Ercan_Lab_Data_WS220

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R	S	T	U	V	W	X	Y	Z	AA	AB	AC	AD	AE	AF	AG	AH	AI	AJ
1		Submission Date	Submission name (ID)	Descriptive name	Library number (this number is your individual unique number from your own library google sheet.)	Experiment type (RNA-seq, ChIP-seq, DNA-seq)	Experimental Protocols	Library Protocol	Experiment Description	Type of sequencing	Index	Lane	Bioanalyzer or agarose gel	Bioanalyzer or agarose gel Lane	Average fragment length used for library qPCR estimation	Submission Document	Antibody (if ChIP-seq experiment)	ChIP target	ChIP extract	Matching Input	Replicate	Flowcell ID	Read length (bp)	Paired/Single	Genome mapped	Mapping software	Total reads (or read pairs)	Mapped reads	% mapped reads	percent duplicates	percent mitochondrial reads (for ATAC-seq data)	MACs e-5	MACs e-10	Worked?	Comment	published?

2	2710	01/08/2025	DO150	RPC-1_Q4663_ERC94_1h_noauxin_L2L3_ext795	1852	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	1	NextSeq 500	gel		400		Q4663	RPC-1	ext795	DO155		HHJ73BGYW	75	single	ce10	bowtie2.4.2	23,386,732	16,258,456	69.52	34.00%
3	2711	01/08/2025	DO151	RPC-1_Q4663_ERC94_1h_noauxin_L2L3_ext796	1853	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	2	NextSeq 500	gel		400		Q4663	RPC-1	ext796	DO156		HHJ73BGYW	75	single	ce10	bowtie2.4.2	25,076,488	18,343,451	73.15	41.40%
4	2712	01/08/2025	DO152	GFP_ab290_ERC94_1h_noauxin_L2L3_ext795	1854	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	3	NextSeq 500	gel		400		ab290	GFP (TFTC3)	ext795	DO155		HHJ73BGYW	75	single	ce10	bowtie2.4.2	23,997,593	16,375,957	68.24	31.00%
5	2713	01/08/2025	DO153	GFP_ab290_ERC94_1h_noauxin_L2L3_ext796	1855	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	4	NextSeq 500	gel		400		ab290	GFP (TFTC3)	ext796	DO156		HHJ73BGYW	75	single	ce10	bowtie2.4.2	31,124,161	27,171,393	87.3	30.60%
6	2714	01/08/2025	DO154	GFP_ab290_ERC94_1h_auxin_L2L3_ext647	1856	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	5	NextSeq 500	gel		400		ab290	GFP (TFTC3)	ext647	DO51		HHJ73BGYW	75	single	ce10	bowtie2.4.2	31,820,773	23,136,884	72.71	31.50%
7	2715	01/08/2025	DO155	input_ERC94_1h_noauxin_L2L3_ext795	1857	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	6	NextSeq 500	gel		400		-	-	ext795	-		HHJ73BGYW	75	single	ce10	bowtie2.4.2	25,302,658	24,366,460	96.3	13.00%
8	2716	01/08/2025	DO156	input_ERC94_1h_noauxin_L2L3_ext796	1858	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	7	NextSeq 500	gel		400		-	-	ext796	-		HHJ73BGYW	75	single	ce10	bowtie2.4.2	27,498,691	26,701,229	97.1	12.70%
9	2717	01/08/2025	DO157	RPC-1_Q4663_ERC94_1h_auxin_L2L3_ext799	1865	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	14	NextSeq 500	gel		400		Q4663	RPC-1	ext799	DO161		HHJ73BGYW	75	single	ce10	bowtie2.4.2	22,674,771	7,652,735	33.75	43.90%
10	2718	01/08/2025	DO158	TBP-1_Q2952_CA1200_1h_auxin_L2L3_ext800	1866	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	15	NextSeq 500	gel		400		Q2952	TBP-1	ext800	DO162		HHJ73BGYW	75	single	ce10	bowtie2.4.2	23,165,741	10,433,850	45.04	33.00%
11	2719	01/08/2025	DO159	RPC-1_Q4663_CA1200_1h_auxin_L2L3_ext800	1867	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	16	NextSeq 500	gel		400		Q4663	RPC-1	ext800	DO162		HHJ73BGYW	75	single	ce10	bowtie2.4.2	21,192,568	6,976,593	32.92	36.20%
12	2720	01/08/2025	DO160	SFC-1_Q4526_CA1200_1h_auxin_L2L3_ext800	1868	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	18	NextSeq 500	gel		400		Q4526	SFC-1/TFTC-5	ext800	DO162		HHJ73BGYW	75	single	ce10	bowtie2.4.2	20,613,895	7,470,476	36.24	31.80%
