.120416 | 0.6946507 | 1.076221 | 1.490698 | ||||||||||||||||||||||||||||||||||||||
14 | E019 | 11 | iPSC | #69608A | IPSC.18 | 1 | 0 | 1 | 1 | 0 | iPS-18 Cells | iPS-18_Cell_Line | IPSC | PrimaryCulture | BI | CL | Female | NA | NA | SD | 39791;46575;46576;46578;46579;46580;BioSam_173 | Class 4 | BI.iPS-18b.Input.Lib_MC_20090720_02--ChIP_MC_20090715_02_hiPS-18b_WCE.filt.*;BI.iPS-18c.Input.Lib_MC_20100108_07--ChIP_MC_20100105_07_hiPS-18c_WCE.filt.*;BI.iPS-18a.Input.DNA_Lib_342.filt.* | BI.iPS-18c.H3K9me3.Solexa-19774.filt.*;BI.iPS-18a.H3K9me3.DNA_Lib_343.filt.* | BI.iPS-18a.H3K27me3.DNA_Lib_348.filt.*;BI.iPS-18c.H3K27me3.Solexa-19791.filt.* | BI.iPS-18a.H3K4me3.DNA_Lib_345.filt.*;BI.iPS-18c.H3K4me3.Solexa-15173.filt.*;BI.iPS-18c.H3K4me3.Solexa-19747.filt.* | BI.iPS-18a.H3K4me1.DNA_Lib_346.filt.* | BI.iPS-18a.H3K36me3.DNA_Lib_347.filt.*;BI.iPS-18c.H3K36me3.Solexa-19808.filt.* | BI.iPS-18a.H3K27ac.DNA_Lib_349.filt.* | BI.iPS-18a.H3K9ac.DNA_Lib_344.filt.*;BI.iPS-18c.H3K9ac.Solexa-19756.filt.* | E019 | 30000000 | 27465155 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 27443132 | 1.009847 | 1.032982 | 1.124202 | 1.382586 | 1.070087 | 1.027561 | 1.028306 | 1.178299 | 0.3384143 | 0.2148157 | 1.077363 | 1.233747 | 1.190705 | 0.672645 | 1.190423 | 1.534179 | ||||||||||||||||||||||||||||||||||||||
15 | E018 | 12 | iPSC | #69608A | IPSC.15b | -1 | 1 | 0 | 0 | 0 | iPS-15b Cells | iPS-15b_Cell_Line | IPSC | PrimaryCulture | BI | CL | Female | NA | NA | SD | 62 | Class 5 | BI.iPS-15b.Input.Solexa-15157.filt.*;BI.iPS-15b.Input.Lib_MC_20100128_06--ChIP_MC_20100125_06_hiPS-15b_WCE.filt.* | BI.iPS-15b.H3K9me3.Solexa-20732.filt.* | BI.iPS-15b.H3K27me3.Lib_MC_20100128_05--ChIP_MC_20100125_05_hiPS-15b_H3K27Me3.filt.* | BI.iPS-15b.H3K4me3.Solexa-20743.filt.* | BI.iPS-15b.H3K4me1.Lib_MC_20100211_04--ChIP_MC_20100208_04_hiPS-15b_H3K4Me1.filt.* | BI.iPS-15b.H3K36me3.Solexa-20749.filt.* | BI.iPS-15b.H3K9ac.Solexa-20747.filt.* | E018 | 30000000 | 15444243 | 25989220 | 21079889 | 28103845 | 13388393 | 19039321 | 1.012633 | 1.062076 | 1.121047 | 1.427496 | 1.085542 | 1.040024 | 1.098859 | 0.3854824 | 0.3995239 | 1.172775 | 1.260064 | 1.387922 | 0.5393245 | 1.849376 | ||||||||||||||||||||||||||||||||||||||||||
16 | E021 | 13 | iPSC | #69608A | IPSC.DF.6.9 | 1 | 1 | 1 | 1 | 0 | iPS DF 6.9 Cells | iPS_DF_6.9_Cell_Line | IPSC | PrimaryCulture | UCSD | CL | Male | NA | NA | SD | iPS-6.9-01;iPS-6.9-02 | Class 2 | UCSD.iPS_DF_6.9.Input.SK445.filt.*;UCSD.iPS_DF_6.9.Input.SKiPS6.9-1.filt.* | UCSD.iPS_DF_6.9.H3K9me3.SK503.filt.*;UCSD.iPS_DF_6.9.H3K9me3.SK274.filt.* | UCSD.iPS_DF_6.9.H3K27me3.SK433.filt.*;UCSD.iPS_DF_6.9.H3K27me3.SK275.filt.* | UCSD.iPS_DF_6.9.H3K4me3.SK398.filt.*;UCSD.iPS_DF_6.9.H3K4me3.SK471.filt.* | UCSD.iPS_DF_6.9.H3K4me1.SK469.filt.*;UCSD.iPS_DF_6.9.H3K4me1.SK397.filt.* | UCSD.iPS_DF_6.9.H3K36me3.SK468.filt.*;UCSD.iPS_DF_6.9.H3K36me3.SK400.filt.* | UCSD.iPS_DF_6.9.H3K27ac.SK432.filt.* | UW.iPS_DF_6.9.ChromatinAccessibility.DS15164.filt.* | E021 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 27113934 | 26681306 | 1.033536 | 1.032865 | 1.049181 | 1.593082 | 1.063981 | 1.042467 | 1.055263 | 1.310136 | 0.6817973 | 0.7376668 | 0.9833084 | 1.15155 | 1.204754 | 0.8980237 | 1.154024 | 1.01023 | ||||||||||||||||||||||||||||||||||||||
17 | E022 | 14 | iPSC | #69608A | IPSC.DF.19.11 | 0 | 1 | 1 | 0 | 0 | iPS DF 19.11 Cells | iPS_DF_19.11_Cell_Line | IPSC | PrimaryCulture | UCSD | CL | Male | NA | NA | SD | iPS-19.11-01;iPS-19.11-02 | Class 2 | UCSD.iPS_DF_19.11.Input.SK446.filt.*;UCSD.iPS_DF_19.11.Input.SKiPS19.11-1.filt.* | UCSD.iPS_DF_19.11.H3K9me3.SK474.filt.*;UCSD.iPS_DF_19.11.H3K9me3.SK232.filt.* | UCSD.iPS_DF_19.11.H3K27me3.SK230.filt.*;UCSD.iPS_DF_19.11.H3K27me3.SK435.filt.* | UCSD.iPS_DF_19.11.H3K4me3.SK475.filt.*;UCSD.iPS_DF_19.11.H3K4me3.SK227.filt.* | UCSD.iPS_DF_19.11.H3K4me1.SK401.filt.*;UCSD.iPS_DF_19.11.H3K4me1.SK473.filt.* | UCSD.iPS_DF_19.11.H3K36me3.SK472.filt.* | UCSD.iPS_DF_19.11.H3K27ac.SK402.filt.*;UCSD.iPS_DF_19.11.H3K27ac.SK434.filt.*;UCSD.iPS_DF_19.11.H3K27ac.SK395.filt.* | UW.iPS_DF_19.11.ChromatinAccessibility.DS15153.filt.* | E022 | 25608432 | 30000000 | 30000000 | 30000000 | 30000000 | 17605510 | 30000000 | 26661713 | 1.053973 | 1.056057 | 1.038221 | 1.939102 | 1.07932 | 1.066955 | 1.074741 | 1.446759 | 1.394931 | 0.6162939 | 1.135747 | 1.160417 | 1.250032 | 0.9476187 | 1.256603 | 1.007757 | ||||||||||||||||||||||||||||||||||||||
18 | E007 | 15 | ES-deriv | #4178AE | ESDR.H1.NEUR.PROG | 1 | 0 | 1 | 0 | 0 | H1 Derived Neuronal Progenitor Cultured Cells | H1_Derived_Neuronal_Progenitor_Cultured_Cells | ESC_DERIVED | ESCDerived | UCSD | CL | Male | NA | NA | SD | NPC-03;NPC-04;NPC-05;NPC-06 | Class 1 | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.Input.AK222.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.Input.SK459.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.Input.SK506.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.Input.AK407.filt.* | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K9me3.AK244.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K9me3.AK200.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K9me3.CY27.filt.* | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK221.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK409.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.AK320.filt.* | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me3.AK199.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me3.CY26.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me3.LH12.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me3.AK243.filt.* | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK198.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.AK242.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.CY25.filt.* | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K36me3.AK202.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K36me3.CY23.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K36me3.AK241.filt.* | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK220.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.SK504.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK319.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.SK451.filt.*;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27ac.AK408.filt.* | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K9ac.AK263.filt.* | UW.H1_Derived_Neuronal_Progenitor_Cultured_Cells.ChromatinAccessibility.DS20153.filt.*;UW.H1_Derived_Neuronal_Progenitor_Cultured_Cells.ChromatinAccessibility.DS18739.filt.* | E007 | E007 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 50000000 | 1.019444 | 1.050861 | 1.025792 | 1.306518 | 1.063165 | 1.04233 | 1.070075 | 1.236056 | 1.273298 | 0.5124675 | 0.5054628 | 0.5160246 | 1.198543 | 0.9736956 | 0.7248916 | 0.9281059 | 1.162603 | 1.01436 | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me2.AK260.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2AK5ac.AK420.bed.gz;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2AK5ac.CY7.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK120ac.AK421.bed.gz;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK120ac.CY8.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK5ac.CY10.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K18ac.AK254.bed.gz;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K18ac.CY11.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K23ac.AK255.bed.gz;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K23ac.CY12.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4ac.AK386.bed.gz;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4ac.AK259.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K79me1.AK261.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H4K8ac.AK265.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK12ac.AK249.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H3K14ac.AK253.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H4K91ac.AK266.bed.gz | UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.AK422.bed.gz;UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.bed.gz | ||||||||||||||||||||
19 | E009 | 16 | ES-deriv | #4178AE | ESDR.H9.NEUR.PROG | 1 | 1 | 1 | 1 | 0 | H9 Derived Neuronal Progenitor Cultured Cells | H9_Derived_Neuronal_Progenitor_Cultured_Cells | ESC_DERIVED | ESCDerived | BI | CL | Female | NA | NA | SD | 113 | Class 5 | BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.Input.113.filt.* | BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K9me3.113.filt.* | BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K27me3.113.filt.* | BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me3.113.filt.* | BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K4me1.113.filt.* | BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H3K36me3.113.filt.* | E009 | 30000000 | 30000000 | 30000000 | 30000000 | 28071907 | 30000000 | 1.010948 | 1.030985 | 1.031866 | 1.753662 | 1.087162 | 1.040981 | 0.6859641 | 0.8080745 | 1.211686 | 1.076783 | 1.039184 | 0.8167426 | BI.H9_Derived_Neuronal_Progenitor_Cultured_Cells.H2A.Z.DNA_Lib_295.bed.gz | |||||||||||||||||||||||||||||||||||||||||||||
20 | E010 | 17 | ES-deriv | #4178AE | ESDR.H9.NEUR | 1 | 1 | 1 | 1 | 0 | H9 Derived Neuron Cultured Cells | H9_Derived_Neuron_Cultured_Cells | ESC_DERIVED | ESCDerived | BI | CL | Female | NA | NA | SD | 113 | Class 5 | BI.H9_Derived_Neuron_Cultured_Cells.Input.113.filt.* | BI.H9_Derived_Neuron_Cultured_Cells.H3K9me3.113.filt.* | BI.H9_Derived_Neuron_Cultured_Cells.H3K27me3.113.filt.* | BI.H9_Derived_Neuron_Cultured_Cells.H3K4me3.113.filt.* | BI.H9_Derived_Neuron_Cultured_Cells.H3K4me1.113.filt.* | BI.H9_Derived_Neuron_Cultured_Cells.H3K36me3.113.filt.* | E010 | 30000000 | 30000000 | 29590040 | 30000000 | 30000000 | 30000000 | 1.018273 | 1.032027 | 1.031621 | 1.709011 | 1.142163 | 1.042142 | 0.81757 | 0.8134967 | 0.8615358 | 1.113952 | 1.096145 | 0.8739415 | BI.H9_Derived_Neuron_Cultured_Cells.H2A.Z.DNA_Lib_294.bed.gz | |||||||||||||||||||||||||||||||||||||||||||||
21 | E013 | 18 | ES-deriv | #4178AE | ESDR.CD56.MESO | -1 | -1 | 0 | 0 | 0 | hESC Derived CD56+ Mesoderm Cultured Cells | hESC_Derived_CD56+_Mesoderm_Cultured_Cells | ESC_DERIVED | ESCDerived | BI | CL | Male | NA | NA | SD | BioSam_1249;BioSam_1250;BioSam_575;BioSam_577 | Class 2 | BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.Input.DNA_Lib_1317.filt.*;BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.Input.DNA_Lib_1318.filt.* | BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K9me3.DNA_Lib_3197.filt.*;BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K9me3.DNA_Lib_1276.filt.*;BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K9me3.DNA_Lib_1282.filt.* | BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27me3.DNA_Lib_1274.filt.* | BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K4me3.DNA_Lib_1273.filt.*;BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K4me3.DNA_Lib_1279.filt.* | BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K4me1.DNA_Lib_1272.filt.* | BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K36me3.DNA_Lib_1277.filt.*;BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K36me3.DNA_Lib_1283.filt.* | BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27ac.DNA_Lib_3198.filt.*;BI.hESC_Derived_CD56+_Mesoderm_Cultured_Cells.H3K27ac.DNA_Lib_3195.filt.* | E013 | E013 | 30000000 | 30000000 | 4322464 | 10585491 | 11179426 | 21204689 | 30000000 | 1.015228 | 1.037625 | 1.092709 | 2.422056 | 1.110664 | 1.040528 | 1.285047 | 0.3553006 | 0.2609434 | 0.6461858 | 1.312024 | 1.298653 | 0.7912681 | 1.462301 | |||||||||||||||||||||||||||||||||||||||||
22 | E012 | 19 | ES-deriv | #4178AE | ESDR.CD56.ECTO | -1 | 0 | 0 | 0 | 0 | hESC Derived CD56+ Ectoderm Cultured Cells | hESC_Derived_CD56+_Ectoderm_Cultured_Cells | ESC_DERIVED | ESCDerived | BI | CL | Male | NA | NA | SD | BioSam_1247;BioSam_1248;BioSam_707 | Class 2 | BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.Input.DNA_Lib_1812.filt.*;BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.Input.DNA_Lib_2066.filt.* | BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K9me3.DNA_Lib_1811.filt.*;BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K9me3.DNA_Lib_3192.filt.* | BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K27me3.DNA_Lib_3193.filt.*;BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K27me3.DNA_Lib_1807.filt.* | BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K4me3.DNA_Lib_1810.filt.*;BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K4me3.DNA_Lib_2073.filt.* | BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K4me1.DNA_Lib_1809.filt.* | BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K36me3.DNA_Lib_1808.filt.* | BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K27ac.DNA_Lib_3191.filt.*;BI.hESC_Derived_CD56+_Ectoderm_Cultured_Cells.H3K27ac.DNA_Lib_3194.filt.* | E012 | E012 | 30000000 | 18478765 | 18532506 | 17283261 | 13876103 | 14361584 | 17645625 | 1.007572 | 1.044287 | 1.120547 | 1.882602 | 1.077848 | 1.026098 | 1.184011 | 0.4086898 | 0.2113077 | 0.9945718 | 1.183628 | 1.001387 | 0.3365589 | 1.487385 | |||||||||||||||||||||||||||||||||||||||||
23 | E011 | 20 | ES-deriv | #4178AE | ESDR.CD184.ENDO | 1 | 0 | 1 | 1 | 1 | hESC Derived CD184+ Endoderm Cultured Cells | hESC_Derived_CD184+_Endoderm_Cultured_Cells | ESC_DERIVED | ESCDerived | BI | CL | Male | NA | NA | SD | 262;263 | Class 2 | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.Input.DNA_Lib_244.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.Input.DNA_Lib_264.filt.* | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K9me3.DNA_Lib_242.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K9me3.DNA_Lib_248.filt.* | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_239.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27me3.DNA_Lib_246.filt.* | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me3.DNA_Lib_241.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me3.DNA_Lib_247.filt.* | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_3190.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_249.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K4me1.DNA_Lib_2067.filt.* | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K36me3.DNA_Lib_263.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K36me3.DNA_Lib_842.filt.* | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3188.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.filt.* | BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K9ac.DNA_Lib_238.filt.*;BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K9ac.DNA_Lib_245.filt.* | E011 | E011 | E011 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.011677 | 1.043137 | 1.054631 | 1.189275 | 1.049217 | 1.027458 | 1.150636 | 1.117477 | 0.4288087 | 0.311873 | 0.9631636 | 1.02201 | 1.06273 | 0.6100472 | 1.477288 | 1.309177 | ||||||||||||||||||||||||||||||||||||
