| A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ensg | symbol | chr | start | end | strand | type | entrezID | HUGO | pLI | ncRVIS | posMapSNPs | posMapMaxCADD | eqtlMapSNPs | eqtlMapminP | eqtlMapminQ | eqtlMapts | eqtlDirection | ciMap | ciMapts | minGwasP | IndSigSNPs | GenomicLocus | ||
2 | ENSG00000131584 | ACAP3 | 1 | 1227756 | 1244989 | -1 | protein_coding | 116983 | ACAP3 | 0.03943093022 | NA | 0 | 0 | 7 | 1.67E-06 | 0.01295318235 | eQTLGen_trans_eQTLs | NA | No | NA | NA | rs62064364 | 57 | ||
3 | ENSG00000076864 | RAP1GAP | 1 | 21922708 | 21995801 | -1 | protein_coding | 5909 | RAP1GAP | 0.9741569152 | -0.596613521 | 0 | 0 | 1 | 2.52E-06 | 0.01848071614 | eQTLGen_trans_eQTLs | NA | No | NA | NA | rs115740542 | 22 | ||
4 | ENSG00000134697 | GNL2 | 1 | 38032417 | 38061536 | -1 | protein_coding | 29889 | GNL2 | 0.4530324696 | 0.270727321 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
5 | ENSG00000188786 | MTF1 | 1 | 38275239 | 38325292 | -1 | protein_coding | 4520 | MTF1 | 0.9913947171 | -1.990277896 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
6 | ENSG00000230610 | AL929472.1 | 1 | 38292232 | 38293886 | -1 | protein_coding | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
7 | ENSG00000235673 | RP11-109P14.8 | 1 | 38306658 | 38307348 | 1 | pseudogene | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
8 | ENSG00000230955 | RP11-109P14.10 | 1 | 38326369 | 38327252 | 1 | antisense | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
9 | ENSG00000204084 | INPP5B | 1 | 38326369 | 38412729 | -1 | protein_coding | 3633 | INPP5B | 7.43E-09 | 0.019111125 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
10 | ENSG00000252448 | SNORA63 | 1 | 38349909 | 38349989 | 1 | snoRNA | 6043 | SNORA63 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
11 | ENSG00000222282 | RNU6-584P | 1 | 38350695 | 38350789 | 1 | snRNA | 106479825 | RNU6-584P | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | hESC | 3.46E-09 | rs682571 | 1 | ||
12 | ENSG00000185668 | POU3F1 | 1 | 38509523 | 38512450 | -1 | protein_coding | 5453 | POU3F1 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | GM12878 | 3.46E-09 | rs682571 | 1 | ||
13 | ENSG00000224592 | RP5-884C9.2 | 1 | 38512986 | 38584697 | 1 | lincRNA | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | GM12878 | 3.46E-09 | rs682571 | 1 | ||
14 | ENSG00000116954 | RRAGC | 1 | 39303870 | 39325495 | -1 | protein_coding | 64121 | RRAGC | 0.6000780523 | 0.001374789 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Liver:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
15 | ENSG00000228436 | RP5-864K19.4 | 1 | 39325672 | 39385068 | 1 | antisense | 105378663 | LOC105378663 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Liver:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
16 | ENSG00000214114 | MYCBP | 1 | 39328636 | 39347289 | -1 | protein_coding | 26292 | MYCBP | 0.7393284092 | 0.104919211 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Liver:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