13	2721	01/08/2025	DO161	input_ERC94_1h_auxin_L2L3_ext799	1869	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	19	NextSeq 500	gel		400		-	-	ext799	-		HHJ73BGYW	75	single	ce10	bowtie2.4.2	22,032,462	21,497,073	97.57	12.00%
14	2722	01/08/2025	DO162	input_CA1200_1h_auxin_L2L3_ext800	1870	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	21	NextSeq 500	gel		400		-	-	ext800	-		HHJ73BGYW	75	single	ce10	bowtie2.4.2	23,142,543	22,503,809	97.24	12.10%
15	2723	01/08/2025	DR16	GFP_ab290_HML1390_L1_ext797	1859	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	8	NextSeq 500	gel		400		ab290	GFP	ext797	DR18		HHJ73BGYW	75	single	ce10	bowtie2.4.2	24,691,188	13,808,664	55.93	17.10%
16	2724	01/08/2025	DR17	8WG16_Millipore_HML1390_L1_ext797	1860	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	9	NextSeq 500	gel		400		Millipore 05-952-I-100UG	8WG16	ext797	DR18		HHJ73BGYW	75	single	ce10	bowtie2.4.2	26,127,798	18,110,617	69.32	13.20%
17	2725	01/08/2025	DR18	input_HML1390_L1_ext797	1861	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	10	NextSeq 500	gel		400		-	-	ext797	-		HHJ73BGYW	75	single	ce10	bowtie2.4.2	24,470,660	16,820,641	68.74	11.70%
18	2726	01/08/2025	DR19	GFP_ab290_HML1390_L1_ext798	1862	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	11	NextSeq 500	gel		400		ab290	GFP	ext798	DR21		HHJ73BGYW	75	single	ce10	bowtie2.4.2	26,247,334	16,420,976	62.56	13.10%
19	2727	01/08/2025	DR20	8WG16_Millipore_HML1390_L1_ext798	1863	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	12	NextSeq 500	gel		400		Millipore 05-952-I-100UG	8WG16	ext798	DR21		HHJ73BGYW	75	single	ce10	bowtie2.4.2	32,715,209	25,303,561	77.34	14.50%
20	2728	01/08/2025	DR21	input_HML1390_L1_ext798	1864	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	13	NextSeq 500	gel		400		-	-	ext798	-		HHJ73BGYW	75	single	ce10	bowtie2.4.2	24,649,409	18,802,062	76.28	10.30%
21	2729	1/24/2025	YZ75	DPY-27_JL(3-11-20)_YZ03_1h_auxin_L2L3_ext802	1865	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	23	NextSeq 500	gel		400				ext802	YZ77	1	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	15,925,810	9,969,890	62.6	32.40%					map to real genome: 9949950 (62.48%)
22	2730	1/24/2025	YZ76	SMC-3_Q4469_YZ03_1h_auxin_L2L3_ext802	1866	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	25	NextSeq 500	gel		400				ext802	YZ77	1	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	14,544,098	9,889,398	68	31.70%					map to real genome: 9888970 (67.99%)
23	2731	1/24/2025	YZ77	input_YZ03_1h_auxin_L2L3_ext802	1867	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	27	NextSeq 500	gel		400				ext802	-	1	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	25,305,053	21,011,330	83.03	13.40%					map to real genome: 21011026 (83.03%)
24	2732	1/24/2025	YZ78	GFP_TOP-2_ab290_YZ03_1h_auxin_L2L3_ext802	1868	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	1	NextSeq 500	gel		400				ext802	YZ77	1	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	17,646,425	9,657,286	54.73	33.10%					map to real genome: 9656395 (54.72%)
25	2733	1/24/2025	YZ79	GFP_AMA-1_ab290_JK07_1h_auxin_L2L3_ext801	1869	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	2	NextSeq 500	gel		400				ext801	YZ82	2	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	5,414,759	2,781,607	51.37	24.30%					map to real genome: 2781270 (51.36%)
26	2734	1/24/2025	YZ80	DPY-27_JL(3-11-20)_JK07_1h_auxin_L2L3_ext801	1870	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	3	NextSeq 500	gel		400				ext801	YZ82	2	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	11,014,887	8,033,772	72.94	29.30%					map to real genome: 8002036 (72.65%)