24 | E004 | 21 | ES-deriv | #4178AE | ESDR.H1.BMP4.MESO | 1 | 0 | 1 | 0 | 0 | H1 BMP4 Derived Mesendoderm Cultured Cells | H1_BMP4_Derived_Mesendoderm_Cultured_Cells | ESC_DERIVED | ESCDerived | UCSD | CL | Male | NA | NA | SD | BMP4-03;BMP4-04;BMP4-07;BMP4-08 | Class 1 | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.Input.AK318.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.Input.SK344.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.Input.AK312.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.Input.AK149.filt.* | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K9me3.SK526.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K9me3.AK136.filt.* | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27me3.AK311.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27me3.AK314.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27me3.AK132.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27me3.AK148.filt.* | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me3.AK135.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me3.AK165.filt.* | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me1.AK163.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me1.AK133.filt.* | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K36me3.AK137.filt.* | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.AK313.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.SK340.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.AK310.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K27ac.AK147.filt.* | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K9ac.AK128.filt.*;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K9ac.AK172.filt.* | UW.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.ChromatinAccessibility.DS19310.filt.*;UW.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.ChromatinAccessibility.DS18732.filt.* | E004 | E004 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 50000000 | 1.023133 | 1.032778 | 1.047138 | 1.138863 | 1.047834 | 1.027986 | 1.168355 | 1.198798 | 1.477072 | 0.9125951 | 0.6577608 | 1.151248 | 1.142175 | 1.276522 | 1.168752 | 1.281552 | 1.370963 | 1.017257 | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK164.bed.gz;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4me2.AK134.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2AK5ac.AK126.bed.gz;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2AK5ac.AK170.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK120ac.AK401.bed.gz;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK120ac.AK410.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK127.bed.gz;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK5ac.AK171.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K18ac.AK411.bed.gz;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K18ac.AK402.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K23ac.AK173.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K4ac.AK413.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K79me1.AK168.bed.gz;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K79me1.AK138.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H4K8ac.AK417.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK15ac.AK418.bed.gz;UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK15ac.AK419.bed.gz | UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H3K79me2.AK169.bed.gz | ||||||||||||||||||||||
25 | E005 | 22 | ES-deriv | #4178AE | ESDR.H1.BMP4.TROP | 1 | 1 | 1 | 1 | 1 | H1 BMP4 Derived Trophoblast Cultured Cells | H1_BMP4_Derived_Trophoblast_Cultured_Cells | ESC_DERIVED | ESCDerived | UCSD | CL | Male | NA | NA | SD | BMP4-05;BMP4-06;BMP4-09 | Class 1 | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.Input.SK458.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.Input.AK315.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.Input.SK457.filt.* | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K9me3.LH8.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K9me3.AY66.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K9me3.LH4.filt.* | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.AK317.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.SK448.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27me3.SK450.filt.* | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me3.LH6.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me3.LH2.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me3.AY65.filt.* | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.LH5.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.LH1.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.AY258.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me1.AY64.filt.* | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K36me3.AY259.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K36me3.AY67.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K36me3.LH7.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K36me3.LH3.filt.* | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27ac.SK447.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27ac.SK449.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K27ac.AK316.filt.* | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K9ac.SK496.filt.*;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K9ac.SK495.filt.* | UW.H1_BMP4_Derived_Trophoblast_Cultured_Cells.ChromatinAccessibility.DS19317.filt.*;UW.H1_BMP4_Derived_Trophoblast_Cultured_Cells.ChromatinAccessibility.DS18736.filt.* | E005 | E005 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 50000000 | 1.021022 | 1.100057 | 1.037762 | 1.71727 | 1.119173 | 1.113926 | 1.15716 | 1.046029 | 1.212016 | 0.5936837 | 0.8175056 | 0.5416801 | 1.293667 | 1.37003 | 1.348582 | 1.084254 | 0.7894944 | 1.017931 | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK498.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4me2.SK497.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2AK5ac.AY69.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2AK5ac.AY222.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK120ac.AY71.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK120ac.AY223.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY225.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK5ac.AY73.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K18ac.AY75.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K18ac.AY227.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K23ac.SK512.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K23ac.SK513.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4ac.AY228.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K4ac.AY200.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K79me1.AY229.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K79me1.AY201.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H4K8ac.AY205.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H4K8ac.AY233.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY224.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K14ac.AY226.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K14ac.AY74.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H4K91ac.AY206.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2A.Z.AY221.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2A.Z.AY68.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K79me2.AY202.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H3K79me2.AY230.bed.gz | UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H4K12ac.AY203.bed.gz;UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H4K12ac.AY231.bed.gz | ||||||||||||||||||
26 | E006 | 23 | ES-deriv | #4178AE | ESDR.H1.MSC | 1 | 1 | 1 | 1 | 1 | H1 Derived Mesenchymal Stem Cells | H1_Derived_Mesenchymal_Stem_Cells | ESC_DERIVED | ESCDerived | UCSD | CL | Male | NA | NA | SD | MSC-01;MSC-02 | Class 1 | UCSD.H1_Derived_Mesenchymal_Stem_Cells.Input.SK444.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.Input.SK443.filt.* | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K9me3.SK508.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K9me3.SK507.filt.* | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK437.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27me3.SK439.filt.* | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me3.SK463.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me3.SK467.filt.* | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me1.SK461.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me1.SK465.filt.* | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K36me3.SK464.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K36me3.SK460.filt.* | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27ac.SK438.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K27ac.SK436.filt.* | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K9ac.SK519.filt.*;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K9ac.SK518.filt.* | UW.H1_Derived_Mesenchymal_Stem_Cells.ChromatinAccessibility.DS20671.filt.*;UW.H1_Derived_Mesenchymal_Stem_Cells.ChromatinAccessibility.DS21042.filt.* | E006 | E006 | 30000000 | 30000000 | 30000000 | 20680231 | 30000000 | 30000000 | 30000000 | 30000000 | 50000000 | 1.027771 | 1.05181 | 1.040158 | 1.91911 | 1.154855 | 1.118857 | 1.180057 | 1.161708 | 2.130594 | 0.6014745 | 0.5725811 | 1.326475 | 1.19737 | 1.61333 | 1.40055 | 1.327205 | 1.783112 | 1.020898 | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me2.SK520.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4me2.SK521.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2AK5ac.SK522.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2AK5ac.SK523.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK120ac.AK395.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK516.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK5ac.SK517.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K18ac.AK283.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K18ac.AK272.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K23ac.AK273.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K23ac.AK284.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4ac.AK274.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K4ac.AK285.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K79me1.SK515.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K79me1.SK514.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H4K8ac.AK276.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H4K8ac.AK287.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK12ac.AK281.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK12ac.AK270.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K14ac.AK282.bed.gz;UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K14ac.AK378.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H4K91ac.AK277.bed.gz | UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2A.Z.AK278.bed.gz | ||||||||||||||||||||
27 | E062 | 24 | Blood & T-cell | #55A354 | BLD.PER.MONUC.PC | 1 | 0 | 1 | 1 | 0 | Primary mononuclear cells from peripheral blood | Peripheral_Blood_Mononuclear_Primary_Cells | BLOOD | PrimaryCell | UCSF-UBC | 28Y, 27Y | Male | LIQUID | Caucasian, Indian/Arabian | C | TC010;TC012 | Class 4 | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.Input.TC016.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.Input.TC010.HS2625.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.Input.TC010.HS2626.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.Input.TC015.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.Input.TC012.HS2743.filt.* | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K9me3.TC016.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K9me3.TC010.HS2622.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K9me3.TC015.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K9me3.TC012.HS2742.filt.* | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K27me3.TC010.HS2621.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K27me3.TC016.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K27me3.TC015.filt.* | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me3.TC015.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me3.TC016.filt.* | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me1.TC015.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K4me1.TC012.HS2745.filt.* | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K36me3.TC010.HS2624.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K36me3.TC015.filt.* | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K27ac.TC015.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K27ac.TC016.filt.* | UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K9ac.TC010.HS2623.filt.*;UCSF-UBC.Peripheral_Blood_Mononuclear_Primary_Cells.H3K9ac.TC012.HS2744.filt.* | E062 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.013761 | 1.024337 | 1.028379 | 1.301971 | 1.033045 | 1.074705 | 1.030845 | 1.083805 | 0.6215132 | 0.5062532 | 1.045112 | 1.19844 | 1.05413 | 1.207996 | 0.9641786 | 1.274211 | ||||||||||||||||||||||||||||||||||||||
28 | E034 | 25 | Blood & T-cell | #55A354 | BLD.CD3.PPC | -1 | 1 | 0 | 0 | 0 | Primary T cells from peripheral blood | CD3_Primary_Cells_Peripheral_UW | BLOOD | PrimaryCell | UW | 21Y, 37Y | Male | LIQUID | Caucasian, Hispanic | C | RO_01679;RO_01701 | Class 5 | UW.CD3_Primary_Cells.Input.RO_01701.Histone.DS21626.filt.* | UW.CD3_Primary_Cells.H3K9me3.RO_01679.Histone.DS22898.filt.* | UW.CD3_Primary_Cells.H3K27me3.RO_01679.Histone.DS22927.filt.* | UW.CD3_Primary_Cells.H3K4me3.RO_01701.Histone.DS21703.filt.* | UW.CD3_Primary_Cells.H3K4me1.RO_01679.Histone.DS22561.filt.* | UW.CD3_Primary_Cells.H3K36me3.RO_01679.Histone.DS22563.filt.* | UW.CD3_Primary_Cells.H3K27ac.RO_01701.Histone.DS21704.filt.* | UW.CD3_Primary_Cells.ChromatinAccessibility.RO_01679.DS17198.filt.*;UW.CD3_Primary_Cells.ChromatinAccessibility.RO_01701.DS17534.filt.* | 30000000 | 15811716 | 26362769 | 29358683 | 23290041 | 22795000 | 30000000 | 50000000 | 1.00788 | 1.049083 | 1.098694 | 2.035001 | 1.275101 | 1.038685 | 1.307078 | 1.84202 | 0.321554 | 0.238991 | 1.380351 | 1.328358 | 1.311634 | 0.753417 | 1.280095 | 1.012488 | |||||||||||||||||||||||||||||||||||||||