17 | ENSG00000131233 | GJA9 | 1 | 39330175 | 39347289 | -1 | protein_coding | 81025 | GJA9 | 3.07E-06 | 0.301595819 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Liver:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
18 | ENSG00000174574 | AKIRIN1 | 1 | 39456895 | 39471731 | 1 | protein_coding | 79647 | AKIRIN1 | 0.6720158196 | -0.504508658 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
19 | ENSG00000168653 | NDUFS5 | 1 | 39491990 | 39500308 | 1 | protein_coding | 4725 | NDUFS5 | 0.09821733172 | -0.068682085 | 0 | 0 | 4 | 3.01E-08 | 0.0001335538031 | eQTLGen_cis_eQTLs | NA | Yes | Promoter_anchored_loops:Mesenchymal_Stem_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
20 | ENSG00000127603 | MACF1 | 1 | 39546988 | 39952849 | 1 | protein_coding | 23499 | MACF1 | 1 | -0.445430382 | 10 | 16.76 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
21 | ENSG00000206654 | RNU6-608P | 1 | 39586612 | 39586715 | -1 | snRNA | 106481373 | RNU6-608P | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Aorta:Left_Ventricle:Liver:Lung:Psoas:Spleen:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Neural_Progenitor_Cell:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
22 | ENSG00000222378 | RNA5SP44 | 1 | 39619836 | 39619968 | -1 | rRNA | 100873283 | RNA5SP44 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Aorta:Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
23 | ENSG00000270040 | RP11-416A14.1 | 1 | 39672184 | 39672629 | 1 | sense_intronic | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Aorta:Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
24 | ENSG00000226438 | RP11-420K8.1 | 1 | 39715510 | 39723321 | -1 | antisense | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adrenal:Aorta:Left_Ventricle:Liver:Psoas:Right_Ventricle:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
25 | ENSG00000217897 | HSPE1P8 | 1 | 39769966 | 39770570 | -1 | pseudogene | 100292290 | HSPE1P8 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Aorta:Left_Ventricle:Liver:Right_Ventricle:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Neural_Progenitor_Cell:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
26 | ENSG00000255103 | KIAA0754 | 1 | 39876151 | 39882154 | 1 | protein_coding | 643314 | KIAA0754 | 0.02103612695 | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Aorta:Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
27 | ENSG00000183682 | BMP8A | 1 | 39957318 | 39991607 | 1 | protein_coding | 353500 | BMP8A | 0.4569631193 | NA | 9 | 16.76 | 13 | 5.79E-09 | 1.14E-12 | eQTLGen_cis_eQTLs:GTEx/v8/Brain_Spinal_cord_cervical_c-1:GTEx/v8/Heart_Atrial_Appendage:GTEx/v7/Heart_Atrial_Appendage:GTEx/v7/Testis:GTEx/v6/Heart_Atrial_Appendage | NA | Yes | Aorta:Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
28 | ENSG00000237624 | OXCT2P1 | 1 | 39980628 | 39982162 | 1 | pseudogene | 192217 | OXCT2P1 | NA | NA | 0 | 0 | 9 | 1.40E-05 | 2.42E-23 | GTEx/v8/Cells_Cultured_fibroblasts | NA | No | NA | NA | rs682571 | 1 | ||
29 | ENSG00000182109 | RP11-69E11.4 | 1 | 39987952 | 40011859 | -1 | antisense | NA | NA | NA | NA | 0 | 0 | 13 | 7.94E-09 | 4.51E-05 | PsychENCODE_eQTLs:eQTLGen_cis_eQTLs | NA | Yes | Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