27	2735	1/24/2025	YZ81	SMC-3_Q4469_JK07_1h_auxin_L2L3_ext801	1871	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	4	NextSeq 500	gel		400				ext801	YZ82	2	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	14,012,703	9,565,769	68.26	27.10%					map to real genome: 9565246 (68.26%)
28	2736	1/24/2025	YZ82	input_JK07_1h_auxin_L2L3_ext801	1872	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	5	NextSeq 500	gel		400				ext803	-	2	HKL2MBGYW	75	single	ce10-JK07	bowtie2.4.2	11,014,887	8,033,772	72.94	10.40%					map to real genome: 8002036 (72.65%)
29	2737	1/24/2025	YZ83	GFP_ab290_LRB546_dauer_ext803	1873	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	6	NextSeq 500	gel		400				ext803	YZ84	2	HKL2MBGYW	75	single	ce10	bowtie2.4.2	31,888,535	25,798,080	80.9	16.50%
30	2738	1/24/2025	YZ84	input_LRB546_dauer_ext803	1874	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	7	NextSeq 500	gel		400					-	2	HKL2MBGYW	75	single	ce10	bowtie2.4.2	24,660,694	20,237,693	82.06	11.80%
31	2739	1/24/2025	AA97	H4K20me1_ab9051_PS9179_mixed_early_larvae_ext804	1891	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	8	NextSeq 500	gel		400		ab9051	H4K20me1	ext804	AA103	1	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	61,067,816	55,271,528	90.51	42.80%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
32	2740	1/24/2025	AA98	H3K4me3_ab8580_PS9179_mixed_early_larvae_ext804	1892	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	9	NextSeq 500	gel		400		ab8580	H3K4me3	ext804	AA103	1	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	53,283,612	50,836,232	95.41	41.40%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
33	2741	1/24/2025	AA99	IgG_ab46540_PS9179_mixed_early_larvae_ext804	1893	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	10	NextSeq 500	gel		400		ab46540	IgG	ext804	AA103	1	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	42,094,666	19,572,973	46.50	55.20%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
34	2742	1/24/2025	AA100	H4K20me1_ab9051_PS9179_mixed_early_larvae_ext805	1894	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	11	NextSeq 500	gel		400		ab9051	H4K20me1	ext805	AA104	2	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	52,460,919	47,554,898	90.65	41.80%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
35	2743	1/24/2025	AA101	H3K4me3_ab8580_PS9179_mixed_early_larvae_ext805	1895	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	12	NextSeq 500	gel		400		ab8580	H3K4me3	ext805	AA104	2	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	68,551,213	65,807,945	96.00	45.70%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
36	2744	1/24/2025	AA102	IgG_ab46540_PS9179_mixed_early_larvae_ext805	1896	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	13	NextSeq 500	gel		400		ab46540	IgG	ext805	AA104	2	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	29,721,829	24,264,880	81.64	58.00%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
37	2745	1/24/2025	AA103	input_PS9179_mixed_early_larvae_ext804	1897	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	14	NextSeq 500	gel		400		-	-	ext804	-	1	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	32,732,205	29,581,693	90.37	30.40%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