29 | E045 | 26 | Blood & T-cell | #55A354 | BLD.CD4.CD25I.CD127.TMEMPC | 1 | 0 | 1 | 1 | 1 | Primary T cells effector/memory enriched from peripheral blood | CD4+_CD25int_CD127+_Tmem_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 62;332 | Class 5 | BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.Input.Donor_332.filt.*;BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.Input.Donor_62.filt.* | BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K9me3.Donor_62.filt.*;BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K9me3.Donor_332.filt.* | BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27me3.Donor_62.filt.*;BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27me3.Donor_332.filt.* | BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K4me3.Donor_62.filt.*;BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K4me3.Donor_332.filt.* | BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K4me1.Donor_332.filt.*;BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K4me1.Donor_62.filt.* | BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K36me3.Donor_62.filt.*;BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K36me3.Donor_332.filt.* | BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_332.filt.*;BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_62.filt.* | 30000000 | 26489913 | 20213799 | 23906500 | 18274815 | 30000000 | 16066464 | 1.008939 | 1.022868 | 1.038699 | 1.230249 | 1.049316 | 1.022696 | 1.452487 | 0.3108387 | 0.2341535 | 0.7640862 | 1.06283 | 0.6404738 | 0.4861342 | 1.420366 | |||||||||||||||||||||||||||||||||||||||||||
30 | E033 | 27 | Blood & T-cell | #55A354 | BLD.CD3.CPC | -1 | 1 | 0 | 0 | 0 | Primary T cells from cord blood | CD3_Primary_Cells_Cord_BI | BLOOD | PrimaryCell | BI | Fetus (GW unknown) | Unknown | LIQUID | Unknown | C | CD3_39661;CD3_39804;CD3_39811;CD3_39840 | Class 3 | BI.CD3_Primary_Cells.Input.CD3_39661.filt.* | BI.CD3_Primary_Cells.H3K9me3.CD3_39840.filt.*;BI.CD3_Primary_Cells.H3K9me3.CD3_39811.filt.* | BI.CD3_Primary_Cells.H3K27me3.CD3_39804.filt.*;BI.CD3_Primary_Cells.H3K27me3.CD3_39661.filt.* | BI.CD3_Primary_Cells.H3K4me3.CD3_39661.filt.*;BI.CD3_Primary_Cells.H3K4me3.CD3_39804.filt.* | BI.CD3_Primary_Cells.H3K4me1.CD3_39811.filt.*;BI.CD3_Primary_Cells.H3K4me1.CD3_39840.filt.* | BI.CD3_Primary_Cells.H3K36me3.CD3_39804.filt.*;BI.CD3_Primary_Cells.H3K36me3.CD3_39661.filt.* | UW.CD3_Primary_Cells.ChromatinAccessibility.CB6_1-4-2011.DS17706.filt.*;UW.CD3_Primary_Cells.ChromatinAccessibility.CB1_1-3-2011.DS17702.filt.* | E033 | 6976206 | 14292311 | 21861431 | 15496888 | 14506208 | 20743473 | 42421955 | 1.034783 | 1.064754 | 1.03023 | 1.445556 | 1.114658 | 1.053138 | 1.977931 | 0.4090314 | 0.2323248 | 0.7711013 | 1.105498 | 0.9098405 | 0.9248716 | 1.017284 | ||||||||||||||||||||||||||||||||||||||||||
31 | E044 | 28 | Blood & T-cell | #55A354 | BLD.CD4.CD25.CD127M.TREGPC | 1 | 0 | 1 | 0 | 0 | Primary T regulatory cells from peripheral blood | CD4+_CD25+_CD127-_Treg_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 62;332 | Class 5 | BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.Input.Donor_62.filt.*;BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.Input.Donor_332.filt.* | BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K9me3.Donor_332.filt.*;BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K9me3.Donor_62.filt.* | BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27me3.Donor_62.filt.*;BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27me3.Donor_332.filt.* | BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K4me3.Donor_62.filt.*;BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K4me3.Donor_332.filt.* | BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K4me1.Donor_62.filt.*;BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K4me1.Donor_332.filt.* | BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K36me3.Donor_332.filt.*;BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K36me3.Donor_62.filt.* | BI.CD4+_CD25+_CD127-_Treg_Primary_Cells.H3K27ac.Donor_62.filt.* | 30000000 | 30000000 | 30000000 | 15079580 | 17251849 | 29367051 | 8349932 | 1.007237 | 1.023857 | 1.019893 | 2.011119 | 1.089111 | 1.031649 | 1.827391 | 0.2811996 | 0.2482156 | 0.6311402 | 1.278002 | 0.9296513 | 0.6109805 | 1.551171 | |||||||||||||||||||||||||||||||||||||||||||
32 | E043 | 29 | Blood & T-cell | #55A354 | BLD.CD4.CD25M.TPC | 1 | 0 | 1 | 0 | 0 | Primary T helper cells from peripheral blood | CD4+_CD25-_Th_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 62;332 | Class 5 | BI.CD4+_CD25-_Th_Primary_Cells.Input.Donor_62.filt.*;BI.CD4+_CD25-_Th_Primary_Cells.Input.Donor_332.filt.* | BI.CD4+_CD25-_Th_Primary_Cells.H3K9me3.Donor_332.filt.*;BI.CD4+_CD25-_Th_Primary_Cells.H3K9me3.Donor_62.filt.* | BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_332.filt.*;BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_62.filt.* | BI.CD4+_CD25-_Th_Primary_Cells.H3K4me3.Donor_332.filt.*;BI.CD4+_CD25-_Th_Primary_Cells.H3K4me3.Donor_62.filt.* | BI.CD4+_CD25-_Th_Primary_Cells.H3K4me1.Donor_332.filt.*;BI.CD4+_CD25-_Th_Primary_Cells.H3K4me1.Donor_62.filt.* | BI.CD4+_CD25-_Th_Primary_Cells.H3K36me3.Donor_332.filt.*;BI.CD4+_CD25-_Th_Primary_Cells.H3K36me3.Donor_62.filt.* | BI.CD4+_CD25-_Th_Primary_Cells.H3K27ac.Donor_332.filt.* | 30000000 | 30000000 | 30000000 | 15739497 | 23864916 | 30000000 | 16749018 | 1.009001 | 1.022957 | 1.018063 | 1.847919 | 1.090143 | 1.027716 | 1.121611 | 0.3324468 | 0.2629367 | 0.6382523 | 1.282965 | 0.9420349 | 0.6106405 | 1.196661 | |||||||||||||||||||||||||||||||||||||||||||
33 | E039 | 30 | Blood & T-cell | #55A354 | BLD.CD4.CD25M.CD45RA.NPC | 1 | 0 | 1 | 1 | 1 | Primary T helper naive cells from peripheral blood | CD4+_CD25-_CD45RA+_Naive_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 62;332 | Class 5 | BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.Input.Donor_332.filt.*;BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.Input.Donor_62.filt.* | BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K9me3.Donor_332.filt.*;BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K9me3.Donor_62.filt.* | BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_332.filt.*;BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27me3.Donor_62.filt.* | BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me3.Donor_332.filt.*;BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me3.Donor_62.filt.* | BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me1.Donor_332.filt.*;BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K4me1.Donor_62.filt.* | BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K36me3.Donor_332.filt.*;BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K36me3.Donor_62.filt.* | BI.CD4+_CD25-_CD45RA+_Naive_Primary_Cells.H3K27ac.Donor_62.filt.* | 30000000 | 30000000 | 23952515 | 22287960 | 30000000 | 30000000 | 13028034 | 1.008958 | 1.015169 | 1.022453 | 1.41053 | 1.065673 | 1.025527 | 1.693245 | 0.3288928 | 0.248155 | 0.4499522 | 1.125377 | 0.8929112 | 0.5488114 | 1.516045 | |||||||||||||||||||||||||||||||||||||||||||
34 | E041 | 31 | Blood & T-cell | #55A354 | BLD.CD4.CD25M.IL17M.PL.TPC | 1 | 0 | 1 | 1 | 1 | Primary T helper cells PMA-I stimulated | CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 62;332 | Class 5 | BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.Input.Donor_62.filt.*;BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.Input.Donor_332.filt.* | BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K9me3.Donor_332.filt.*;BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K9me3.Donor_62.filt.* | BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K27me3.Donor_332.filt.*;BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K27me3.Donor_62.filt.* | BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me3.Donor_62.filt.*;BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me3.Donor_332.filt.* | BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_332.filt.*;BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K4me1.Donor_62.filt.* | BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K36me3.Donor_62.filt.*;BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K36me3.Donor_332.filt.* | BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K27ac.Donor_62.filt.*;BI.CD4+_CD25-_IL17-_PMA-Ionomycin_stimulated_MACS_purified_Th_Primary_Cells.H3K27ac.Donor_332.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.009435 | 1.018389 | 1.026091 | 1.233465 | 1.078165 | 1.026602 | 1.369392 | 0.3546716 | 0.3178799 | 0.7729941 | 1.128609 | 1.025982 | 0.6397694 | 1.454734 | |||||||||||||||||||||||||||||||||||||||||||
35 | E042 | 32 | Blood & T-cell | #55A354 | BLD.CD4.CD25M.IL17P.PL.TPC | 1 | 0 | 1 | 0 | 0 | Primary T helper 17 cells PMA-I stimulated | CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 62;332 | Class 5 | BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.Input.Donor_332.filt.*;BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.Input.Donor_62.filt.* | BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K9me3.Donor_62.filt.*;BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K9me3.Donor_332.filt.* | BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K27me3.Donor_62.filt.*;BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K27me3.Donor_332.filt.* | BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K4me3.Donor_62.filt.*;BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K4me3.Donor_332.filt.* | BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K4me1.Donor_62.filt.*;BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K4me1.Donor_332.filt.* | BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K36me3.Donor_332.filt.*;BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K36me3.Donor_62.filt.* | BI.CD4+_CD25-_IL17+_PMA-Ionomcyin_stimulated_Th17_Primary_Cells.H3K27ac.Donor_62.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 18697770 | 1.009685 | 1.015634 | 1.017067 | 1.180032 | 1.068585 | 1.028713 | 1.665535 | 0.3784474 | 0.2667683 | 0.543336 | 1.140017 | 0.9938727 | 0.6348867 | 1.507155 | |||||||||||||||||||||||||||||||||||||||||||
36 | E040 | 33 | Blood & T-cell | #55A354 | BLD.CD4.CD25M.CD45RO.MPC | 1 | 0 | 1 | 1 | 1 | Primary T helper memory cells from peripheral blood 1 | CD4+_CD25-_CD45RO+_Memory_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 62;332 | Class 5 | BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.Input.Donor_62.filt.*;BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.Input.Donor_332.filt.* | BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K9me3.Donor_62.filt.*;BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K9me3.Donor_332.filt.* | BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27me3.Donor_62.filt.*;BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27me3.Donor_332.filt.* | BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K4me3.Donor_332.filt.*;BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K4me3.Donor_62.filt.* | BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K4me1.Donor_332.filt.*;BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K4me1.Donor_62.filt.* | BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K36me3.Donor_332.filt.*;BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K36me3.Donor_62.filt.* | BI.CD4+_CD25-_CD45RO+_Memory_Primary_Cells.H3K27ac.Donor_62.filt.* | 30000000 | 27340291 | 30000000 | 17101591 | 19489837 | 25486830 | 8607710 | 1.009944 | 1.023929 | 1.022083 | 1.096899 | 1.088288 | 1.021762 | 1.428698 | 0.2230796 | 0.2226611 | 0.7093381 | 0.8053919 | 0.9637591 | 0.4583401 | 1.509835 | |||||||||||||||||||||||||||||||||||||||||||
37 | E037 | 34 | Blood & T-cell | #55A354 | BLD.CD4.MPC | 1 | 0 | 1 | 0 | 0 | Primary T helper memory cells from peripheral blood 2 | CD4_Memory_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 20;Donor_100_7_pooled_leukopaks_Jan_7_2011;Donor_101_8_pooled_leukopaks_Jan_20_2011 | Class 4 | BI.CD4_Memory_Primary_Cells.Input.20.filt.*;BI.CD4_Memory_Primary_Cells.Input.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD4_Memory_Primary_Cells.Input.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD4_Memory_Primary_Cells.H3K9me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD4_Memory_Primary_Cells.H3K9me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Memory_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD4_Memory_Primary_Cells.H3K4me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Memory_Primary_Cells.H3K4me3.20.filt.*;BI.CD4_Memory_Primary_Cells.H3K4me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD4_Memory_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD4_Memory_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD4_Memory_Primary_Cells.H3K36me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Memory_Primary_Cells.H3K36me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD4_Memory_Primary_Cells.H3K27ac.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD4_Memory_Primary_Cells.H3K27ac.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | E037 | E037 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 27666693 | 1.009844 | 1.016303 | 1.017268 | 1.074598 | 1.070702 | 1.015455 | 1.346558 | 0.3746558 | 0.2866455 | 0.5079467 | 0.8607921 | 0.9490877 | 0.5075205 | 1.410534 | |||||||||||||||||||||||||||||||||||||||||
38 | E048 | 35 | Blood & T-cell | #55A354 | BLD.CD8.MPC | 1 | 0 | 1 | 0 | 0 | Primary T CD8+ memory cells from peripheral blood | CD8_Memory_Primary_Cells | BLOOD | PrimaryCell | BI | Unknown | Unknown | LIQUID | Unknown | C | 100_7_pooled_leukopaks_Jan_7_2011;101_8_pooled_leukopaks_Jan_20_2011 | Class 5 | BI.CD8_Memory_Primary_Cells.Input.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Memory_Primary_Cells.Input.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD8_Memory_Primary_Cells.H3K9me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD8_Memory_Primary_Cells.H3K9me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD8_Memory_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Memory_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD8_Memory_Primary_Cells.H3K4me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Memory_Primary_Cells.H3K4me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD8_Memory_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Memory_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD8_Memory_Primary_Cells.H3K36me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD8_Memory_Primary_Cells.H3K36me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD8_Memory_Primary_Cells.H3K27ac.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 13923505 | 1.012231 | 1.017156 | 1.017111 | 1.056899 | 1.048787 | 1.016945 | 1.242585 | 0.3687085 | 0.3067866 | 0.5187735 | 0.9124779 | 0.8688469 | 0.4688785 | 1.441976 | |||||||||||||||||||||||||||||||||||||||||||