30 | ENSG00000243970 | PPIEL | 1 | 39997510 | 40024379 | -1 | pseudogene | 728448 | PPIEL | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
31 | ENSG00000090621 | PABPC4 | 1 | 40026488 | 40042462 | -1 | protein_coding | 8761 | PABPC4 | 0.9924930644 | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
32 | ENSG00000228060 | RP11-69E11.8 | 1 | 40030832 | 40038875 | 1 | antisense | 101929516 | LOC101929516 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
33 | ENSG00000201457 | SNORA55 | 1 | 40033046 | 40033180 | -1 | snoRNA | 677834 | SNORA55 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle:Liver:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 3.46E-09 | rs682571 | 1 | ||
34 | ENSG00000163909 | HEYL | 1 | 40089825 | 40105617 | -1 | protein_coding | 26508 | HEYL | 6.81E-07 | -0.34785424 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | GM12878:IMR90:Mesenchymal_Stem_Cell | 3.46E-09 | rs682571 | 1 | ||
35 | ENSG00000225903 | RP1-144F13.3 | 1 | 40099088 | 40099575 | 1 | antisense | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | GM12878:IMR90:Mesenchymal_Stem_Cell | 3.46E-09 | rs682571 | 1 | ||
36 | ENSG00000116981 | NT5C1A | 1 | 40124793 | 40137710 | -1 | protein_coding | 84618 | NT5C1A | 8.15E-05 | -0.103966484 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | GM12878:IMR90:Mesenchymal_Stem_Cell:Trophoblast-like_Cell | 3.46E-09 | rs682571 | 1 | ||
37 | ENSG00000116983 | HPCAL4 | 1 | 40144320 | 40157361 | -1 | protein_coding | 51440 | HPCAL4 | 0.0184227514 | 2.624824964 | 0 | 0 | 12 | 1.37E-21 | 0 | eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel | NA | Yes | GM12878:IMR90:Mesenchymal_Stem_Cell:Trophoblast-like_Cell | 3.46E-09 | rs682571 | 1 | ||
38 | ENSG00000084072 | PPIE | 1 | 40157854 | 40229586 | 1 | protein_coding | 10450 | PPIE | 0.9808098399 | -0.248899387 | 0 | 0 | 9 | 1.50E-07 | 0.0005068518866 | eQTLGen_cis_eQTLs | NA | Yes | GM12878:IMR90:Mesenchymal_Stem_Cell:Trophoblast-like_Cell | 3.46E-09 | rs682571 | 1 | ||
39 | ENSG00000198754 | OXCT2 | 1 | 40235195 | 40237020 | -1 | protein_coding | 64064 | OXCT2 | NA | NA | 0 | 0 | 12 | 2.61E-09 | 2.75E-22 | PsychENCODE_eQTLs:GTEx/v8/Adipose_Subcutaneous:GTEx/v8/Artery_Aorta:GTEx/v8/Artery_Tibial:GTEx/v8/Heart_Atrial_Appendage:GTEx/v8/Heart_Left_Ventricle:GTEx/v8/Cells_Cultured_fibroblasts:GTEx/v7/Artery_Tibial:GTEx/v7/Heart_Atrial_Appendage:GTEx/v7/Cells_Transformed_fibroblasts:GTEx/v6/Artery_Tibial:GTEx/v6/Cells_Transformed_fibroblasts | NA | Yes | Promoter_anchored_loops:Bladder:Left_Ventricle:Spleen:IMR90:hESC | 3.46E-09 | rs682571 | 1 | ||
40 | ENSG00000198815 | FOXJ3 | 1 | 42642210 | 42801548 | -1 | protein_coding | 22887 | FOXJ3 | 0.9775750091 | -1.12470823 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
41 | ENSG00000227527 | RP11-223A3.1 | 1 | 42801057 | 42804047 | -1 | sense_overlapping | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
42 | ENSG00000066185 | ZMYND12 | 1 | 42896000 | 42921938 | -1 | protein_coding | 84217 | ZMYND12 | 0.001059947351 | -0.88231689 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