38	2746	1/24/2025	AA104	input_PS9179_mixed_early_larvae_ext805	1898	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	15	NextSeq 500	gel		400		-	-	ext805	-	2	HKL2MBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie2.4.2	33,712,865	30,618,079	90.82	30.90%				Yes	trimmed adapters first with Trimmomatic (v 0.39) with following parameters. ILLUMINACLIP:TruSeq3-SE.fa:2:30:10 MINLEN:5	GSE267962
39	2747	03/12/2025	HW101	AZ02_0hr_auxin_L3_mRNA_rep1		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	1	NextSeq 500	gel		400						1	AHNWJKBGYW	75	single	ce10	hisat2	36,168,478	31,247,439	86.39	71.40%
40	2748	03/12/2025	HW102	AZ02_1hr_auxin_L3_mRNA_rep1		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	3	NextSeq 500	gel		400					HW101	1	AHNWJKBGYW	75	single	ce10	hisat2	26,495,407	23,329,420	88.05	65.20%
41	2749	03/12/2025	HW103	AZ02_2hr_auxin_L3_mRNA_rep1		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	4	NextSeq 500	gel		400					HW101	1	AHNWJKBGYW	75	single	ce10	hisat2	38,938,290	34,596,377	88.85	69.10%
42	2750	03/12/2025	HW104	AZ02_0hr_auxin_L3_mRNA_rep2		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	5	NextSeq 500	gel		400						2	AHNWJKBGYW	75	single	ce10	hisat2	62,727,941	54,435,044	86.78	77.90%
43	2751	03/12/2025	HW105	AZ02_1hr_auxin_L3_mRNA_rep2		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	6	NextSeq 500	gel		400					HW104	2	AHNWJKBGYW	75	single	ce10	hisat2	42,470,286	37,751,399	88.89	73.10%
44	2752	03/12/2025	HW106	AZ02_2hr_auxin_L3_mRNA_rep2		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	7	NextSeq 500	gel		400					HW104	2	AHNWJKBGYW	75	single	ce10	hisat2	12,913,611	11,376,441	88.1	59.60%
45	2753	03/12/2025	YZ79_re	GFP_AMA-1_ab290_JK07_1h_auxin_L2L3_ext801	1875	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	2	NextSeq 500	gel		400		GFP(AMA-1)	ab290	ext801	YZ82	2_reseq	HNWJKBGYW	75	single	ce10	bowtie2.4.2	12,731,004 (7316245)	6,560,870 (3,779,263)	51.53 (51.66)	30.80%
46	2754	03/12/2025	YZ85	GFP_TOP-2_ab290_YZ03_1h_auxin_L2L3_ext806	1899	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	8	NextSeq 500	gel		400		GFP(TOP-2)	ab290	ext806	YZ90	2	HNWJKBGYW	75	single	ce10	bowtie2.4.2	12,276,735	8,728,425	71.1	27.00%
47	2755	03/12/2025	YZ86	DPY-27_JL(3-11-20)_YZ03_1h_auxin_L2L3_ext806	1900	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	9	NextSeq 500	gel		400		DPY-27	JL(3-11-20)	ext806	YZ90	2	HNWJKBGYW	75	single	ce10	bowtie2.4.2	23,537,519	17,479,946	74.26	31.10%
48	2756	03/12/2025	YZ87	SMC-3_Q4469_YZ03_1h_auxin_L2L3_ext806	1901	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	10	NextSeq 500	gel		400		SMC-3	Q4469	ext806	YZ90	2	HNWJKBGYW	75	single	ce10	bowtie2.4.2	18,730,678	14,150,846	87.23	25.00%
49	2757	03/12/2025	YZ88	DPY-27_JL(3-11-20)_CA1200_1h_auxin_L2L3_ext807	1902	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	11	NextSeq 500	gel		400		DPY-27	JL(3-11-20)	ext807	YZ91	1	HNWJKBGYW	75	single	ce10	bowtie2.4.2	23,956,854	18,468,150	77.09	35.10%
50	2758	03/12/2025	YZ89	DPY-27_JL(3-11-20)_CA1200_1h_auxin_L2L3_ext808	1903	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	12	NextSeq 500	gel		400		DPY-27	JL(3-11-20)	ext808	YZ92	2	HNWJKBGYW	75	single	ce10	bowtie2.4.2	20,291,373	16,341,358	80.53	35.20%
51	2759	03/12/2025	YZ90	input_YZ03_1h_auxin_L2L3_ext806	1904	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	13	NextSeq 500	gel		400		-	-	ext806	-	2	HNWJKBGYW	75	single	ce10	bowtie2.4.2	18,513,750	15,278,917	82.53	10.30%
52	2760	03/12/2025	YZ91	input_CA1200_1h_auxin_L2L3_ext807	1905	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	14	NextSeq 500	gel		400		-	-	ext807	-	1	HNWJKBGYW	75	single	ce10	bowtie2.4.2	16,682,106	13,840,342	82.97	10.60%