39 | E038 | 36 | Blood & T-cell | #55A354 | BLD.CD4.NPC | 1 | 0 | 1 | 0 | 0 | Primary T helper naive cells from peripheral blood | CD4_Naive_Primary_Cells | BLOOD | PrimaryCell | BI;UCSF-UBC | Unknown | Mixed | LIQUID | Unknown | C | Donor_100_7_pooled_leukopaks_Jan_7_2011;Donor_101_8_pooled_leukopaks_Jan_20_2011;TC001 | Class 4 | BI.CD4_Naive_Primary_Cells.Input.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD4_Naive_Primary_Cells.Input.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD4_Naive_Primary_Cells.H3K9me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD4_Naive_Primary_Cells.H3K9me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD4_Naive_Primary_Cells.H3K4me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Naive_Primary_Cells.H3K4me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD4_Naive_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Naive_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | UCSF-UBC.CD4_Naive_Primary_Cells.H3K36me3.TC001.filt.*;BI.CD4_Naive_Primary_Cells.H3K36me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Naive_Primary_Cells.H3K36me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | BI.CD4_Naive_Primary_Cells.H3K27ac.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD4_Naive_Primary_Cells.H3K27ac.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | UCSF-UBC.CD4_Naive_Primary_Cells.H3K9ac.TC001.filt.* | E038 | E038 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 11693164 | 4657202 | 1.01284 | 1.017843 | 1.019397 | 1.102847 | 1.05895 | 1.018056 | 1.685273 | 1.301597 | 0.4067735 | 0.2789143 | 0.5043458 | 1.044512 | 0.8778194 | 0.4851666 | 1.579626 | 1.971716 | |||||||||||||||||||||||||||||||||||||
40 | E047 | 37 | Blood & T-cell | #55A354 | BLD.CD8.NPC | 1 | 0 | 1 | 0 | 0 | Primary T CD8+ naive cells from peripheral blood | CD8_Naive_Primary_Cells | BLOOD | PrimaryCell | BI;UCSF-UBC | Unknown | Mixed | LIQUID | Unknown | C | Donor_100_7_pooled_leukopaks_Jan_7_2011;Donor_101_8_pooled_leukopaks_Jan_20_2011;TC001;TC010 | Class 4 | UCSF-UBC.CD8_Naive_Primary_Cells.Input.TC001.filt.*;BI.CD8_Naive_Primary_Cells.Input.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;BI.CD8_Naive_Primary_Cells.Input.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD8_Naive_Primary_Cells.H3K9me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Naive_Primary_Cells.H3K9me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;UCSF-UBC.CD8_Naive_Primary_Cells.H3K9me3.TC001.filt.* | BI.CD8_Naive_Primary_Cells.H3K27me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Naive_Primary_Cells.H3K27me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;UCSF-UBC.CD8_Naive_Primary_Cells.H3K27me3.TC001.filt.* | BI.CD8_Naive_Primary_Cells.H3K4me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me3.TC001.filt.*;BI.CD8_Naive_Primary_Cells.H3K4me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me3.TC010.filt.* | BI.CD8_Naive_Primary_Cells.H3K4me1.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Naive_Primary_Cells.H3K4me1.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;UCSF-UBC.CD8_Naive_Primary_Cells.H3K4me1.TC001.filt.* | BI.CD8_Naive_Primary_Cells.H3K36me3.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.*;UCSF-UBC.CD8_Naive_Primary_Cells.H3K36me3.TC001.filt.*;BI.CD8_Naive_Primary_Cells.H3K36me3.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.* | BI.CD8_Naive_Primary_Cells.H3K27ac.Donor_100_7_pooled_leukopaks_Jan_7_2011.filt.*;BI.CD8_Naive_Primary_Cells.H3K27ac.Donor_101_8_pooled_leukopaks_Jan_20_2011.filt.* | UCSF-UBC.CD8_Naive_Primary_Cells.H3K9ac.TC001.filt.* | E047 | E047 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 14693961 | 1.012974 | 1.01838 | 1.021032 | 1.245716 | 1.062117 | 1.016424 | 1.298483 | 1.12462 | 0.4490624 | 0.3287289 | 0.6967738 | 1.245805 | 0.9983958 | 0.5031821 | 1.458005 | 2.332949 | |||||||||||||||||||||||||||||||||||||
41 | E029 | 38 | HSC & B-cell | #678C69 | BLD.CD14.PC | 1 | 1 | 1 | 1 | 1 | Primary monocytes from peripheral blood | CD14_Primary_Cells | BLOOD | PrimaryCell | UW | 21Y, 37Y | Male | LIQUID | Hispanic, Unknown | C | RO_01701;RO_01721 | Class 5 | UW.CD14_Primary_Cells.Input.RO_01701.Histone.DS21627.filt.* | UW.CD14_Primary_Cells.H3K9me3.RO_01721.Histone.DS22404.filt.* | UW.CD14_Primary_Cells.H3K27me3.RO_01721.Histone.DS22405.filt.* | UW.CD14_Primary_Cells.H3K4me3.RO_01701.Histone.DS21707.filt.* | UW.CD14_Primary_Cells.H3K4me1.RO_01721.Histone.DS22403.filt.* | UW.CD14_Primary_Cells.H3K36me3.RO_01721.Histone.DS22406.filt.* | UW.CD14_Primary_Cells.H3K27ac.RO_01721.Histone.DS22926.filt.* | UW.CD14_Primary_Cells.ChromatinAccessibility.RO_01689.DS17391.filt.*;UW.CD14_Primary_Cells.ChromatinAccessibility.RO_01701.DS17889.filt.* | 20538113 | 25333602 | 22730312 | 20973878 | 30000000 | 20505089 | 21286511 | 47268789 | 1.015574 | 1.168838 | 1.059034 | 2.309022 | 1.296727 | 1.047474 | 1.841996 | 2.161229 | 0.3277705 | 0.8117208 | 0.9138664 | 1.371705 | 1.226491 | 0.7371682 | 1.52922 | 1.014303 | |||||||||||||||||||||||||||||||||||||||
42 | E031 | 39 | HSC & B-cell | #678C69 | BLD.CD19.CPC | -1 | 1 | 0 | 0 | 0 | Primary B cells from cord blood | CD19_Primary_Cells_Cord_BI | BLOOD | PrimaryCell | BI | Fetus (GW unknown) | Mixed | LIQUID | Unknown | C | 130;CD19_12/22/08;CD19_12/29/08;CD19_2/20/09;CD19_6/26/08;CD19_8/1/08 | Class 4 | BI.CD19_Primary_Cells.Input.CD19_8_1_08.filt.* | BI.CD19_Primary_Cells.H3K9me3.CD19_2_20_09.filt.*;BI.CD19_Primary_Cells.H3K9me3.CD19_12_29_08.filt.* | BI.CD19_Primary_Cells.H3K27me3.CD19_6_26_08.filt.*;BI.CD19_Primary_Cells.H3K27me3.CD19_12_22_08.filt.* | BI.CD19_Primary_Cells.H3K4me3.CD19_12_22_08.filt.*;BI.CD19_Primary_Cells.H3K4me3.CD19_8_1_08.filt.* | BI.CD19_Primary_Cells.H3K4me1.130.filt.* | BI.CD19_Primary_Cells.H3K36me3.CD19_8_1_08.filt.*;BI.CD19_Primary_Cells.H3K36me3.CD19_12_29_08.filt.* | E031 | 5082252 | 13943470 | 20840272 | 12954668 | 8036019 | 14915361 | 1.035262 | 1.068844 | 1.032288 | 1.507494 | 1.229659 | 1.045032 | 0.3334073 | 0.2496224 | 1.202674 | 1.156743 | 1.244893 | 0.9267074 | ||||||||||||||||||||||||||||||||||||||||||||||
43 | E035 | 40 | HSC & B-cell | #678C69 | BLD.CD34.PC | -1 | 1 | 0 | 0 | 0 | Primary hematopoietic stem cells | CD34_Primary_Cells | BLOOD | PrimaryCell | BI | Fetus (GW unknown) | Unknown | LIQUID | Unknown | C | CD34_39629;CD34_39661;CD34_39804;CD34_39811;CD34_39889 | Class 4 | BI.CD34_Primary_Cells.Input.CD34_39661.filt.* | BI.CD34_Primary_Cells.H3K9me3.CD34_39811.filt.*;BI.CD34_Primary_Cells.H3K9me3.CD34_39889.filt.* | BI.CD34_Primary_Cells.H3K27me3.CD34_39804.filt.*;BI.CD34_Primary_Cells.H3K27me3.CD34_39661.filt.* | BI.CD34_Primary_Cells.H3K4me3.CD34_39629.filt.*;BI.CD34_Primary_Cells.H3K4me3.CD34_39804.filt.* | BI.CD34_Primary_Cells.H3K4me1.CD34_39889.filt.*;BI.CD34_Primary_Cells.H3K4me1.CD34_39811.filt.* | BI.CD34_Primary_Cells.H3K36me3.CD34_39811.filt.*;BI.CD34_Primary_Cells.H3K36me3.CD34_39661.filt.* | E035 | 8809704 | 14536824 | 16737779 | 10711857 | 18886104 | 14619986 | 1.028913 | 1.095339 | 1.031991 | 1.57012 | 1.130835 | 1.039387 | 0.4822335 | 0.3461211 | 0.8059515 | 1.125669 | 1.190572 | 0.8872744 | ||||||||||||||||||||||||||||||||||||||||||||||
44 | E051 | 41 | HSC & B-cell | #678C69 | BLD.MOB.CD34.PC.M | 1 | 1 | 1 | 1 | 0 | Primary hematopoietic stem cells G-CSF-mobilized Male | Mobilized_CD34_Primary_Cells_Male | BLOOD | PrimaryCell | BI | 42Y | Male | LIQUID | Caucasian | SD | RO_01562 | Class 3 | BI.Mobilized_CD34_Primary_Cells.Input.RO_01562.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K9me3.RO_01562.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01562.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K4me3.RO_01562.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01562.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K36me3.RO_01562.filt.* | UW.Mobilized_CD34_Primary_Cells.ChromatinAccessibility.RO_01562.DS13196.filt.* | E051 | 29874758 | 24606120 | 30000000 | 27644389 | 30000000 | 27890075 | 43764509 | 1.006002 | 1.068004 | 1.048246 | 2.004569 | 1.228632 | 1.068612 | 1.990056 | 0.2395521 | 0.502255 | 0.9815441 | 1.077612 | 1.122694 | 0.9000433 | 1.005405 | ||||||||||||||||||||||||||||||||||||||||||
45 | E050 | 42 | HSC & B-cell | #678C69 | BLD.MOB.CD34.PC.F | 1 | 0 | 1 | 0 | 0 | Primary hematopoietic stem cells G-CSF-mobilized Female | Mobilized_CD34_Primary_Cells_Female | BLOOD | PrimaryCell | BI | Fetus (GW unknown) | Mixed | LIQUID | Unknown | C | RO_01480;RO_01508;RO_01536;RO_01549;UW_RO_01480 | Class 2 | BI.Mobilized_CD34_Primary_Cells.Input.Mobilized_CD34_5_28_09.filt.*;BI.Mobilized_CD34_Primary_Cells.Input.RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.Input.RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.Input.RO_01549.filt.*;BI.Mobilized_CD34_Primary_Cells.Input.UW_RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.Input.UW_RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.Input.UW_RO_01549.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K9me3.Mobilized_CD34_5_28_09.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K9me3.RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K9me3.UW_RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K9me3.UW_RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K9me3.UW_RO_01549.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K27me3.Mobilized_CD34_5_28_09.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K27me3.RO_01549.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K27me3.UW_RO_01549.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K4me3.Mobilized_CD34_5_28_09.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K4me3.UW_RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K4me3.UW_RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K4me3.UW_RO_01549.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K4me1.Mobilized_CD34_5_28_09.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K4me1.RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K4me1.UW_RO_01549.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K36me3.Mobilized_CD34_5_28_09.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K36me3.RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K36me3.RO_01549.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K36me3.UW_RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K36me3.UW_RO_01536.filt.* | BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01480.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01536.filt.*;BI.Mobilized_CD34_Primary_Cells.H3K27ac.RO_01549.filt.* | UW.Mobilized_CD34_Primary_Cells.ChromatinAccessibility.RO_01480.DS12771.filt.*;UW.Mobilized_CD34_Primary_Cells.ChromatinAccessibility.RO_01508.DS11202.filt.*;UW.Mobilized_CD34_Primary_Cells.ChromatinAccessibility.RO_01536.DS12336.filt.*;UW.Mobilized_CD34_Primary_Cells.ChromatinAccessibility.RO_01536.DS12339.filt.*;UW.Mobilized_CD34_Primary_Cells.ChromatinAccessibility.RO_01549.DS12734.filt.* | E050 | E050 | E050 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 27469261 | 50000000 | 1.008122 | 1.036912 | 1.025241 | 1.566959 | 1.151463 | 1.030945 | 1.32509 | 2.380408 | 0.4328877 | 0.3379111 | 0.6173542 | 1.15585 | 1.058321 | 0.6724507 | 1.477717 | 1.005372 | ||||||||||||||||||||||||||||||||||||
46 | E036 | 43 | HSC & B-cell | #678C69 | BLD.CD34.CC | 0 | 1 | 1 | 1 | 0 | Primary hematopoietic stem cells short term culture | CD34_Cultured_Cells | BLOOD | PrimaryCell | BI | Fetus (GW unknown) | Unknown | LIQUID | Unknown | C | 123;cultured_CD34_2_20_09 | Class 5 | BI.CD34_Cultured_Cells.Input.123.filt.* | BI.CD34_Cultured_Cells.H3K9me3.123.filt.*;BI.CD34_Cultured_Cells.H3K9me3.cultured_CD34_2_20_09.filt.* | BI.CD34_Cultured_Cells.H3K27me3.cultured_CD34_2_20_09.filt.* | BI.CD34_Cultured_Cells.H3K4me3.cultured_CD34_2_20_09.filt.*;BI.CD34_Cultured_Cells.H3K4me3.123.filt.* | BI.CD34_Cultured_Cells.H3K4me1.cultured_CD34_2_20_09.filt.*;BI.CD34_Cultured_Cells.H3K4me1.123.filt.* | BI.CD34_Cultured_Cells.H3K36me3.cultured_CD34_2_20_09.filt.*;BI.CD34_Cultured_Cells.H3K36me3.123.filt.* | 27825398 | 26103738 | 11911610 | 30000000 | 30000000 | 30000000 | 1.012669 | 1.052994 | 1.046051 | 1.387995 | 1.095431 | 1.04424 | 0.4321471 | 0.295881 | 1.040936 | 1.076561 | 1.073446 | 0.8306072 | |||||||||||||||||||||||||||||||||||||||||||||||
47 | E032 | 44 | HSC & B-cell | #678C69 | BLD.CD19.PPC | 1 | 0 | 1 | 1 | 1 | Primary B cells from peripheral blood | CD19_Primary_Cells_Peripheral_UW | BLOOD | PrimaryCell | UW | 21Y, 37Y | Male | LIQUID | Caucasian, Hispanic | C | RO_01679;RO_01701 | Class 5 | UW.CD19_Primary_Cells.Input.RO_01701.Histone.DS21628.filt.* | UW.CD19_Primary_Cells.H3K9me3.RO_01679.Histone.DS22899.filt.* | UW.CD19_Primary_Cells.H3K27me3.RO_01679.Histone.DS22585.filt.* | UW.CD19_Primary_Cells.H3K4me3.RO_01701.Histone.DS21711.filt.* | UW.CD19_Primary_Cells.H3K4me1.RO_01679.Histone.DS22584.filt.* | UW.CD19_Primary_Cells.H3K36me3.RO_01679.Histone.DS22586.filt.* | UW.CD19_Primary_Cells.H3K27ac.RO_01701.Histone.DS21712.filt.* | UW.CD19_Primary_Cells.ChromatinAccessibility.RO_01701.DS17440.filt.*;UW.CD19_Primary_Cells.ChromatinAccessibility.RO_01679.DS17186.filt.* | 29763728 | 30000000 | 22790761 | 25182460 | 29388415 | 22973371 | 21597113 | 50000000 | 1.00641 | 1.025658 | 1.015418 | 1.830908 | 1.21963 | 1.027839 | 1.529516 | 1.608931 | 0.2390889 | 0.385778 | 0.5276616 | 1.371692 | 1.15804 | 0.620663 | 1.332035 | 1.004582 | |||||||||||||||||||||||||||||||||||||||
48 | E046 | 45 | HSC & B-cell | #678C69 | BLD.CD56.PC | 1 | 0 | 1 | 1 | 1 | Primary Natural Killer cells from peripheral blood | CD56_Primary_Cells | BLOOD | PrimaryCell | UW | 21Y, 37Y | Male | LIQUID | Caucasian, Hispanic | C | RO_01679;RO_01701 | Class 5 | UW.CD56_Primary_Cells.Input.RO_01701.Histone.DS21629.filt.* | UW.CD56_Primary_Cells.H3K9me3.RO_01679.Histone.DS22900.filt.* | UW.CD56_Primary_Cells.H3K27me3.RO_01679.Histone.DS22594.filt.* | UW.CD56_Primary_Cells.H3K4me3.RO_01701.Histone.DS21715.filt.* | UW.CD56_Primary_Cells.H3K4me1.RO_01679.Histone.DS22593.filt.* | UW.CD56_Primary_Cells.H3K36me3.RO_01679.Histone.DS22595.filt.* | UW.CD56_Primary_Cells.H3K27ac.RO_01701.Histone.DS21716.filt.* | UW.CD56_Primary_Cells.ChromatinAccessibility.RO_01701.DS17443.filt.*;UW.CD56_Primary_Cells.ChromatinAccessibility.RO_01679.DS17189.filt.* | 25203628 | 16243150 | 28109323 | 21939444 | 22437596 | 30000000 | 26447569 | 50000000 | 1.017984 | 1.096045 | 1.015951 | 2.020982 | 1.337392 | 1.028773 | 1.64756 | 1.94111 | 0.4234319 | 0.5841889 | 0.6013604 | 1.37453 | 1.371809 | 0.6795754 | 1.301504 | 1.001964 | |||||||||||||||||||||||||||||||||||||||