43 | ENSG00000127125 | PPCS | 1 | 42921788 | 42939056 | 1 | protein_coding | 79717 | PPCS | 0.003536336419 | -0.233646949 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
44 | ENSG00000186409 | CCDC30 | 1 | 42929001 | 43120335 | 1 | protein_coding | 728621 | CCDC30 | 6.07E-12 | -0.374475524 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
45 | ENSG00000164008 | C1orf50 | 1 | 43232940 | 43263968 | 1 | protein_coding | 79078 | C1orf50 | 0.007015926463 | 0.028316302 | 0 | 0 | 4 | 1.49E-05 | 0.0460054 | GTEx/v8/Cells_EBV-transformed_lymphocytes | NA | No | NA | NA | rs4141741 | 2 | ||
46 | ENSG00000228452 | RP5-994D16.9 | 1 | 43241484 | 43242461 | -1 | antisense | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Mesendoderm:hESC | 2.14E-08 | rs4141741 | 2 | ||
47 | ENSG00000177868 | CCDC23 | 1 | 43272723 | 43282954 | -1 | protein_coding | 374969 | CCDC23 | 0.2131548877 | NA | 0 | 0 | 88 | 4.60E-10 | 0 | eQTLGen_cis_eQTLs | NA | Yes | Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
48 | ENSG00000164010 | ERMAP | 1 | 43282795 | 43310660 | 1 | protein_coding | 114625 | ERMAP | 5.81E-05 | 0.252683207 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
49 | ENSG00000228192 | RP11-342M1.3 | 1 | 43300352 | 43312093 | -1 | antisense | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
50 | ENSG00000164011 | ZNF691 | 1 | 43312280 | 43318148 | 1 | protein_coding | 51058 | ZNF691 | 0.4177586497 | -0.577744535 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
51 | ENSG00000233708 | RP11-342M1.7 | 1 | 43352268 | 43354438 | -1 | pseudogene | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell:Mesendoderm:hESC | 2.14E-08 | rs4141741 | 2 | ||
52 | ENSG00000237090 | RP11-342M1.6 | 1 | 43356765 | 43358101 | -1 | pseudogene | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell:Mesendoderm:hESC | 2.14E-08 | rs4141741 | 2 | ||
53 | ENSG00000225099 | ATP6V1E1P1 | 1 | 43368903 | 43369583 | 1 | pseudogene | 343515 | ATP6V1E1P1 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
54 | ENSG00000117394 | SLC2A1 | 1 | 43391052 | 43424530 | -1 | protein_coding | 6513 | SLC2A1 | 0.9398081302 | -0.53204533 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:IMR90 | 2.14E-08 | rs4141741 | 2 | ||
55 | ENSG00000227533 | SLC2A1-AS1 | 1 | 43424720 | 43449029 | 1 | lincRNA | 440584 | SLC2A1-AS1 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:IMR90 | 2.14E-08 | rs4141741 | 2 | ||
56 | ENSG00000186973 | FAM183A | 1 | 43610824 | 43622067 | 1 | protein_coding | 440585 | FAM183A | 0.02932673611 | -0.403679933 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell:Mesendoderm:hESC | 2.14E-08 | rs4141741 | 2 | ||
57 | ENSG00000117395 | EBNA1BP2 | 1 | 43629846 | 43736607 | -1 | protein_coding | 10969 | EBNA1BP2 | 2.38E-06 | NA | 0 | 0 | 3 | 2.79E-06 | 0.02045939295 | eQTLGen_trans_eQTLs | NA | Yes | Adult_Cortex:Spleen:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:hESC | 2.14E-08 | rs62064364;rs4141741 | 02:57 | ||
58 | ENSG00000243710 | WDR65 | 1 | 43637820 | 43720029 | 1 | protein_coding | 149465 | WDR65 | 8.58E-09 | 0.128913991 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:hESC | 2.14E-08 | rs4141741 | 2 | ||