53	2761	03/12/2025	YZ92	input_CA1200_1h_auxin_L2L3_ext808	1906	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	15	NextSeq 500	gel		400		-	-	ext808	-	2	HNWJKBGYW	75	single	ce10	bowtie2.4.2	14,171,888	11,746,349	82.88	9.40%
54	2762	03/12/2025	AA105	H4K20me1_ab9051_PS312_J2-J3_ext809	1907	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	16	NextSeq 500	gel		400		ab9051	H4K20me1	ext809	AA111	3	HNWJKBGYW	75	single	https://doi.org/10.1093/molbev/msaf270	bowtie 2.4.2	19,450,026	18,804,225	96.68	14.10%				Yes		GSE267962
55	2763	03/12/2025	AA106	H3K4me3_ab8580_PS312_J2-J3_ext809	1908	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	18	NextSeq 500	gel		400		ab8580	H3K4me3	ext809	AA111	3	HNWJKBGYW	75	single	https://doi.org/10.1093/molbev/msaf270	bowtie 2.4.2	20,268,401	19,758,223	97.48	21.40%				Yes		GSE267962
56	2764	03/12/2025	AA107	H3K27ac_ab4729_PS312_J2-J3_ext809	1909	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	19	NextSeq 500	gel		400		ab4729	H3K27ac	ext809	AA111	3	HNWJKBGYW	75	single	https://doi.org/10.1093/molbev/msaf270	bowtie 2.4.2	25,208,570	24,563,678	97.44	14.10%				Yes		Avrami's thesis
57	2765	03/12/2025	AA108	H4K20me1_ab9051_PS9179_mixed_early_larvae_ext810	1910	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	20	NextSeq 500	gel		400		ab9051	H4K20me1	ext810	AA112	3	HNWJKBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie 2.4.2	28,586,731	25,812,228	90.29	33.30%				Yes		GSE267962
58	2766	03/12/2025	AA109	H3K4me3_ab8580_PS9179_mixed_early_larvae_ext810	1911	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	21	NextSeq 500	gel		400		ab8580	H3K4me3	ext810	AA112	3	HNWJKBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie 2.4.2	28,052,827	26,656,707	95.02	29.40%				Yes		GSE267962
59	2767	03/12/2025	AA110	H4K20me2-3_ab78517_PS9179_mixed_early_larvae_ext810	1912	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	22	NextSeq 500	gel		400		ab78517	H4K20me2/3	ext810	AA112	1	HNWJKBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie 2.4.2	16,143,520	15,228,738	94.33	27.60%				Yes	Result: de-enriched on the X chromosome
60	2768	03/12/2025	AA111	input_PS312_J2-J3_ext809	1913	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	23	NextSeq 500	gel		400		-	-	ext809	-	3	HNWJKBGYW	75	single	https://doi.org/10.1093/molbev/msaf270	bowtie 2.4.2	14,157,163	12,861,219	90.85	8.70%				Yes		GSE267962
61	2769	03/12/2025	AA112	input_PS9179_mixed_early_larvae_ext810	1914	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		single end	25	NextSeq 500	gel		400		-	-	ext810	-	3	HNWJKBGYW	75	single	PRJNA982879 (WBPS19), chromosomes only	bowtie 2.4.2	15,949,851	14,354,610	90.00	24.10%				Yes		GSE267962
62	2770	4/24/2025	YZ93	YZ05_dauer_ArimaHiChigcov_col1715_rep1	-	HiC	Ercan_Arima_HiC_Celegans_Larva_Protocol_v2_4enzyme.pdf	Arima-HiC_KAPA_HyperPrep_A160139_v00_optimal_sonication_v2.pdf		paired end	UDI0001	Aviti ML - CB Third Party Linear 2x150 Freestyle High	Tape station		550						1	A2444450009	150	Paired	ce10	juicer 1.5.7									see HiC tab for stats
63	2771	4/24/2025	YZ94	YZ05_dauer_ArimaHiChigcov_col1718_rep2	-	HiC	Ercan_Arima_HiC_Celegans_Larva_Protocol_v2_4enzyme.pdf	Arima-HiC_KAPA_HyperPrep_A160139_v00_optimal_sonication_v2.pdf		paired end	UDI0002	Aviti ML - CB Third Party Linear 2x150 Freestyle High	Tape station		550						2	A2444450009	150	Paired	ce10	juicer 1.5.7									see HiC tab for stats
64	2772	4/24/2025	YZ95	YZ04_L3_1h_auxin_ArimaHiChighcov_col1638_rep1	-	HiC	Ercan_Arima_HiC_Celegans_Larva_Protocol_v2_4enzyme.pdf	Arima-HiC_KAPA_HyperPrep_A160139_v00_optimal_sonication_v2.pdf		paired end	UDI0003	Aviti ML - CB Third Party Linear 2x150 Freestyle High	Tape station		550						1	A2444450009	150	Paired	ce10	juicer 1.5.7									see HiC tab for stats