49 | E030 | 46 | HSC & B-cell | #678C69 | BLD.CD15.PC | -1 | 1 | 0 | 0 | 0 | Primary neutrophils from peripheral blood | CD15_Primary_Cells | BLOOD | PrimaryCell | BI | Fetus (GW unknown) | Male | LIQUID | Unknown | SD | 23 | Class 5 | BI.CD15_Primary_Cells.Input.23.filt.* | BI.CD15_Primary_Cells.H3K9me3.23.filt.* | BI.CD15_Primary_Cells.H3K27me3.23.filt.* | BI.CD15_Primary_Cells.H3K4me3.23.filt.* | BI.CD15_Primary_Cells.H3K4me1.23.filt.* | BI.CD15_Primary_Cells.H3K36me3.23.filt.* | E030 | 27121937 | 24338419 | 10454083 | 7134392 | 30000000 | 22327666 | 1.030433 | 1.04019 | 1.096024 | 2.212845 | 1.17756 | 1.089713 | 1.122943 | 0.3976158 | 1.265224 | 1.269693 | 1.138271 | 1.192552 | ||||||||||||||||||||||||||||||||||||||||||||||
50 | E026 | 47 | Mesench | #B65C73 | STRM.MRW.MSC | 1 | 0 | 1 | 0 | 0 | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells | STROMAL_CONNECTIVE | PrimaryCulture | BI | 57Y, unknown, unkown, unkown | Unknown | SOLID | Unknown | SD | 57;58;59;60 | Class 5 | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.59.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.60.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.57.filt.* | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.59.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.60.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.57.filt.* | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.57.filt.* | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.59.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.57.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.60.filt.* | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.59.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.60.filt.* | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.59.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.60.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.57.filt.* | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.60.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.59.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.57.filt.* | BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.57.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.58.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.60.filt.*;BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.59.filt.* | E026 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.008619 | 1.0193 | 1.020677 | 1.493746 | 1.108574 | 1.028488 | 1.688742 | 1.267119 | 0.3514761 | 0.3217958 | 0.7741366 | 1.274408 | 1.183206 | 0.7032415 | 1.636011 | 1.466489 | ||||||||||||||||||||||||||||||||||||||
51 | E049 | 48 | Mesench | #B65C73 | STRM.CHON.MRW.DR.MSC | 1 | 0 | 1 | 1 | 1 | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells | STROMAL_CONNECTIVE | PrimaryCulture | BI | Unknown | Unknown | SOLID | Unknown | C | 57;58;59;60 | Class 5 | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.57.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.59.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.60.filt.* | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.59.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.57.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.60.filt.* | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.57.filt.* | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.57.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.60.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.59.filt.* | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.59.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.60.filt.* | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.57.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.60.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.59.filt.* | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.57.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.59.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.60.filt.* | BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.57.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.60.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.58.filt.*;BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.59.filt.* | E049 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.008299 | 1.024225 | 1.022505 | 1.711695 | 1.149106 | 1.03251 | 1.566107 | 1.266173 | 0.3750138 | 0.3084017 | 0.8418214 | 1.296271 | 1.205873 | 0.6732906 | 1.762373 | 1.467369 | ||||||||||||||||||||||||||||||||||||||
52 | E025 | 49 | Mesench | #B65C73 | FAT.ADIP.DR.MSC | 1 | 1 | 1 | 1 | 0 | Adipose Derived Mesenchymal Stem Cell Cultured Cells | Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells | FAT | PrimaryCulture | BI | 31Y, 59Y, 41Y | Female | SOLID | Unknown | C | 1;92;93 | Class 5 | BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.92.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.1.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.93.filt.* | BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.92.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.1.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.93.filt.* | BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.1.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.92.filt.* | BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.1.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.92.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.93.filt.* | BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.93.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.1.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.92.filt.* | BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.92.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.93.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.1.filt.* | BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.92.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.93.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.1.2.filt.*;BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.1.3.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.008742 | 1.023957 | 1.025388 | 1.400769 | 1.126999 | 1.038715 | 1.291292 | 0.3964733 | 0.3901202 | 0.8647286 | 1.205706 | 1.204536 | 0.8218699 | 1.394402 | |||||||||||||||||||||||||||||||||||||||||||
53 | E023 | 50 | Mesench | #B65C73 | FAT.MSC.DR.ADIP | 1 | 1 | 1 | 1 | 0 | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells | FAT | PrimaryCulture | BI | CL | Female | NA | NA | SD | 92;93 | Class 5 | BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.Input.92.filt.*;BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.Input.93.filt.* | BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K9me3.92.filt.*;BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K9me3.93.filt.* | BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K27me3.92.filt.*;BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K27me3.93.filt.* | BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me3.93.filt.*;BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me3.92.filt.* | BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.93.filt.*;BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K4me1.92.filt.* | BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K36me3.92.filt.*;BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K36me3.93.filt.* | BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K9ac.92.filt.*;BI.Mesenchymal_Stem_Cell_Derived_Adipocyte_Cultured_Cells.H3K9ac.93.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.009462 | 1.040965 | 1.0282 | 1.408579 | 1.104018 | 1.043872 | 1.291481 | 0.4070881 | 0.5379158 | 0.9821309 | 1.244474 | 1.240022 | 0.9093761 | 1.452548 | |||||||||||||||||||||||||||||||||||||||||||
54 | E052 | 51 | Myosat | #E67326 | MUS.SAT | 1 | 0 | 1 | 0 | 0 | Muscle Satellite Cultured Cells | Muscle_Satellite_Cultured_Cells | MUSCLE | PrimaryCulture | BI | Unknown | Unknown | SOLID | Unknown | C | hSKM-1;hSKM-2;hSKM-3 | Class 5 | BI.Muscle_Satellite_Cultured_Cells.Input.hSKM-2.filt.*;BI.Muscle_Satellite_Cultured_Cells.Input.hSKM-3.filt.*;BI.Muscle_Satellite_Cultured_Cells.Input.hSKM-1.filt.* | BI.Muscle_Satellite_Cultured_Cells.H3K9me3.hSKM-1.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K9me3.hSKM-2.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K9me3.hSKM-3.filt.* | BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-1.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-3.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K27me3.hSKM-2.filt.* | BI.Muscle_Satellite_Cultured_Cells.H3K4me3.hSKM-1.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K4me3.hSKM-3.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K4me3.hSKM-2.filt.* | BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-1.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-2.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K4me1.hSKM-3.filt.* | BI.Muscle_Satellite_Cultured_Cells.H3K36me3.hSKM-2.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K36me3.hSKM-3.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K36me3.hSKM-1.filt.* | BI.Muscle_Satellite_Cultured_Cells.H3K9ac.hSKM-1.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K9ac.hSKM-2.filt.*;BI.Muscle_Satellite_Cultured_Cells.H3K9ac.hSKM-3.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.010442 | 1.018869 | 1.023488 | 1.513742 | 1.180253 | 1.021814 | 1.623316 | 0.3518433 | 0.3057824 | 0.8812532 | 1.323026 | 1.284923 | 0.5998925 | 1.633035 | BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-1.bed.gz;BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-3.bed.gz;BI.Muscle_Satellite_Cultured_Cells.H3K4me2.hSKM-2.bed.gz | ||||||||||||||||||||||||||||||||||||||||||
55 | E055 | 52 | Epithelial | #FF9D0C | SKIN.PEN.FRSK.FIB.01 | 1 | 1 | 1 | 1 | 1 | Foreskin Fibroblast Primary Cells skin01 | Penis_Foreskin_Fibroblast_Primary_Cells_skin01 | SKIN | PrimaryCulture | UCSF-UBC | 0Y | Male | SOLID | Unknown | SD | skin01 | Class 3 | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.Input.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K9me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K36me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27ac.skin01.filt.* | UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin01.DS18229.filt.*;UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin01.DS18224.filt.* | E055 | E055 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 27122965 | 50000000 | 1.010878 | 1.056939 | 1.035671 | 1.681174 | 1.066995 | 1.034498 | 1.268958 | 2.999699 | 1.216712 | 1.222948 | 1.120966 | 1.122194 | 1.200993 | 0.9898622 | 2.142128 | 1.007841 | |||||||||||||||||||||||||||||||||||||
56 | E056 | 53 | Epithelial | #FF9D0C | SKIN.PEN.FRSK.FIB.02 | 1 | 0 | 1 | 0 | 0 | Foreskin Fibroblast Primary Cells skin02 | Penis_Foreskin_Fibroblast_Primary_Cells_skin02 | SKIN | PrimaryCulture | UCSF-UBC | 0Y | Male | SOLID | Unknown | SD | skin02 | Class 3 | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.Input.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K9me3.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27me3.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me3.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K36me3.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27ac.skin02.filt.* | UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin02.DS18256.filt.*;UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin02.DS18252.filt.* | E056 | E056 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 28351221 | 50000000 | 1.010136 | 1.026652 | 1.026942 | 1.583036 | 1.033807 | 1.03591 | 1.186783 | 3.404881 | 1.280882 | 0.9576256 | 1.186749 | 1.153517 | 1.140068 | 1.1186 | 2.515895 | 1.026636 | |||||||||||||||||||||||||||||||||||||
57 | E059 | 54 | Epithelial | #FF9D0C | SKIN.PEN.FRSK.MEL.01 | 1 | 0 | 1 | 0 | 0 | Foreskin Melanocyte Primary Cells skin01 | Penis_Foreskin_Melanocyte_Primary_Cells_skin01 | SKIN | PrimaryCulture | UCSF-UBC | 0Y | Male | SOLID | Unknown | SD | skin01 | Class 3 | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.Input.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K9me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me1.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K36me3.skin01.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27ac.skin01.filt.* | UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin01.DS18601.filt.*;UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin01.DS18590.filt.* | E059 | E059 | 15680694 | 20445766 | 30000000 | 20064844 | 29536082 | 30000000 | 30000000 | 50000000 | 1.011048 | 1.039906 | 1.034369 | 1.740108 | 1.030581 | 1.019012 | 1.113442 | 1.9098 | 0.9803977 | 0.9453137 | 1.465756 | 1.2059 | 1.169289 | 0.9194574 | 2.976173 | 1.06014 | |||||||||||||||||||||||||||||||||||||
58 | E061 | 55 | Epithelial | #FF9D0C | SKIN.PEN.FRSK.MEL.03 | 1 | 1 | 1 | 1 | 1 | Foreskin Melanocyte Primary Cells skin03 | Penis_Foreskin_Melanocyte_Primary_Cells_skin03 | SKIN | PrimaryCulture | UCSF-UBC | 0Y | Male | SOLID | Unknown | SD | skin03 | Class 4 | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.Input.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K9me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me1.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K36me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27ac.skin03.filt.* | E061 | E061 | 30000000 | 25015133 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.063896 | 1.101058 | 1.079776 | 2.092077 | 1.098359 | 1.073091 | 1.175711 | 4.339358 | 1.878076 | 2.876011 | 1.170983 | 1.588041 | 1.777572 | 1.741099 | |||||||||||||||||||||||||||||||||||||||||
59 | E057 | 56 | Epithelial | #FF9D0C | SKIN.PEN.FRSK.KER.02 | -1 | 1 | 0 | 0 | 0 | Foreskin Keratinocyte Primary Cells skin02 | Penis_Foreskin_Keratinocyte_Primary_Cells_skin02 | SKIN | PrimaryCulture | UCSF-UBC | 0Y | Male | SOLID | Unknown | SD | skin02 | Class 2 | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.Input.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K9me3.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me3.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me1.skin02.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K36me3.skin02.filt.* | UW.Penis_Foreskin_Keratinocyte_Primary_Cells.ChromatinAccessibility.skin02.DS18718.filt.*;UW.Penis_Foreskin_Keratinocyte_Primary_Cells.ChromatinAccessibility.skin02.DS18714.filt.* | E057 | E057 | 15483267 | 9888165 | 29784474 | 24525728 | 26736934 | 21936760 | 50000000 | 1.01029 | 1.063644 | 1.064485 | 2.114419 | 1.078599 | 1.052402 | 1.880649 | 0.8221587 | 0.677884 | 1.776234 | 1.179882 | 1.198199 | 1.140808 | 1.050392 | |||||||||||||||||||||||||||||||||||||||||
