Ancient Iberian Genomes Y-SNPs
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1
sample_aliasbase_countsubmitted_ftpsra_ftp
study_accession
sample_accession
secondary_sample_accession
experiment_accession
run_accession
instrument_model
library_layout
experiment_title
2
LU3391381153952912.86
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843829/LU339_duprem30_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843829/LU339_duprem30_realigned.bam.bai
PRJEB29189
SAMEA4976121
ERS2794192ERX2850554ERR2843829NextSeq 500SINGLE
NextSeq 500 sequencing
3
LD2701201481434011.19
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843830/LD270_PE_duprem30_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843830/LD270_PE_duprem30_realigned.bam.bai
PRJEB29189
SAMEA4976122
ERS2794193ERX2850555ERR2843830HiSeq X TenSINGLE
HiSeq X Ten sequencing
4
LD11741076802944110.03
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843831/LD1174_PE_duprem30_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843831/LD1174_PE_duprem30_realigned.bam.bai
PRJEB29189
SAMEA4976123
ERS2794194ERX2850556ERR2843831HiSeq X TenSINGLE
HiSeq X Ten sequencing
5
COV2012611399762831.06
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843828/COV20126-merged_duprem10_merged.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843828/COV20126-merged_duprem10_merged.bam.bai
PRJEB29189
SAMEA4976120
ERS2794191ERX2850553ERR2843828NextSeq 500SINGLE
NextSeq 500 sequencing
6
Eiros227216550.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843837/Eiros2-I-II-merged_rmdup30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843837/Eiros2-I-II-merged_rmdup30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976129
ERS2794200ERX2850562ERR2843837NextSeq 500SINGLE
NextSeq 500 sequencing
7
LD1174-MT24130730.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843835/LD1174_PE_duprem30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843835/LD1174_PE_duprem30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976127
ERS2794198ERX2850560ERR2843835HiSeq X TenSINGLE
HiSeq X Ten sequencing
8
LD270-MT21729880.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843834/LD270_PE_mt_duprem30_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843834/LD270_PE_mt_duprem30_realigned.bam.bai
PRJEB29189
SAMEA4976126
ERS2794197ERX2850559ERR2843834HiSeq X TenSINGLE
HiSeq X Ten sequencing
9
Val0519386060.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843845/Val05_duprem30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843845/Val05_duprem30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976137
ERS2794208ERX2850570ERR2843845
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
10
COV20125-MT17152510.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843836/COV20125-I-II-merged_rmdup30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843836/COV20125-I-II-merged_rmdup30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976128
ERS2794199ERX2850561ERR2843836NextSeq 500SINGLE
NextSeq 500 sequencing
11
LU339-MT17079950.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843833/LU339_duprem30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843833/LU339_duprem30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976125
ERS2794196ERX2850558ERR2843833NextSeq 500SINGLE
NextSeq 500 sequencing
12
COV20126-MT14166490.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843832/COV20126-merged_dedup30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843832/COV20126-merged_dedup30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976124
ERS2794195ERX2850557ERR2843832NextSeq 500SINGLE
NextSeq 500 sequencing
13
Rebolal11513780.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843844/Rebolal_duprem30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843844/Rebolal_duprem30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976136
ERS2794207ERX2850569ERR2843844
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
14
Val1468899260.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843848/Val146_duprem30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843848/Val146_duprem30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976139
ERS2794210ERX2850573ERR2843848
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
15
Val1076487140.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843846/Val107_duprem30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843846/Val107_duprem30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976138
ERS2794209ERX2850571ERR2843846
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
16
LD9036357300.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843838/LD903-I-II-merged_rmdup30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843838/LD903-I-II-merged_rmdup30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976130
ERS2794201ERX2850563ERR2843838NextSeq 500SINGLE
NextSeq 500 sequencing
17
Val3.992383700.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843840/Val3-99_duprem10_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843840/Val3-99_duprem10_mt_realigned.bam.bai
PRJEB29189
SAMEA4976132
ERS2794203ERX2850565ERR2843840NextSeq 500SINGLE
NextSeq 500 sequencing
18
LU6572254170.00
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843839/LU657-I-II-merged_rmdup30_mt_realigned.bam
ftp.sra.ebi.ac.uk/vol1/run/ERR284/ERR2843839/LU657-I-II-merged_rmdup30_mt_realigned.bam.bai
PRJEB29189
SAMEA4976131
ERS2794202ERX2850564ERR2843839NextSeq 500SINGLE
NextSeq 500 sequencing
19
PRJEB29189
SAMEA4976133
ERS2794204ERX2850566ERR2843841
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
20
PRJEB29189
SAMEA4976134
ERS2794205ERX2850567ERR2843842
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
21
PRJEB29189
SAMEA4976135
ERS2794206ERX2850568ERR2843843
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
22
PRJEB29189
SAMEA4976140
ERS2794211ERX2850572ERR2843847
Illumina HiSeq 2500
SINGLE
Illumina HiSeq 2500 sequencing
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