65	2773	4/24/2025	YZ96	YZ04_L3_1h_auxin_ArimaHiChighcov_col1739_rep2	-	HiC	Ercan_Arima_HiC_Celegans_Larva_Protocol_v2_4enzyme.pdf	Arima-HiC_KAPA_HyperPrep_A160139_v00_optimal_sonication_v2.pdf		paired end	UDI0004	Aviti ML - CB Third Party Linear 2x150 Freestyle High	Tape station		550						2	A2444450009	150	Paired	ce10	juicer 1.5.7									see HiC tab for stats
66	2774	4/24/2025	DO97_KAPA	input_JEL1197_males_L2L3_ext725	1881	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0065	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	18,606,299	12,139,652	65.24	15.70%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
67	2775	4/24/2025	DO98_KAPA	input_JEL1197_males_L2L3_ext726	1882	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0066	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	18,433,509	7,779,623	42.2	27.10%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
68	2776	4/24/2025	DO99_KAPA	RPC-1_Q4463_JEL1197_males_L2L3_ext725	1883	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0067	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	11,639,617	632,611	5.43	33.40%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
69	2777	4/24/2025	DO100_KAPA	TBP-1_Q2952_JEL1197_males_L2L3_ext725	1884	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0068	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	26,168,840	1,751,947	6.69	49.50%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
70	2778	4/24/2025	DO101_KAPA	TFTC-5_Q4526_JEL1197_males_L2L3_ext725	1885	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0069	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	11,708,458	447,928	3.83	33.00%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
71	2779	4/24/2025	DO102_KAPA	IgG_ab46540_JEL1197_males_L2L3_ext725	1886	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0070	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	16,132,031	615,806	3.82	38.60%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
72	2780	4/24/2025	DO103_KAPA	8WG16_Millipore_JEL1197_males_L2L3_ext725	1887	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0071	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	21,297,683	2,659,956	12.49	40.30%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
73	2781	4/24/2025	DO104_KAPA	TFTC-5_Q4526_JEL1197_males_L2L3_ext726	1888	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0072	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	13,412,272	570,002	4.25	32.80%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
74	2782	4/24/2025	DO105_KAPA	TBP-1_Q2952_JEL1197_males_L2L3_ext726	1889	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0073	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	19,538,202	1,673,765	8.57	34.40%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
75	2783	4/24/2025	DO106_KAPA	IgG_ab46540_JEL1197_males_L2L3_ext726	1890	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	KAPA-HyperPrep-ChIP-mRNA_vs1.pdf		paired end	UDI0074	Aviti ML - CB Third Party Linear 2x150 Freestyle High	gel		400							A2444450009	150	Paired	ce10	bowtie 2.4.2	12,351,989	957,816	7.75	29.40%					the mapping stats are with 75 bp trimmed R1 only regular pipeline with SE
76	2784	05/13/25	YZ97	8WG16_Millipore_YZ05_dauer_ext815	1891	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	11	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Millipore 05-952-I-100UG	8WG16	ext815	YZ99	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	78,705,796	61,788,313	78.51	38.00%					Use R1 only and ChIP seq pipeline 11.2