60 | E058 | 57 | Epithelial | #FF9D0C | SKIN.PEN.FRSK.KER.03 | 1 | 1 | 1 | 1 | 1 | Foreskin Keratinocyte Primary Cells skin03 | Penis_Foreskin_Keratinocyte_Primary_Cells_skin03 | SKIN | PrimaryCulture | UCSF-UBC | 0Y | Male | SOLID | Unknown | SD | skin03 | Class 2 | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.Input.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K9me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me1.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K36me3.skin03.filt.* | UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27ac.skin03.filt.* | E058 | E058 | E058 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.088613 | 1.065952 | 1.061785 | 1.96731 | 1.099567 | 1.048525 | 1.112192 | 7.07969 | 1.703787 | 2.197642 | 1.206347 | 1.493083 | 1.162838 | 1.619301 | ||||||||||||||||||||||||||||||||||||||||
61 | E028 | 58 | Epithelial | #FF9D0C | BRST.HMEC.35 | -1 | 1 | 0 | 0 | 0 | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast_vHMEC | BREAST | PrimaryCulture | UCSF-UBC | 18Y | Female | SOLID | Caucasian | SD | RM035 | Class 3 | UCSF-UBC.Breast_vHMEC.Input.RM035.HS2620.filt.*;UCSF-UBC.Breast_vHMEC.Input.RM035.HS1995.filt.* | UCSF-UBC.Breast_vHMEC.H3K9me3.RM035.HS2617.filt.* | UCSF-UBC.Breast_vHMEC.H3K27me3.RM035.filt.* | UCSF-UBC.Breast_vHMEC.H3K4me3.RM035.HS2615.filt.* | UCSF-UBC.Breast_vHMEC.H3K4me1.RM035.HS2618.filt.*;UCSF-UBC.Breast_vHMEC.H3K4me1.RM035.HS1994.filt.* | UCSF-UBC.Breast_vHMEC.H3K36me3.RM035.filt.* | UW.Breast_vHMEC.ChromatinAccessibility.RM035.DS18406.filt.*;UW.Breast_vHMEC.ChromatinAccessibility.RM035.DS18438.filt.* | E028 | E028 | 30000000 | 16619959 | 16918735 | 6978187 | 30000000 | 30000000 | 50000000 | 1.009032 | 1.035223 | 1.081756 | 2.083322 | 1.07714 | 1.037193 | 1.633475 | 0.4490405 | 0.5693217 | 1.729418 | 1.316266 | 1.119243 | 1.343706 | 1.048031 | |||||||||||||||||||||||||||||||||||||||||
62 | Bad SBS DNA Methylation dataset. mCRF DNA Methylation data is fine. | E027 | 59 | Epithelial | #FF9D0C | BRST.MYO | 1 | 1 | 1 | 1 | 0 | Breast Myoepithelial Primary Cells | Breast_Myoepithelial_Cells | BREAST | PrimaryCell | UCSF-UBC | 36Y,33Y | Female | SOLID | African-American, African-American | C | RM066;RM080 | Class 2 | UCSF-UBC.Breast_Myoepithelial_Cells.Input.RM066.filt.*;UCSF-UBC.Breast_Myoepithelial_Cells.Input.RM080.filt.* | UCSF-UBC.Breast_Myoepithelial_Cells.H3K9me3.RM080.filt.*;UCSF-UBC.Breast_Myoepithelial_Cells.H3K9me3.RM066.filt.* | UCSF-UBC.Breast_Myoepithelial_Cells.H3K27me3.RM066.filt.*;UCSF-UBC.Breast_Myoepithelial_Cells.H3K27me3.RM080.filt.* | UCSF-UBC.Breast_Myoepithelial_Cells.H3K4me3.RM066.filt.*;UCSF-UBC.Breast_Myoepithelial_Cells.H3K4me3.RM080.filt.* | UCSF-UBC.Breast_Myoepithelial_Cells.H3K4me1.RM066.filt.*;UCSF-UBC.Breast_Myoepithelial_Cells.H3K4me1.RM080.filt.* | UCSF-UBC.Breast_Myoepithelial_Cells.H3K36me3.RM080.filt.*;UCSF-UBC.Breast_Myoepithelial_Cells.H3K36me3.RM066.filt.* | UCSF-UBC.Breast_Myoepithelial_Cells.H3K9ac.RM080.filt.*;UCSF-UBC.Breast_Myoepithelial_Cells.H3K9ac.RM066.filt.* | E027 | E027 | 30000000 | 23321153 | 29089725 | 17962840 | 30000000 | 30000000 | 23387974 | 1.016458 | 1.076867 | 1.04047 | 1.765833 | 1.07095 | 1.037635 | 1.05596 | 0.7504963 | 0.5558011 | 0.7951981 | 1.155123 | 1.093996 | 0.9221814 | 1.012656 | ||||||||||||||||||||||||||||||||||||||||
63 | E054 | 60 | Neurosph | #FFD924 | BRN.GANGEM.DR.NRSPHR | 1 | 0 | 1 | 1 | 0 | Ganglion Eminence derived primary cultured neurospheres | Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived | BRAIN | PrimaryCulture | UCSF-UBC | 17GW | Female | SOLID | Unknown | SD | HuFNSC02 | Class 2 | UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.Input.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K9me3.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K27me3.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me3.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K4me1.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.H3K36me3.HuFNSC02.filt.* | E054 | E054 | E054 | 21500129 | 21615461 | 30000000 | 18829032 | 30000000 | 30000000 | 1.016547 | 1.035112 | 1.010125 | 2.191954 | 1.03636 | 1.015138 | 0.9392978 | 0.4489255 | 0.6325916 | 1.13414 | 0.9563039 | 0.5890297 | ||||||||||||||||||||||||||||||||||||||||||||
64 | E053 | 61 | Neurosph | #FFD924 | BRN.CRTX.DR.NRSPHR | -1 | 0 | 0 | 0 | 0 | Cortex derived primary cultured neurospheres | Neurosphere_Cultured_Cells_Cortex_Derived | BRAIN | PrimaryCulture | UCSF-UBC | 17GW | Female | SOLID | Unknown | SD | HuFNSC02 | Class 4 | UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.Input.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K9me3.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K27me3.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K4me3.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K4me1.HuFNSC02.filt.* | UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.H3K36me3.HuFNSC02.filt.* | E053 | E053 | E053 | 20350092 | 15968390 | 30000000 | 17668724 | 30000000 | 30000000 | 1.013412 | 1.046412 | 1.02243 | 2.36626 | 1.068251 | 1.015516 | 0.7715916 | 0.4168121 | 1.014766 | 1.192318 | 1.03076 | 0.5746279 | ||||||||||||||||||||||||||||||||||||||||||||
65 | E112 | 62 | Thymus | #DAB92E | THYM | 0 | 1 | 1 | 0 | 0 | Thymus | Thymus | THYMUS | PrimaryTissue | UCSD | 3Y | Male | SOLID | Caucasian/African American | SD | STL001 | Class 2 | UCSD.Thymus.Input.STL001.filt.* | UCSD.Thymus.H3K9me3.STL001.filt.* | UCSD.Thymus.H3K27me3.STL001.filt.* | UCSD.Thymus.H3K4me3.STL001.filt.* | UCSD.Thymus.H3K4me1.STL001.filt.* | UCSD.Thymus.H3K36me3.STL001.filt.* | UCSD.Thymus.H3K27ac.STL001.filt.* | E112 | E112 | 13609638 | 26208477 | 26930743 | 26648758 | 15644994 | 26192104 | 16921101 | 1.033103 | 1.061088 | 1.024834 | 1.942656 | 1.061134 | 1.078009 | 1.27381 | 0.7267564 | 0.978345 | 1.055241 | 1.201432 | 0.9079151 | 1.184036 | 1.22547 | |||||||||||||||||||||||||||||||||||||||||
66 | E093 | 63 | Thymus | #DAB92E | THYM.FET | -1 | 1 | 0 | 0 | 0 | Fetal Thymus | Fetal_Thymus | THYMUS | PrimaryTissue | UW | 15GW | Female | SOLID | Unknown | SD | H-24644 | Class 5 | UW.Fetal_Thymus.Input.H-24644.Histone.DS21508.filt.* | UW.Fetal_Thymus.H3K9me3.H-24644.Histone.DS22904.filt.* | UW.Fetal_Thymus.H3K27me3.H-24644.Histone.DS22602.filt.* | UW.Fetal_Thymus.H3K4me3.H-24644.Histone.DS21539.filt.* | UW.Fetal_Thymus.H3K4me1.H-24644.Histone.DS22601.filt.* | UW.Fetal_Thymus.H3K36me3.H-24644.Histone.DS22603.filt.* | UW.Fetal_Thymus.H3K27ac.H-24644.Histone.DS21783.filt.* | UW.Fetal_Thymus.ChromatinAccessibility.H-24259.DS19287.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-23964.DS17876.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-23833.DS17474.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-23964.DS17875.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-24078.DS18382.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-24409.DS20341.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-23589.DS16490.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-23663.DS16841.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-24401.DS20335.filt.*;UW.Fetal_Thymus.ChromatinAccessibility.H-23769.DS17323.filt.* | 30000000 | 14802364 | 28332002 | 25524279 | 21287106 | 27691776 | 30000000 | 50000000 | 1.005608 | 1.073221 | 1.023873 | 1.839937 | 1.193274 | 1.033881 | 1.281364 | 1.495641 | 0.3164374 | 0.6188845 | 0.8039469 | 1.313158 | 1.348912 | 0.8538356 | 1.178795 | 1.022584 | |||||||||||||||||||||||||||||||||||||||
67 | E071 | 64 | Brain | #C5912B | BRN.HIPP.MID | 1 | 0 | 1 | 1 | 1 | Brain Hippocampus Middle | Brain_Hippocampus_Middle | BRAIN | PrimaryTissue | BI | 81Y, 73Y | Male | SOLID | Unknown | C | 149;150 | Class 2 | BI.Brain_Hippocampus_Middle.Input.150.filt.*;BI.Brain_Hippocampus_Middle.Input.149.filt.* | BI.Brain_Hippocampus_Middle.H3K9me3.149.filt.*;BI.Brain_Hippocampus_Middle.H3K9me3.150.filt.* | BI.Brain_Hippocampus_Middle.H3K27me3.150.filt.*;BI.Brain_Hippocampus_Middle.H3K27me3.149.filt.* | BI.Brain_Hippocampus_Middle.H3K4me3.150.filt.*;BI.Brain_Hippocampus_Middle.H3K4me3.149.filt.* | BI.Brain_Hippocampus_Middle.H3K4me1.150.filt.*;BI.Brain_Hippocampus_Middle.H3K4me1.149.filt.* | BI.Brain_Hippocampus_Middle.H3K36me3.150.filt.*;BI.Brain_Hippocampus_Middle.H3K36me3.149.filt.* | BI.Brain_Hippocampus_Middle.H3K27ac.149.filt.*;BI.Brain_Hippocampus_Middle.H3K27ac.150.filt.* | E071 | E071 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.009875 | 1.022689 | 1.020796 | 1.253816 | 1.054481 | 1.025009 | 1.168814 | 0.2997282 | 0.2863363 | 0.570331 | 1.229714 | 1.09252 | 0.5991612 | 1.462445 | |||||||||||||||||||||||||||||||||||||||||
68 | E074 | 65 | Brain | #C5912B | BRN.SUB.NIG | 1 | 0 | 1 | 0 | 0 | Brain Substantia Nigra | Brain_Substantia_Nigra | BRAIN | PrimaryTissue | BI | 75Y, 81Y | Mixed | SOLID | Unknown | C | 112;149 | Class 5 | BI.Brain_Substantia_Nigra.Input.112.filt.*;BI.Brain_Substantia_Nigra.Input.149.filt.* | BI.Brain_Substantia_Nigra.H3K9me3.149.filt.*;BI.Brain_Substantia_Nigra.H3K9me3.112.filt.* | BI.Brain_Substantia_Nigra.H3K27me3.112.filt.*;BI.Brain_Substantia_Nigra.H3K27me3.149.filt.* | BI.Brain_Substantia_Nigra.H3K4me3.112.filt.*;BI.Brain_Substantia_Nigra.H3K4me3.149.filt.* | BI.Brain_Substantia_Nigra.H3K4me1.149.filt.*;BI.Brain_Substantia_Nigra.H3K4me1.112.filt.* | BI.Brain_Substantia_Nigra.H3K36me3.149.filt.*;BI.Brain_Substantia_Nigra.H3K36me3.112.filt.* | BI.Brain_Substantia_Nigra.H3K27ac.149.filt.*;BI.Brain_Substantia_Nigra.H3K27ac.149.DNA_Lib_1847.filt.* | BI.Brain_Substantia_Nigra.H3K9ac.112.filt.* | E074 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.008306 | 1.018948 | 1.014435 | 1.099602 | 1.041693 | 1.022404 | 1.108212 | 1.08655 | 0.2830747 | 0.314666 | 0.5269897 | 0.9953617 | 0.9684357 | 0.5937043 | 1.352703 | 1.478359 | ||||||||||||||||||||||||||||||||||||||
69 | E068 | 66 | Brain | #C5912B | BRN.ANT.CAUD | 1 | 0 | 1 | 1 | 1 | Brain Anterior Caudate | Brain_Anterior_Caudate | BRAIN | PrimaryTissue | BI | 75Y, 81Y | Mixed | SOLID | Unknown | C | 112;149 | Class 5 | BI.Brain_Anterior_Caudate.Input.149.filt.*;BI.Brain_Anterior_Caudate.Input.112.filt.* | BI.Brain_Anterior_Caudate.H3K9me3.112.filt.*;BI.Brain_Anterior_Caudate.H3K9me3.149.filt.* | BI.Brain_Anterior_Caudate.H3K27me3.149.filt.*;BI.Brain_Anterior_Caudate.H3K27me3.112.filt.* | BI.Brain_Anterior_Caudate.H3K4me3.149.filt.*;BI.Brain_Anterior_Caudate.H3K4me3.112.filt.* | BI.Brain_Anterior_Caudate.H3K4me1.112.filt.*;BI.Brain_Anterior_Caudate.H3K4me1.149.filt.* | BI.Brain_Anterior_Caudate.H3K36me3.112.filt.*;BI.Brain_Anterior_Caudate.H3K36me3.149.filt.* | BI.Brain_Anterior_Caudate.H3K27ac.149.filt.*;BI.Brain_Anterior_Caudate.H3K27ac.112.filt.* | BI.Brain_Anterior_Caudate.H3K9ac.112.filt.* | E068 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 28970422 | 1.008648 | 1.028603 | 1.014446 | 1.240288 | 1.041695 | 1.023585 | 1.09184 | 1.095767 | 0.3026635 | 0.362468 | 0.5141281 | 1.18746 | 1.003923 | 0.6680478 | 1.329843 | 1.783321 | ||||||||||||||||||||||||||||||||||||||
70 | E069 | 67 | Brain | #C5912B | BRN.CING.GYR | 1 | 0 | 1 | 0 | 0 | Brain Cingulate Gyrus | Brain_Cingulate_Gyrus | BRAIN | PrimaryTissue | BI | 75Y, 81Y | Mixed | SOLID | Unknown | C | 112;149 | Class 5 | BI.Brain_Cingulate_Gyrus.Input.112.filt.*;BI.Brain_Cingulate_Gyrus.Input.149.filt.* | BI.Brain_Cingulate_Gyrus.H3K9me3.149.filt.*;BI.Brain_Cingulate_Gyrus.H3K9me3.112.filt.* | BI.Brain_Cingulate_Gyrus.H3K27me3.149.filt.* | BI.Brain_Cingulate_Gyrus.H3K4me3.149.filt.*;BI.Brain_Cingulate_Gyrus.H3K4me3.112.filt.* | BI.Brain_Cingulate_Gyrus.H3K4me1.149.filt.*;BI.Brain_Cingulate_Gyrus.H3K4me1.112.filt.* | BI.Brain_Cingulate_Gyrus.H3K36me3.149.filt.*;BI.Brain_Cingulate_Gyrus.H3K36me3.112.filt.* | BI.Brain_Cingulate_Gyrus.H3K27ac.149.filt.*;BI.Brain_Cingulate_Gyrus.H3K27ac.112.filt.* | BI.Brain_Cingulate_Gyrus.H3K9ac.112.filt.* | E069 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.008781 | 1.019605 | 1.019038 | 1.179755 | 1.041577 | 1.020676 | 1.061417 | 1.09553 | 0.3462423 | 0.3204169 | 0.6299703 | 1.176489 | 1.021215 | 0.6485255 | 1.216217 | 1.454619 | ||||||||||||||||||||||||||||||||||||||
71 | E072 | 68 | Brain | #C5912B | BRN.INF.TMP | 1 | 0 | 1 | 1 | 0 | Brain Inferior Temporal Lobe | Brain_Inferior_Temporal_Lobe | BRAIN | PrimaryTissue | BI | 75Y, 81Y | Mixed | SOLID | Unknown | C | 112;149 | Class 5 | BI.Brain_Inferior_Temporal_Lobe.Input.149.filt.*;BI.Brain_Inferior_Temporal_Lobe.Input.112.filt.* | BI.Brain_Inferior_Temporal_Lobe.H3K9me3.149.filt.*;BI.Brain_Inferior_Temporal_Lobe.H3K9me3.112.filt.* | BI.Brain_Inferior_Temporal_Lobe.H3K27me3.149.filt.*;BI.Brain_Inferior_Temporal_Lobe.H3K27me3.112.filt.* | BI.Brain_Inferior_Temporal_Lobe.H3K4me3.149.filt.*;BI.Brain_Inferior_Temporal_Lobe.H3K4me3.112.filt.* | BI.Brain_Inferior_Temporal_Lobe.H3K4me1.112.filt.* | BI.Brain_Inferior_Temporal_Lobe.H3K36me3.149.filt.*;BI.Brain_Inferior_Temporal_Lobe.H3K36me3.112.filt.* | BI.Brain_Inferior_Temporal_Lobe.H3K27ac.149.filt.*;BI.Brain_Inferior_Temporal_Lobe.H3K27ac.112.filt.* | BI.Brain_Inferior_Temporal_Lobe.H3K9ac.112.filt.* | E072 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 27859375 | 1.009338 | 1.022747 | 1.017627 | 1.204256 | 1.052195 | 1.024657 | 1.065624 | 1.108807 | 0.3408318 | 0.3073899 | 0.4792563 | 1.159949 | 1.130982 | 0.6442585 | 1.175229 | 1.510438 | ||||||||||||||||||||||||||||||||||||||
72 | E067 | 69 | Brain | #C5912B | BRN.ANG.GYR | 1 | 0 | 1 | 1 | 0 | Brain Angular Gyrus | Brain_Angular_Gyrus | BRAIN | PrimaryTissue | BI | 75Y, 81Y | Mixed | SOLID | Unknown | C | 112;149 | Class 5 | BI.Brain_Angular_Gyrus.Input.149.filt.* | BI.Brain_Angular_Gyrus.H3K9me3.149.filt.*;BI.Brain_Angular_Gyrus.H3K9me3.112.filt.* | BI.Brain_Angular_Gyrus.H3K27me3.149.filt.* | BI.Brain_Angular_Gyrus.H3K4me3.149.filt.*;BI.Brain_Angular_Gyrus.H3K4me3.112.filt.* | BI.Brain_Angular_Gyrus.H3K4me1.112.filt.*;BI.Brain_Angular_Gyrus.H3K4me1.149.filt.* | BI.Brain_Angular_Gyrus.H3K36me3.112.filt.*;BI.Brain_Angular_Gyrus.H3K36me3.149.filt.* | BI.Brain_Angular_Gyrus.H3K27ac.149.filt.*;BI.Brain_Angular_Gyrus.H3K27ac.112.filt.* | BI.Brain_Angular_Gyrus.H3K9ac.112.filt.* | E067 | 30000000 | 30000000 | 23795099 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.011377 | 1.018714 | 1.020748 | 1.140909 | 1.036023 | 1.022922 | 1.063696 | 1.071854 | 0.3986499 | 0.3380668 | 0.5263224 | 1.142508 | 0.9856515 | 0.6755575 | 1.2395 | 1.430562 | ||||||||||||||||||||||||||||||||||||||