59 | ENSG00000179178 | TMEM125 | 1 | 43735665 | 43739673 | 1 | protein_coding | 128218 | TMEM125 | 0.0004285561136 | 0.191656511 | 0 | 0 | 52 | 1.87E-06 | 8.60E-09 | PsychENCODE_eQTLs:CMC_SVA_cis:GTEx/v8/Thyroid | NA | Yes | Adult_Cortex:Spleen:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:hESC | 2.14E-08 | rs4141741 | 2 | ||
60 | ENSG00000253313 | C1orf210 | 1 | 43747554 | 43751288 | -1 | protein_coding | 149466 | C1orf210 | 0.001219635831 | 0.676593983 | 2 | 16.67 | 104 | 5.01E-07 | 0.0003951724875 | BIOSQTL/BIOS_eQTL_geneLevel:GTEx/v8/Testis:GTEx/v7/Testis | NA | Yes | Promoter_anchored_loops:Adult_Cortex:Spleen:GM12878:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:hESC | 2.14E-08 | rs4141741 | 2 | ||
61 | ENSG00000066056 | TIE1 | 1 | 43766664 | 43788779 | 1 | protein_coding | 7075 | TIE1 | 8.71E-12 | -0.019633805 | 30 | 16.67 | 112 | 6.33E-37 | 0 | PsychENCODE_eQTLs:eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:xQTLServer_eQTLs:CMC_SVA_cis:CMC_NoSVA_cis:GTEx/v8/Adipose_Subcutaneous:GTEx/v8/Adipose_Visceral_Omentum:GTEx/v8/Artery_Aorta:GTEx/v8/Artery_Tibial:GTEx/v8/Brain_Cortex:GTEx/v8/Brain_Hippocampus:GTEx/v8/Breast_Mammary_Tissue:GTEx/v8/Colon_Sigmoid:GTEx/v8/Colon_Transverse:GTEx/v8/Esophagus_Gastroesophageal_Junction:GTEx/v8/Esophagus_Mucosa:GTEx/v8/Esophagus_Muscularis:GTEx/v8/Heart_Atrial_Appendage:GTEx/v8/Heart_Left_Ventricle:GTEx/v8/Lung:GTEx/v8/Muscle_Skeletal:GTEx/v8/Nerve_Tibial:GTEx/v8/Pancreas:GTEx/v8/Prostate:GTEx/v8/Cells_Cultured_fibroblasts:GTEx/v8/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v8/Skin_Sun_Exposed_Lower_leg:GTEx/v8/Small_Intestine_Terminal_Ileum:GTEx/v8/Stomach:GTEx/v8/Thyroid:GTEx/v7/Adipose_Subcutaneous:GTEx/v7/Adipose_Visceral_Omentum:GTEx/v7/Artery_Tibial:GTEx/v7/Breast_Mammary_Tissue:GTEx/v7/Colon_Sigmoid:GTEx/v7/Esophagus_Gastroesophageal_Junction:GTEx/v7/Esophagus_Mucosa:GTEx/v7/Esophagus_Muscularis:GTEx/v7/Heart_Atrial_Appendage:GTEx/v7/Heart_Left_Ventricle:GTEx/v7/Lung:GTEx/v7/Muscle_Skeletal:GTEx/v7/Nerve_Tibial:GTEx/v7/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v7/Skin_Sun_Exposed_Lower_leg:GTEx/v7/Small_Intestine_Terminal_Ileum:GTEx/v7/Stomach:GTEx/v7/Thyroid:GTEx/v6/Adipose_Subcutaneous:GTEx/v6/Adipose_Visceral_Omentum:GTEx/v6/Breast_Mammary_Tissue:GTEx/v6/Colon_Sigmoid:GTEx/v6/Esophagus_Muscularis:GTEx/v6/Heart_Left_Ventricle:GTEx/v6/Muscle_Skeletal:GTEx/v6/Nerve_Tibial:GTEx/v6/Pancreas:GTEx/v6/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v6/Skin_Sun_Exposed_Lower_leg:GTEx/v6/Thyroid | NA | Yes | Promoter_anchored_loops:Adult_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
62 | ENSG00000117400 | MPL | 1 | 43803478 | 43818443 | 1 | protein_coding | 4352 | MPL | 1.44E-06 | -0.172843809 | 19 | 22.4 | 112 | 1.22E-46 | 0 | eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:GTEx/v8/Testis:GTEx/v7/Testis | NA | Yes | IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
63 | ENSG00000234694 | RP1-92O14.3 | 1 | 43820355 | 43824329 | -1 | antisense | NA | NA | NA | NA | 11 | 22.4 | 112 | 1.17E-39 | 0 | eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:GTEx/v8/Artery_Aorta:GTEx/v8/Colon_Transverse:GTEx/v8/Testis:GTEx/v7/Testis | NA | Yes | Promoter_anchored_loops:Adult_Cortex:Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