77	2785	05/13/25	YZ98	8WG16_Millipore_YZ05_dauer_ext816	1892	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	12	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Millipore 05-952-I-100UG	8WG16	ext816	YZ100	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	95,526,159	80,234,628	83.99	36.90%					Use R1 only and ChIP seq pipeline 11.2
78	2786	05/13/25	YZ99	input_YZ05_dauer_ext815	1893	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	13	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext815	-	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	97,106,651	80,450,257	82.85	23.40%					Use R1 only and ChIP seq pipeline 11.2
79	2787	05/13/25	YZ100	input_YZ05_dauer_ext816	1894	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	14	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext816	-	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	82,709,172	68,441,128	82.75	20.80%					Use R1 only and ChIP seq pipeline 11.2
80	2788	05/13/25	HW107	JK05_2hr_auxin_L3_mRNA_rep1		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	25	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	-	-	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	58,785,896	51,980,231	88.42	47.00%
81	2789	05/13/25	HW108	JK05_2hr_auxin_L3_mRNA_rep2		mRNA-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	27	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	-	-	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	57,634,228	50,710,217	87.99	75.90%
82	2790	05/13/25	HW109	input_DR02_1h_auxin_L2L3_ext811	1915	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	1	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext811	-	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	20,105,041	16,755,400	83.34	9.40%
83	2791	05/13/25	HW110	8WG16_Millipore_DR02_1h_aux_L2L3_ext811	1916	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	2	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Millipore 05-952-I-100UG	8WG16	ext811	HW109	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	16,982,374	10,437,761	61.49	36.50%
84	2792	05/13/25	HW111	PQN85_Q4481_DR02_1h_aux_L2L3_ext811	1917	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	3	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4481	PQN-85	ext811	HW109	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	6,393,852	3,350,325	52.47	38.80%
85	2793	05/13/25	HW112	SMC3_Q4469_DR02_1h_aux_L2L3_ext811	1918	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	4	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4469	SMC-3	ext811	HW109	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	8,025,088	4,635,456	57.76	37.70%
86	2794	05/13/25	HW113	input_DR02_1h_auxin_L2L3_ext812	1919	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	5	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext812	-	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	24,616,147	14,705,402	59.74	13.90%
87	2795	05/13/25	HW114	8WG16_Millipore_DR02_1h_aux_L2L3_ext812	1920	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	6	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Millipore 05-952-I-100UG	8WG16	ext812	HW113	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	18,613,863	11,936,821	64.13	56.20%
88	2796	05/13/25	HW115	PQN85_Q4481_DR02_1h_aux_L2L3_ext812	1921	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	7	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4481	PQN-85	ext812	HW113	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	11,703,916	6,205,567	53.02	25.40%