73 | E073 | 70 | Brain | #C5912B | BRN.DL.PRFRNTL.CRTX | 1 | 0 | 1 | 1 | 0 | Brain_Dorsolateral_Prefrontal_Cortex | Brain_Mid_Frontal_Lobe | BRAIN | PrimaryTissue | BI | 75Y, 81Y | Mixed | SOLID | Unknown | C | 112;149 | Class 5 | BI.Brain_Mid_Frontal_Lobe.Input.149.filt.*;BI.Brain_Dorsolateral_Prefrontal_Cortex.Input.112.filt.* | BI.Brain_Mid_Frontal_Lobe.H3K9me3.112.filt.*;BI.Brain_Dorsolateral_Prefrontal_Cortex.H3K9me3.149.filt.* | BI.Brain_Mid_Frontal_Lobe.H3K27me3.149.filt.* | BI.Brain_Mid_Frontal_Lobe.H3K4me3.112.filt.*;BI.Brain_Dorsolateral_Prefrontal_Cortex.H3K4me3.149.filt.* | BI.Brain_Mid_Frontal_Lobe.H3K4me1.149.filt.*;BI.Brain_Dorsolateral_Prefrontal_Cortex.H3K4me1.112.filt.* | BI.Brain_Mid_Frontal_Lobe.H3K36me3.149.filt.*;BI.Brain_Dorsolateral_Prefrontal_Cortex.H3K36me3.112.filt.* | BI.Brain_Dorsolateral_Prefrontal_Cortex.H3K27ac.112.filt.*;BI.Brain_Dorsolateral_Prefrontal_Cortex.H3K27ac.149.filt.* | BI.Brain_Dorsolateral_Prefrontal_Cortex.H3K9ac.112.filt.* | E073 | 30000000 | 30000000 | 25005527 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.008258 | 1.02079 | 1.018793 | 1.151389 | 1.029158 | 1.020666 | 1.052271 | 1.068147 | 0.3321059 | 0.336067 | 0.502085 | 1.115307 | 0.91117 | 0.6118538 | 1.14011 | 1.291286 | ||||||||||||||||||||||||||||||||||||||
74 | E070 | 71 | Brain | #C5912B | BRN.GRM.MTRX | -1 | 0 | 0 | 0 | 0 | Brain Germinal Matrix | Brain_Germinal_Matrix | BRAIN | PrimaryTissue | UCSF-UBC | 20GW | Male | SOLID | Unknown | SD | HuFGM02 | Class 2 | UCSF-UBC.Brain_Germinal_Matrix.Input.HuFGM02.filt.* | UCSF-UBC.Brain_Germinal_Matrix.H3K9me3.HuFGM02.filt.* | UCSF-UBC.Brain_Germinal_Matrix.H3K27me3.HuFGM02.filt.* | UCSF-UBC.Brain_Germinal_Matrix.H3K4me3.HuFGM02.filt.* | UCSF-UBC.Brain_Germinal_Matrix.H3K4me1.HuFGM02.filt.* | UCSF-UBC.Brain_Germinal_Matrix.H3K36me3.HuFGM02.filt.* | E070 | E070 | 13500539 | 11098064 | 15831098 | 20093552 | 23639036 | 20583742 | 1.031491 | 1.077871 | 1.096528 | 1.997389 | 1.037452 | 1.01966 | 2.70679 | 0.7187945 | 2.807775 | 1.175372 | 1.05178 | 0.7058803 | |||||||||||||||||||||||||||||||||||||||||||||
75 | E082 | 72 | Brain | #C5912B | BRN.FET.F | 1 | -1 | 0 | 0 | 0 | Fetal Brain Female | Fetal_Brain_Female | BRAIN | PrimaryTissue | UCSF-UBC | 17GW. 17GW | Female | SOLID | Unknown | C | HuFNSC01;HuFNSC02 | Class 4 | UCSF-UBC.Fetal_Brain.Input.HuFNSC02.filt.*;UCSF-UBC.Fetal_Brain.Input.HuFNSC01.filt.* | UCSF-UBC.Fetal_Brain.H3K9me3.HuFNSC02.filt.*;UCSF-UBC.Fetal_Brain.H3K9me3.HuFNSC01.filt.* | UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC02.filt.*;UCSF-UBC.Fetal_Brain.H3K27me3.HuFNSC01.filt.* | UCSF-UBC.Fetal_Brain.H3K4me3.HuFNSC01.filt.*;UCSF-UBC.Fetal_Brain.H3K4me3.HuFNSC02.filt.* | UCSF-UBC.Fetal_Brain.H3K4me1.HuFNSC02.filt.*;UCSF-UBC.Fetal_Brain.H3K4me1.HuFNSC01.filt.* | UCSF-UBC.Fetal_Brain.H3K36me3.HuFNSC01.filt.*;UCSF-UBC.Fetal_Brain.H3K36me3.HuFNSC02.filt.* | UW.Fetal_Brain.ChromatinAccessibility.H-22911.DS14464.filt.* | E082 | E082 | 28368823 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 26680226 | 1.018166 | 1.028583 | 1.015827 | 1.689535 | 1.025306 | 1.018568 | 3.206759 | 1.542821 | 0.5097279 | 0.8986659 | 1.140993 | 1.099924 | 0.8121176 | 1.014115 | |||||||||||||||||||||||||||||||||||||||||
76 | E081 | 73 | Brain | #C5912B | BRN.FET.M | 0 | -1 | 0 | 0 | 0 | Fetal Brain Male | Fetal_Brain_Male | BRAIN | PrimaryTissue | BI | 17GW, 17GW | Male/Unknown | SOLID | Unknown | C | H-22510;UW_H22676 | Class 3 | BI.Fetal_Brain.Input.UW_H22676.filt.* | BI.Fetal_Brain.H3K9me3.UW_H-22510.filt.*;BI.Fetal_Brain.H3K9me3.UW_H22676.filt.* | BI.Fetal_Brain.H3K27me3.UW_H-22510.filt.*;BI.Fetal_Brain.H3K27me3.UW_H22676.filt.* | BI.Fetal_Brain.H3K4me3.UW_H-22510.filt.* | BI.Fetal_Brain.H3K4me1.UW_H22676.filt.* | BI.Fetal_Brain.H3K36me3.UW_H-22510.filt.* | UW.Fetal_Brain.ChromatinAccessibility.H-22510.DS11872.filt.*;UW.Fetal_Brain.ChromatinAccessibility.H-22510.DS11877.filt.* | E081 | E081 | 15986718 | 30000000 | 30000000 | 27040862 | 16684621 | 27976521 | 50000000 | 1.013594 | 1.024304 | 1.026613 | 1.054235 | 1.137925 | 1.025895 | 3.255464 | 0.2857372 | 0.2582993 | 0.8200692 | 0.7660045 | 1.713123 | 0.78076 | 1.012404 | |||||||||||||||||||||||||||||||||||||||||
77 | E063 | 74 | Adipose | #AF5B39 | FAT.ADIP.NUC | 1 | 0 | 1 | 1 | 1 | Adipose Nuclei | Adipose_Nuclei | FAT | PrimaryTissue | BI | 49Y, 59Y, 41Y, 25Y, 81Y | Female | SOLID | Unknown | C | 7;92;93;94;95 | Class 5 | BI.Adipose_Nuclei.Input.94.filt.*;BI.Adipose_Nuclei.Input.92.filt.*;BI.Adipose_Nuclei.Input.93.filt.*;BI.Adipose_Nuclei.Input.7.filt.*;BI.Adipose_Nuclei.Input.95.filt.* | BI.Adipose_Nuclei.H3K9me3.95.filt.*;BI.Adipose_Nuclei.H3K9me3.93.filt.*;BI.Adipose_Nuclei.H3K9me3.92.filt.*;BI.Adipose_Nuclei.H3K9me3.94.filt.*;BI.Adipose_Nuclei.H3K9me3.7.filt.* | BI.Adipose_Nuclei.H3K27me3.92.filt.*;BI.Adipose_Nuclei.H3K27me3.7.filt.*;BI.Adipose_Nuclei.H3K27me3.95.filt.*;BI.Adipose_Nuclei.H3K27me3.94.filt.*;BI.Adipose_Nuclei.H3K27me3.93.filt.* | BI.Adipose_Nuclei.H3K4me3.92.filt.*;BI.Adipose_Nuclei.H3K4me3.95.filt.*;BI.Adipose_Nuclei.H3K4me3.7.filt.*;BI.Adipose_Nuclei.H3K4me3.93.filt.*;BI.Adipose_Nuclei.H3K4me3.94.filt.* | BI.Adipose_Nuclei.H3K4me1.93.filt.*;BI.Adipose_Nuclei.H3K4me1.95.filt.*;BI.Adipose_Nuclei.H3K4me1.7.filt.*;BI.Adipose_Nuclei.H3K4me1.92.filt.*;BI.Adipose_Nuclei.H3K4me1.94.filt.* | BI.Adipose_Nuclei.H3K36me3.7.filt.*;BI.Adipose_Nuclei.H3K36me3.93.filt.*;BI.Adipose_Nuclei.H3K36me3.94.filt.*;BI.Adipose_Nuclei.H3K36me3.95.filt.*;BI.Adipose_Nuclei.H3K36me3.92.filt.* | BI.Adipose_Nuclei.H3K27ac.7.filt.* | BI.Adipose_Nuclei.H3K9ac.92.filt.*;BI.Adipose_Nuclei.H3K9ac.93.filt.*;BI.Adipose_Nuclei.H3K9ac.94.filt.*;BI.Adipose_Nuclei.H3K9ac.7.filt.*;BI.Adipose_Nuclei.H3K9ac.95.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 16568068 | 30000000 | 1.010264 | 1.035577 | 1.019112 | 1.480939 | 1.096724 | 1.047644 | 1.175257 | 1.060713 | 0.3845206 | 0.3787553 | 0.7004833 | 1.184299 | 1.103413 | 0.8495083 | 1.471016 | 1.121351 | |||||||||||||||||||||||||||||||||||||||
78 | E100 | 75 | Muscle | #C2655D | MUS.PSOAS | -1 | 1 | 0 | 0 | 0 | Psoas Muscle | Psoas_Muscle | MUSCLE | PrimaryTissue | UCSD | 3Y, 34Y | Male | SOLID | Caucasian/African American, Caucasian | C | STL001;STL003 | Class 2 | UCSD.Psoas_Muscle.Input.STL001.filt.*;UCSD.Psoas_Muscle.Input.STL003.filt.* | UCSD.Psoas_Muscle.H3K9me3.STL001.filt.* | UCSD.Psoas_Muscle.H3K27me3.STL003.filt.* | UCSD.Psoas_Muscle.H3K4me3.STL003.filt.*;UCSD.Psoas_Muscle.H3K4me3.STL001.filt.* | UCSD.Psoas_Muscle.H3K4me1.STL003.filt.*;UCSD.Psoas_Muscle.H3K4me1.STL001.filt.* | UCSD.Psoas_Muscle.H3K36me3.STL001.filt.* | UCSD.Psoas_Muscle.H3K27ac.STL003.filt.*;UCSD.Psoas_Muscle.H3K27ac.STL001.filt.* | UW.Psoas_Muscle.ChromatinAccessibility.STL001.DNase.DS20325.filt.* | E100 | E100 | 30000000 | 24435553 | 8837740 | 30000000 | 26803294 | 18935078 | 15780458 | 40950995 | 1.055293 | 1.030231 | 1.123162 | 1.730105 | 1.07168 | 1.040847 | 1.639244 | 1.745764 | 1.217237 | 0.7086119 | 0.9226674 | 1.207852 | 1.255488 | 1.189202 | 1.380486 | 1.013902 | |||||||||||||||||||||||||||||||||||||
79 | E108 | 76 | Muscle | #C2655D | MUS.SKLT.F | 1 | 0 | 1 | 0 | 0 | Skeletal Muscle Female | Skeletal_Muscle_Female | MUSCLE | PrimaryTissue | BI | 72Y | Female | SOLID | Caucasian | SD | 62 | Class 4 | BI.Skeletal_Muscle.Input.62.filt.* | BI.Skeletal_Muscle.H3K9me3.62.filt.* | BI.Skeletal_Muscle.H3K27me3.62.filt.* | BI.Skeletal_Muscle.H3K4me3.62.filt.* | BI.Skeletal_Muscle.H3K4me1.62.filt.* | BI.Skeletal_Muscle.H3K36me3.62.filt.* | BI.Skeletal_Muscle.H3K27ac.62.filt.* | BI.Skeletal_Muscle.H3K9ac.62.filt.* | E108 | 30000000 | 27308448 | 29558349 | 27458610 | 29822180 | 29821919 | 18923998 | 18468249 | 1.009016 | 1.019056 | 1.024981 | 1.317353 | 1.108288 | 1.030952 | 1.388455 | 1.259895 | 0.3870396 | 0.3498212 | 0.7996356 | 1.17297 | 1.423246 | 0.7467262 | 1.629858 | 1.644492 | ||||||||||||||||||||||||||||||||||||||
80 | E107 | 77 | Muscle | #C2655D | MUS.SKLT.M | 1 | 0 | 1 | 0 | 0 | Skeletal Muscle Male | Skeletal_Muscle_Male | MUSCLE | PrimaryTissue | BI | 54Y | Male | SOLID | Caucasian | SD | 63 | Class 4 | BI.Skeletal_Muscle.Input.63.filt.* | BI.Skeletal_Muscle.H3K9me3.63.filt.* | BI.Skeletal_Muscle.H3K27me3.63.filt.* | BI.Skeletal_Muscle.H3K4me3.63.filt.* | BI.Skeletal_Muscle.H3K4me1.63.filt.* | BI.Skeletal_Muscle.H3K36me3.63.filt.* | BI.Skeletal_Muscle.H3K9ac.63.filt.* | E107 | 26846263 | 26170023 | 28560240 | 27898894 | 26941724 | 28968736 | 24165192 | 1.019718 | 1.01983 | 1.029497 | 1.279372 | 1.117597 | 1.028778 | 1.35991 | 0.4857033 | 0.3301333 | 0.8749924 | 1.160108 | 1.495565 | 0.6983971 | 1.617319 | ||||||||||||||||||||||||||||||||||||||||||
81 | E089 | 78 | Muscle | #C2655D | MUS.TRNK.FET | -1 | 1 | 0 | 0 | 0 | Fetal Muscle Trunk | Fetal_Muscle_Trunk | MUSCLE | PrimaryTissue | UW | 16GW | Female | SOLID | Unknown | SD | H-24851 | Class 5 | UW.Fetal_Muscle_Trunk.Input.H-24854.Histone.DS23031.filt.* | UW.Fetal_Muscle_Trunk.H3K9me3.H-24851.Histone.DS23309.filt.* | UW.Fetal_Muscle_Trunk.H3K27me3.H-24851.Histone.DS23036.filt.* | UW.Fetal_Muscle_Trunk.H3K4me3.H-24851.Histone.DS23302.filt.* | UW.Fetal_Muscle_Trunk.H3K4me1.H-24851.Histone.DS23308.filt.* | UW.Fetal_Muscle_Trunk.H3K36me3.H-24851.Histone.DS23037.filt.* | UW.Fetal_Muscle_Trunk.H3K27ac.H-24851.Histone.DS23303.filt.* | UW.Fetal_Muscle_Trunk.ChromatinAccessibility.H-24409.DS20242.filt.*;UW.Fetal_Muscle_Trunk.ChromatinAccessibility.H-23941.DS17827.filt.*;UW.Fetal_Muscle_Trunk.ChromatinAccessibility.H-24507.DS20544.filt.* | 18197787 | 19336164 | 19159641 | 30000000 | 17656092 | 30000000 | 17469992 | 50000000 | 1.009215 | 1.027113 | 1.246836 | 1.861682 | 1.21373 | 1.040924 | 1.269069 | 1.800939 | 0.257196 | 0.2296299 | 1.720317 | 1.292973 | 1.632284 | 0.8644312 | 1.325658 | 1.022345 | |||||||||||||||||||||||||||||||||||||||
82 | E090 | 79 | Muscle | #C2655D | MUS.LEG.FET | 0 | 1 | 1 | 1 | 1 | Fetal Muscle Leg | Fetal_Muscle_Leg | MUSCLE_LEG | PrimaryTissue | UW | 15GW | Female | SOLID | Unknown | SD | H-24644 | Class 5 | UW.Fetal_Muscle_Leg.Input.H-24644.Histone.DS21509.filt.* | UW.Fetal_Muscle_Leg.H3K9me3.H-24644.Histone.DS22903.filt.* | UW.Fetal_Muscle_Leg.H3K27me3.H-24644.Histone.DS22559.filt.* | UW.Fetal_Muscle_Leg.H3K4me3.H-24644.Histone.DS21536.filt.* | UW.Fetal_Muscle_Leg.H3K4me1.H-24644.Histone.DS22558.filt.* | UW.Fetal_Muscle_Leg.H3K36me3.H-24644.Histone.DS22560.filt.* | UW.Fetal_Muscle_Leg.H3K27ac.H-24644.Histone.DS21782.filt.* | UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-23808.DS17429.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24143.DS18844.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24089.DS18456.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24409.DS20239.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24078.DS18386.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24218.DS19115.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24111.DS18471.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24259.DS19291.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24297.DS19643.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24198.DS19158.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24279.DS19436.filt.*;UW.Fetal_Muscle_Leg.ChromatinAccessibility.H-24244.DS19272.filt.* | 23415690 | 25759731 | 22108954 | 29834349 | 30000000 | 30000000 | 26085199 | 50000000 | 1.006703 | 1.034579 | 1.110335 | 1.872176 | 1.130584 | 1.049183 | 1.416086 | 1.633174 | 0.2777632 | 0.4087277 | 1.493098 | 1.287195 | 1.330912 | 1.063249 | 1.344083 | 1.026829 | |||||||||||||||||||||||||||||||||||||||
83 | E083 | 80 | Heart | #D56F80 | HRT.FET | -1 | -1 | 0 | 0 | 0 | Fetal Heart | Fetal_Heart | HEART | PrimaryTissue | BI | 14GW, 15GW, 13GW | Mixed | SOLID | Unknown | C | H-22727;H-23524;UW_H23914 | Class 3 | BI.Fetal_Heart.Input.UW_H-22727.filt.*;BI.Fetal_Heart.Input.H-23468.filt.* | BI.Fetal_Heart.H3K9me3.UW_H-22727.filt.* | BI.Fetal_Heart.H3K27me3.UW_H-22727.filt.* | BI.Fetal_Heart.H3K4me3.UW_H23914.filt.* | BI.Fetal_Heart.H3K4me1.H-23524.filt.*;BI.Fetal_Heart.H3K4me1.UW_H23914.filt.* | BI.Fetal_Heart.H3K36me3.UW_H-22727.filt.* | BI.Fetal_Heart.H3K9ac.H-23524.filt.* | UW.Fetal_Heart.ChromatinAccessibility.H-23468.DS15839.filt.*;UW.Fetal_Heart.ChromatinAccessibility.H-22727.DS12810.filt.*;UW.Fetal_Heart.ChromatinAccessibility.H-23524.DS16146.filt.* | E083 | 21203977 | 17982142 | 21485738 | 13971404 | 30000000 | 18207403 | 15704109 | 50000000 | 1.043612 | 1.026552 | 1.034182 | 1.057732 | 1.084975 | 1.028479 | 1.262895 | 1.498979 | 0.659065 | 0.308247 | 0.815127 | 0.4979881 | 1.194977 | 0.487379 | 1.643361 | 1.018289 | ||||||||||||||||||||||||||||||||||||||
84 | Likely antibody issue with H3K36me3. Use this sample with extreme caution especially any chromatin states associated with H3K36me3 | E104 | 81 | Heart | #D56F80 | HRT.ATR.R | -1 | 1 | 0 | 0 | 0 | Right Atrium | Right_Atrium | HEART | PrimaryTissue | UCSD | 34Y | Male | SOLID | Caucasian | SD | STL003 | Class 2 | UCSD.Right_Atrium.Input.STL003.filt.* | UCSD.Right_Atrium.H3K9me3.STL003.filt.* | UCSD.Right_Atrium.H3K27me3.STL003.filt.* | UCSD.Right_Atrium.H3K4me3.STL003.filt.* | UCSD.Right_Atrium.H3K4me1.STL003.filt.* | UCSD.Right_Atrium.H3K36me3.STL003.filt.* | UCSD.Right_Atrium.H3K27ac.STL003.filt.* | E104 | E104 | 21667490 | 30000000 | 26426254 | 24225024 | 17828160 | 8084109 | 24618650 | 1.043458 | 1.037845 | 1.018755 | 1.608839 | 1.116844 | 1.128591 | 1.356887 | 0.7962318 | 0.9176149 | 0.7783211 | 1.181599 | 1.418475 | 0.7385536 | 1.489159 | ||||||||||||||||||||||||||||||||||||||||
85 | E095 | 82 | Heart | #D56F80 | HRT.VENT.L | 1 | 1 | 1 | 0 | 0 | Left Ventricle | Left_Ventricle | HEART | PrimaryTissue | UCSD | 3Y, 34Y | Male | SOLID | Caucasian/African American, Caucasian | C | STL001;STL003 | Class 2 | UCSD.Left_Ventricle.Input.STL003.filt.*;UCSD.Left_Ventricle.Input.STL001.filt.* | UCSD.Left_Ventricle.H3K9me3.STL001.filt.*;UCSD.Left_Ventricle.H3K9me3.STL003.filt.* | UCSD.Left_Ventricle.H3K27me3.STL003.filt.*;UCSD.Left_Ventricle.H3K27me3.STL001.filt.* | UCSD.Left_Ventricle.H3K4me3.STL003.filt.*;UCSD.Left_Ventricle.H3K4me3.STL001.filt.* | UCSD.Left_Ventricle.H3K4me1.STL003.filt.*;UCSD.Left_Ventricle.H3K4me1.STL001.filt.* | UCSD.Left_Ventricle.H3K36me3.STL003.filt.*;UCSD.Left_Ventricle.H3K36me3.STL001.filt.* | UCSD.Left_Ventricle.H3K27ac.STL003.filt.*;UCSD.Left_Ventricle.H3K27ac.STL001.filt.* | E095 | E095 | 30000000 | 18215079 | 30000000 | 29961373 | 30000000 | 30000000 | 30000000 | 1.038965 | 1.087902 | 1.050333 | 2.205984 | 1.100094 | 1.061405 | 1.559641 | 0.9007118 | 0.3942377 | 0.9240148 | 1.319206 | 1.496816 | 1.065372 | 1.501934 | |||||||||||||||||||||||||||||||||||||||||
86 | E105 | 83 | Heart | #D56F80 | HRT.VNT.R | -1 | 1 | 0 | 0 | 0 | Right Ventricle | Right_Ventricle | HEART | PrimaryTissue | UCSD | 3Y, 34Y | Male | SOLID | Caucasian/African American, Caucasian | C | STL001;STL003 | Class 2 | UCSD.Right_Ventricle.Input.STL003.filt.*;UCSD.Right_Ventricle.Input.STL001.filt.* | UCSD.Right_Ventricle.H3K9me3.STL001.filt.* | UCSD.Right_Ventricle.H3K27me3.STL001.filt.* | UCSD.Right_Ventricle.H3K4me3.STL001.filt.* | UCSD.Right_Ventricle.H3K4me1.STL003.filt.*;UCSD.Right_Ventricle.H3K4me1.STL001.filt.* | UCSD.Right_Ventricle.H3K36me3.STL003.filt.*;UCSD.Right_Ventricle.H3K36me3.STL001.filt.* | UCSD.Right_Ventricle.H3K27ac.STL001.filt.* | E105 | E105 | 30000000 | 30000000 | 23238486 | 9425366 | 30000000 | 22390897 | 10326840 | 1.0409 | 1.031771 | 1.01919 | 2.084492 | 1.051174 | 1.050918 | 1.811142 | 0.8537655 | 0.9411831 | 0.4773578 | 1.249359 | 0.9781704 | 0.7942311 | 1.295517 | |||||||||||||||||||||||||||||||||||||||||
87 | E065 | 84 | Heart | #D56F80 | VAS.AOR | 1 | 1 | 1 | 0 | 0 | Aorta | Aorta | VASCULAR | PrimaryTissue | UCSD | 34Y | Male | SOLID | Caucasian | SD | STL003 | Class 2 | UCSD.Aorta.Input.STL003.filt.* | UCSD.Aorta.H3K9me3.STL003.filt.* | UCSD.Aorta.H3K27me3.STL003.filt.* | UCSD.Aorta.H3K4me3.STL003.filt.* | UCSD.Aorta.H3K4me1.STL003.filt.* | UCSD.Aorta.H3K36me3.STL003.filt.* | UCSD.Aorta.H3K27ac.STL003.filt.* | E065 | E065 | 16628788 | 27455320 | 15468868 | 21785763 | 16240982 | 28146127 | 21179493 | 1.08362 | 1.121816 | 1.078225 | 1.155753 | 1.075426 | 1.073575 | 1.345014 | 1.094321 | 1.234235 | 1.215644 | 1.123116 | 1.155819 | 1.301712 | 1.566411 | |||||||||||||||||||||||||||||||||||||||||
88 | E078 | 85 | Sm. Muscle | #F182BC | GI.DUO.SM.MUS | 1 | 0 | 1 | 1 | 0 | Duodenum Smooth Muscle | Duodenum_Smooth_Muscle | GI_DUODENUM | PrimaryTissue | BI | 59Y, 73Y | Male | SOLID | Caucasian | C | 160;174_REMC_28 | Class 5 | BI.Duodenum_Smooth_Muscle.Input.160.filt.*;BI.Duodenum_Smooth_Muscle.Input.Donor_174_REMC_28.filt.* | BI.Duodenum_Smooth_Muscle.H3K9me3.Donor_174_REMC_28.filt.*;BI.Duodenum_Smooth_Muscle.H3K9me3.160.filt.* | BI.Duodenum_Smooth_Muscle.H3K27me3.Donor_174_REMC_28.filt.*;BI.Duodenum_Smooth_Muscle.H3K27me3.160.filt.* | BI.Duodenum_Smooth_Muscle.H3K4me3.160.filt.*;BI.Duodenum_Smooth_Muscle.H3K4me3.Donor_174_REMC_28.filt.* | BI.Duodenum_Smooth_Muscle.H3K4me1.Donor_174_REMC_28.filt.*;BI.Duodenum_Smooth_Muscle.H3K4me1.160.filt.* | BI.Duodenum_Smooth_Muscle.H3K36me3.Donor_174_REMC_28.filt.*;BI.Duodenum_Smooth_Muscle.H3K36me3.160.filt.* | BI.Duodenum_Smooth_Muscle.H3K27ac.160.filt.* | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 1.010112 | 1.025761 | 1.018638 | 1.191666 | 1.033616 | 1.027327 | 1.067478 | 0.4791484 | 0.2912012 | 0.6289199 | 1.083085 | 0.9088857 | 0.7504953 | 1.206684 | |||||||||||||||||||||||||||||||||||||||||||
89 | E076 | 86 | Sm. Muscle | #F182BC | GI.CLN.SM.MUS | 1 | -1 | 0 | 0 | 0 | Colon Smooth Muscle | Colon_Smooth_Muscle | GI_COLON | PrimaryTissue | BI | 56Y, 77Y | Female | SOLID | Caucasian | C | 156;83_REMC_18 | Class 5 | BI.Colon_Smooth_Muscle.Input.156.filt.*;BI.Colon_Smooth_Muscle.Input.Donor_83_REMC_18.filt.* | BI.Colon_Smooth_Muscle.H3K9me3.Donor_83_REMC_18.filt.*;BI.Colon_Smooth_Muscle.H3K9me3.156.filt.* | BI.Colon_Smooth_Muscle.H3K27me3.156.filt.*;BI.Colon_Smooth_Muscle.H3K27me3.Donor_83_REMC_18.filt.* | BI.Colon_Smooth_Muscle.H3K4me3.Donor_83_REMC_18.filt.*;BI.Colon_Smooth_Muscle.H3K4me3.156.filt.* | BI.Colon_Smooth_Muscle.H3K4me1.Donor_83_REMC_18.filt.* | BI.Colon_Smooth_Muscle.H3K36me3.156.DNA_Lib_1851.filt.*;BI.Colon_Smooth_Muscle.H3K36me3.156.filt.*;BI.Colon_Smooth_Muscle.H3K36me3.Donor_83_REMC_18.filt.* | BI.Colon_Smooth_Muscle.H3K27ac.156.filt.* | BI.Colon_Smooth_Muscle.H3K9ac.Donor_83_REMC_18.filt.* | E076 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 30000000 | 13712553 | 29463125 | 1.0083 | 1.016964 | 1.009734 | 1.085572 | 1.04331 | 1.016941 | 1.126646 | 1.025953 | 0.4364708 | 0.2845549 | 0.4104631 | 0.9318164 | 1.038717 | 0.4858892 | 1.373751 | 0.7857681 | ||||||||||||||||||||||||||||||||||||||
90 | E103 | 87 | Sm. Muscle | #F182BC | GI.RECT.SM.MUS | 0 | 0 | 1 | 1 | 1 | Rectal Smooth Muscle | Rectal_Smooth_Muscle | GI_RECTUM | PrimaryTissue | BI | 50Y | Female | SOLID | Caucasian | SD | 30 | Class 5 | BI.Rectal_Smooth_Muscle.Input.30.filt.* | BI.Rectal_Smooth_Muscle.H3K9me3.30.filt.* | BI.Rectal_Smooth_Muscle.H3K27me3.30.filt.* | BI.Rectal_Smooth_Muscle.H3K4me3.30.filt.* | BI.Rectal_Smooth_Muscle.H3K4me1.30.filt.* | BI.Rectal_Smooth_Muscle.H3K36me3.30.filt.* | BI.Rectal_Smooth_Muscle.H3K27ac.30.filt.* | BI.Rectal_Smooth_Muscle.H3K9ac.30.filt.* | E103 | 26466701 | 17983778 | 23089621 | 25364063 | 30000000 | 25482942 | 18644022 | 22689804 | 1.010755 | 1.030161 | 1.030184 | 1.331521 | 1.042337 | 1.029342 | 1.317275 | 1.04742 | 0.345395 | 0.3143315 | 0.8392656 | 1.225264 | 1.003148 | 0.7078092 | 1.445667 | 0.9791254 | ||||||||||||||||||||||||||||||||||||||
91 | E111 | 88 | Sm. Muscle | #F182BC | GI.STMC.MUS | 0 | 0 | 1 | 1 | 1 | Stomach Smooth Muscle | Stomach_Smooth_Muscle | GI_STOMACH | PrimaryTissue | BI | 84Y | Female | SOLID | Caucasian | SD | 28 | Class 4 | BI.Stomach_Smooth_Muscle.Input.28.filt.* | BI.Stomach_Smooth_Muscle.H3K9me3.28.filt.* | BI.Stomach_Smooth_Muscle.H3K27me3.28.filt.* | BI.Stomach_Smooth_Muscle.H3K4me3.28.filt.* | BI.Stomach_Smooth_Muscle.H3K4me1.28.filt.* | BI.Stomach_Smooth_Muscle.H3K36me3.28.filt.* | BI.Stomach_Smooth_Muscle.H3K27ac.28.filt.* | BI.Stomach_Smooth_Muscle.H3K9ac.28.filt.* | E111 | 23248973 | 23606699 | 24316981 | 21806748 | 13548731 | 24021908 | 22192107 | 30000000 | 1.033567 | 1.035704 | 1.035186 | 1.61192 | 1.095379 | 1.041412 | 1.119046 | 1.064157 | 0.6448956 | 0.4657432 | 1.008094 | 1.195142 | 1.1927 | 0.9987858 | 1.308527 | 1.208107 | ||||||||||||||||||||||||||||||||||||||
92 | E092 | 89 | Digestive | #C58DAA | GI.STMC.FET | 0 | 1 | 1 | 0 | 0 | Fetal Stomach | Fetal_Stomach | GI_STOMACH | PrimaryTissue | UW | Female | SOLID | C | H-24639;H-24683;H-24754;H-24776 | Class 5 | UW.Fetal_Stomach.Input.H-24639.Histone.DS22596.filt.* | UW.Fetal_Stomach.H3K9me3.H-24754.Histone.DS22928.filt.* | UW.Fetal_Stomach.H3K27me3.H-24776.Histone.DS22599.filt.* | UW.Fetal_Stomach.H3K4me3.H-24639.Histone.DS22598.filt.* | UW.Fetal_Stomach.H3K4me1.H-24776.Histone.DS22597.filt.* | UW.Fetal_Stomach.H3K36me3.H-24639.Histone.DS22600.filt.* | UW.Fetal_Stomach.H3K27ac.H-24683.Histone.DS22929.filt.* | UW.Fetal_Stomach.ChromatinAccessibility.H-24005.DS17963.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-24401.DS20349.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-23769.DS17325.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-23964.DS17878.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-24078.DS18389.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-23758.DS17172.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-23887.DS17659.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-24507.DS20546.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-23914.DS17750.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-24125.DS18821.filt.*;UW.Fetal_Stomach.ChromatinAccessibility.H-23589.DS16530.filt.* | 29322147 | 16402941 | 21309182 | 27873393 | 26642071 | 30000000 | 30000000 | 50000000 | 1.005818 | 1.080185 | 1.23599 | 1.825031 | 1.073592 | 1.102397 | 1.55271 | 1.398653 | 0.28174 | 0.4018559 | 1.477 | 1.289951 | 1.071776 | 1.402554 | 1.424816 | 1.022778 | |||||||||||||||||||||||||||||||||||||||||
93 | E085 | 90 | Digestive | #C58DAA | GI.S.INT.FET | 0 | 1 | 1 | 1 | 1 | Fetal Intestine Small | Fetal_Intestine_Small | GI_INTESTINE | PrimaryTissue | UW | 15GW | Male | SOLID | Unknown | SD | H-24595 | Class 2 | UW.Fetal_Intestine_Small.Input.H-24595.Histone.DS21507.filt.* | UW.Fetal_Intestine_Small.H3K9me3.H-24595.Histone.DS22902.filt.* | UW.Fetal_Intestine_Small.H3K27me3.H-24595.Histone.DS22556.filt.* | UW.Fetal_Intestine_Small.H3K4me3.H-24595.Histone.DS21533.filt.* | UW.Fetal_Intestine_Small.H3K4me1.H-24595.Histone.DS22555.filt.* | UW.Fetal_Intestine_Small.H3K36me3.H-24595.Histone.DS22557.filt.* | UW.Fetal_Intestine_Small.H3K27ac.H-24595.Histone.DS21781.filt.* | UW.Fetal_Intestine_Small.ChromatinAccessibility.H-23769.DS17317.filt.* | E085 | E085 | 30000000 | 23116257 | 21167043 | 26466933 | 28388130 | 30000000 | 29678351 | 25353195 | 1.00881 | 1.085092 | 1.04929 | 1.810856 | 1.081232 | 1.113024 | 1.457271 | 1.355387 | 0.5118544 | 0.8327416 | 1.306776 | 1.32226 | 1.157932 | 1.760451 | 1.283062 | 1.005029 | |||||||||||||||||||||||||||||||||||||
94 | E084 | 91 | Digestive | #C58DAA | GI.L.INT.FET | 0 | 1 | 1 | 0 | 0 | Fetal Intestine Large | Fetal_Intestine_Large | GI_INTESTINE | PrimaryTissue | UW | 15GW | Male | SOLID | Unknown | SD | H-24595 | Class 2 | UW.Fetal_Intestine_Large.Input.H-24595.Histone.DS21506.filt.* | UW.Fetal_Intestine_Large.H3K9me3.H-24595.Histone.DS22901.filt.* | UW.Fetal_Intestine_Large.H3K27me3.H-24595.Histone.DS22553.filt.*;UW.Fetal_Intestine_Large.H3K27me3.H-24595.Histone.DS23306.filt.* | UW.Fetal_Intestine_Large.H3K4me3.H-24595.Histone.DS21530.filt.* | UW.Fetal_Intestine_Large.H3K4me1.H-24595.Histone.DS22552.filt.* | UW.Fetal_Intestine_Large.H3K36me3.H-24595.Histone.DS23307.filt.*;UW.Fetal_Intestine_Large.H3K36me3.H-24595.Histone.DS22554.filt.* | UW.Fetal_Intestine_Large.H3K27ac.H-24595.Histone.DS21780.filt.* | UW.Fetal_Intestine_Large.ChromatinAccessibility.H-23769.DS17313.filt.* | E084 | E084 | 30000000 | 16222704 | 30000000 | 20631600 | 26696288 | 30000000 | 28573947 | 28689628 | 1.010833 | 1.092926 | 1.038291 | 1.992094 | 1.082901 | 1.036695 | 1.455577 | 1.578798 | 0.5765464 | 0.5028508 | 1.022976 | 1.35604 | 1.147763 | 0.9108263 | 1.285501 | 1.013391 | |||||||||||||||||||||||||||||||||||||
95 | E109 | 92 | Digestive | #C58DAA | GI.S.INT | -1 | 1 | 0 | 0 | 0 | Small Intestine | Small_Intestine | GI_INTESTINE | PrimaryTissue | UCSD | 3Y, 34Y | Male | SOLID | Caucasian/African American, Caucasian | C | STL001;STL003 | Class 2 | UCSD.Small_Intestine.Input.STL001.filt.* | UCSD.Small_Intestine.H3K9me3.STL001.filt.* | UCSD.Small_Intestine.H3K27me3.STL001.filt.* | UCSD.Small_Intestine.H3K4me3.STL003.filt.* | UCSD.Small_Intestine.H3K4me1.STL001.filt.* | UCSD.Small_Intestine.H3K36me3.STL001.filt.* | UCSD.Small_Intestine.H3K27ac.STL001.filt.* | UW.Small_Intestine.ChromatinAccessibility.STL003.DNase.DS20770.filt.* | E109 | E109 | 30000000 | 8151498 | 29634927 | 10595509 | 17317783 | 8439760 | 30000000 | 45831607 | 1.034712 | 1.069889 | 1.066567 | 1.179865 | 1.045337 | 1.055134 | 1.435848 | 1.89525 | 0.8429796 | 0.4001241 | 1.390163 | 0.8981828 | 1.091316 | 0.610715 | 1.342137 | 1.008623 | |||||||||||||||||||||||||||||||||||||
96 | E106 | 93 | Digestive | #C58DAA | GI.CLN.SIG | 1 | 1 | 1 | 0 | 0 | Sigmoid Colon | Sigmoid_Colon | GI_COLON | PrimaryTissue | UCSD | 3Y, 34Y | Male | SOLID | Caucasian/African American, Caucasian | C | STL001;STL003 | Class 2 | UCSD.Sigmoid_Colon.Input.STL001.filt.*;UCSD.Sigmoid_Colon.Input.STL003.filt.* | UCSD.Sigmoid_Colon.H3K9me3.STL003.filt.*;UCSD.Sigmoid_Colon.H3K9me3.STL001.filt.* | UCSD.Sigmoid_Colon.H3K27me3.STL001.filt.*;UCSD.Sigmoid_Colon.H3K27me3.STL003.filt.* | UCSD.Sigmoid_Colon.H3K4me3.STL001.filt.* | UCSD.Sigmoid_Colon.H3K4me1.STL003.filt.*;UCSD.Sigmoid_Colon.H3K4me1.STL001.filt.* | UCSD.Sigmoid_Colon.H3K36me3.STL001.filt.*;UCSD.Sigmoid_Colon.H3K36me3.STL003.filt.* | UCSD.Sigmoid_Colon.H3K27ac.STL003.filt.*;UCSD.Sigmoid_Colon.H3K27ac.STL001.filt.* | E106 | E106 | 30000000 | 30000000 | 30000000 | 15535345 | 30000000 | 30000000 | 30000000 | 1.025954 | 1.039833 | 1.055477 | 1.189927 | 1.044177 | 1.052925 | 1.334267 | 1.054549 | 0.5772917 | 1.005833 | 1.132018 | 1.091846 | 0.9188744 | 1.372905 | |||||||||||||||||||||||||||||||||||||||||
97 | E075 | 94 | Digestive | #C58DAA | GI.CLN.MUC | -1 | 0 | 0 | 1 | 1 | Colonic Mucosa | Colonic_Mucosa | GI_COLON | PrimaryTissue | BI | 73Y | Female | SOLID | Caucasian | SD | 32 | Class 4 | BI.Colonic_Mucosa.Input.32.filt.* | BI.Colonic_Mucosa.H3K9me3.32.filt.* | BI.Colonic_Mucosa.H3K27me3.32.filt.* | BI.Colonic_Mucosa.H3K4me3.32.filt.* | BI.Colonic_Mucosa.H3K4me1.32.filt.* | BI.Colonic_Mucosa.H3K36me3.32.filt.* | BI.Colonic_Mucosa.H3K27ac.32.filt.* | BI.Colonic_Mucosa.H3K9ac.32.filt.* | E075 | 17597438 | 11472457 | 11917259 | 12171088 | 12035520 | 13166426 | 16157458 | 11223367 | 1.010388 | 1.039756 | 1.038763 | 1.939885 | 1.072559 | 1.039407 | 1.303629 | 1.207771 | 0.2881255 | 0.2307447 | 0.6217836 | 1.217938 | 0.8975174 | 0.6353108 | 1.440702 | 1.151889 | ||||||||||||||||||||||||||||||||||||||
98 | E101 | 95 | Digestive | #C58DAA | GI.RECT.MUC.29 | 1 | 0 | 1 | 0 | 0 | Rectal Mucosa Donor 29 | Rectal_Mucosa.Donor_29 | GI_RECTUM | PrimaryTissue | BI | 50Y | Female | SOLID | Caucasian | SD | 29 | Class 4 | BI.Rectal_Mucosa.Input.29.filt.* | BI.Rectal_Mucosa.H3K9me3.29.filt.* | BI.Rectal_Mucosa.H3K27me3.29.filt.* | BI.Rectal_Mucosa.H3K4me3.29.filt.* | BI.Rectal_Mucosa.H3K4me1.29.filt.* | BI.Rectal_Mucosa.H3K36me3.29.filt.* | BI.Rectal_Mucosa.H3K27ac.29.filt.* | BI.Rectal_Mucosa.H3K9ac.29.filt.* | E101 | 30000000 | 25399408 | 28331555 | 27217596 | 22245786 | 29628167 | 17742431 | 25567948 | 1.009318 | 1.020948 | 1.020978 | 1.443144 | 1.056483 | 1.037125 | 1.380416 | 1.076432 | 0.3565481 | 0.3032903 | 0.8069324 | 1.182764 | 1.25515 | 0.8426888 | 1.43894 | 1.244865 | ||||||||||||||||||||||||||||||||||||||
99 | E102 | 96 | Digestive | #C58DAA | GI.RECT.MUC.31 | 1 | 0 | 1 | 0 | 0 | Rectal Mucosa Donor 31 | Rectal_Mucosa.Donor_31 | GI_RECTUM | PrimaryTissue | BI | 61Y | Female | SOLID | Caucasian | SD | 31 | Class 4 | BI.Rectal_Mucosa.Input.31.filt.* | BI.Rectal_Mucosa.H3K9me3.31.filt.* | BI.Rectal_Mucosa.H3K27me3.31.filt.* | BI.Rectal_Mucosa.H3K4me3.31.filt.* | BI.Rectal_Mucosa.H3K4me1.31.filt.* | BI.Rectal_Mucosa.H3K36me3.31.filt.* | BI.Rectal_Mucosa.H3K27ac.31.filt.* | BI.Rectal_Mucosa.H3K9ac.31.filt.* | E102 | 30000000 | 30000000 | 30000000 | 21058139 | 23897111 | 30000000 | 15885968 | 19135054 | 1.01162 | 1.017626 | 1.020597 | 1.389971 | 1.070317 | 1.029542 | 1.584168 | 1.265021 | 0.4821959 | 0.3544357 | 0.9249917 | 1.182506 | 1.113488 | 0.782425 | 1.491957 | 1.478482 | ||||||||||||||||||||||||||||||||||||||
100 | E110 | 97 | Digestive | #C58DAA | GI.STMC.MUC | 0 | -1 | 0 | 0 | 0 | Stomach Mucosa | Stomach_Mucosa | GI_STOMACH | PrimaryTissue | BI | 59Y | Male | SOLID | Caucasian | SD | 157 | Class 5 | BI.Stomach_Mucosa.Input.157.filt.* | BI.Stomach_Mucosa.H3K9me3.157.filt.* | BI.Stomach_Mucosa.H3K27me3.157.filt.* | BI.Stomach_Mucosa.H3K4me3.157.filt.* | BI.Stomach_Mucosa.H3K4me1.157.filt.* | BI.Stomach_Mucosa.H3K36me3.157.filt.* | BI.Stomach_Mucosa.H3K9ac.157.filt.* | E110 | 30000000 | 20887596 | 30000000 | 23950798 | 27797421 | 30000000 | 26918659 | 1.009982 | 1.018062 | 1.020676 | 1.032078 | 1.053337 | 1.012054 | 1.111716 | 0.4280035 | 0.3114733 | 0.8193452 | 0.6480966 | 1.05441 | 0.4652245 | 1.377121 |