89	2797	05/13/25	HW116	SMC3_Q4469_DR02_1h_aux_L2L3_ext812	1922	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	8	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4469	SMC-3	ext812	HW113	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	18,187,006	9,982,104	54.89	49.90%
90	2798	05/13/25	HW117	input_AD100_1h_auxin_L2L3_ext813	1923	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	9	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext813	-	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	21,692,419	12,506,079	57.65	12.70%
91	2799	05/13/25	HW118	PQN85_Q4481_AD100_1h_aux_L2L3_ext813	1924	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	10	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4481	PQN-85	ext813	HW117	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	13,637,660	8,892,927	65.21	31.20%
92	2800	05/13/25	HW119	SMC3_Q4469_AD100_1h_aux_L2L3_ext813	1935	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	15	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4469	SMC-3	ext813	HW117	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	50,526,775	31,437,684	62.22	51.60%
93	2801	05/13/25	HW120	input_AD100_1h_auxin_L2L3_ext814	1936	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	16	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext814	-	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	83,077,651	67,237,968	80.93	20.40%
94	2802	05/13/25	HW121	PQN85_Q4481_AD100_1h_aux_L2L3_ext814	1937	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	18	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4481	PQN-85	ext814	HW120	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	10,489,614	5,933,324	56.56	22.60%
95	2803	05/13/25	HW122	SMC3_Q4469_AD100_1h_aux_L2L3_ext814	1938	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	19	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Q4469	SMC-3	ext814	HW120	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	23,459,439	16,252,300	69.28	36.80%
96	2804	05/13/25	HW123	input_AZ02_1h_auxin_L2L3_ext818	1939	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	20	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext818	-	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	80,136,639	63,793,675	79.61	19.90%
97	2805	05/13/25	HW124	8WG16_Millipore_AZ02_1h_aux_L2L3_ext818	1940	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	21	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Millipore 05-952-I-100UG	8WG16	ext818	HW123	1	B2444454835	75	Paired	ce10	bowtie 2.4.2	80,300,558	27,716,416	34.52	54.80%
98	2806	05/13/25	HW125	input_AZ02_1h_auxin_L2L3_ext819	1941	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	22	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		-	-	ext819	-	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	70,584,843	6,833,016	9.68	66.10%
99	2807	05/13/25	HW126	8WG16_Millipore_AZ02_1h_aux_L2L3_ext819	1942	ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	23	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400		Millipore 05-952-I-100UG	8WG16	ext819	HW125	2	B2444454835	75	Paired	ce10	bowtie 2.4.2	63,580,970	8,268,666	13	33.30%
100	2808	05/22/25	DO163	SMC3_Q4469_CA1200_22h_auxin_L2L3_ext817		ChIP-seq	Worm_ChIP_Extract_Preparation_SE_v9, Chromatin_Immunoprecipitation_SE_v2	Ercan_Homemade_Library_Prep_v7_ChIP		paired end	1	Aviti ML - CB Third Party Linear 2x75 Freestyle High	gel		400							A2445529914	75	Paired	ce10	bowtie 2.4.2	27,276,958	19,852,170	72.78	20.60%