64 | ENSG00000117399 | CDC20 | 1 | 43824626 | 43828874 | 1 | protein_coding | 991 | CDC20 | 0.0001818538348 | -0.322700115 | 13 | 22.4 | 112 | 3.24E-09 | 6.44E-07 | PsychENCODE_eQTLs:eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:GTEx/v8/Esophagus_Mucosa:GTEx/v8/Muscle_Skeletal:GTEx/v8/Pituitary:GTEx/v8/Thyroid:GTEx/v7/Esophagus_Mucosa:GTEx/v7/Thyroid | NA | Yes | Promoter_anchored_loops:Adult_Cortex:Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
65 | ENSG00000066322 | ELOVL1 | 1 | 43829068 | 43833696 | -1 | protein_coding | 64834 | ELOVL1 | 0.2234145302 | NA | 17 | 22.4 | 110 | 1.60E-23 | 0 | PsychENCODE_eQTLs:eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:CMC_SVA_cis | NA | Yes | Promoter_anchored_loops:Adult_Cortex:Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
66 | ENSG00000159479 | MED8 | 1 | 43849588 | 43855479 | -1 | protein_coding | 112950 | MED8 | 8.16E-06 | 0.403723391 | 18 | 18.26 | 114 | 0 | 0 | PsychENCODE_eQTLs:DICE/T_CD4_naive:DICE/T_CD4_naive_activated:DICE/T_CD4_memory_TREG:eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:CMC_SVA_cis:GTEx/v8/Adipose_Subcutaneous:GTEx/v8/Whole_Blood:GTEx/v8/Artery_Aorta:GTEx/v8/Artery_Tibial:GTEx/v8/Brain_Caudate_basal_ganglia:GTEx/v8/Brain_Cerebellar_Hemisphere:GTEx/v8/Brain_Spinal_cord_cervical_c-1:GTEx/v8/Breast_Mammary_Tissue:GTEx/v8/Esophagus_Muscularis:GTEx/v8/Heart_Left_Ventricle:GTEx/v8/Lung:GTEx/v8/Muscle_Skeletal:GTEx/v8/Nerve_Tibial:GTEx/v8/Ovary:GTEx/v8/Pituitary:GTEx/v8/Prostate:GTEx/v8/Testis:GTEx/v8/Thyroid:GTEx/v7/Adipose_Subcutaneous:GTEx/v7/Artery_Aorta:GTEx/v7/Artery_Tibial:GTEx/v7/Brain_Spinal_cord_cervical_c-1:GTEx/v7/Esophagus_Muscularis:GTEx/v7/Heart_Left_Ventricle:GTEx/v7/Muscle_Skeletal:GTEx/v7/Nerve_Tibial:GTEx/v7/Testis:GTEx/v7/Thyroid:GTEx/v6/Adipose_Subcutaneous:GTEx/v6/Artery_Aorta:GTEx/v6/Esophagus_Muscularis:GTEx/v6/Muscle_Skeletal:GTEx/v6/Nerve_Tibial:GTEx/v6/Testis:GTEx/v6/Thyroid | NA | Yes | Adult_Cortex:Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
67 | ENSG00000229431 | RP1-92O14.6 | 1 | 43850784 | 43854826 | 1 | antisense | NA | NA | NA | NA | 18 | 18.26 | 113 | 1.40E-27 | 0 | eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:GTEx/v8/Esophagus_Mucosa:GTEx/v8/Esophagus_Muscularis:GTEx/v8/Cells_Cultured_fibroblasts:GTEx/v8/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v8/Skin_Sun_Exposed_Lower_leg:GTEx/v8/Stomach:GTEx/v7/Cells_Transformed_fibroblasts:GTEx/v7/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v7/Skin_Sun_Exposed_Lower_leg:GTEx/v6/Whole_Blood:GTEx/v6/Esophagus_Mucosa:GTEx/v6/Muscle_Skeletal:GTEx/v6/Cells_Transformed_fibroblasts:GTEx/v6/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v6/Skin_Sun_Exposed_Lower_leg | NA | Yes | Adult_Cortex:Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
68 | ENSG00000198198 | SZT2 | 1 | 43855553 | 43918321 | 1 | protein_coding | 23334 | SZT2 | 1.52E-07 | 0.623916217 | 56 | 18.87 | 111 | 1.04E-14 | 0 | BIOSQTL/BIOS_eQTL_geneLevel:GTEx/v8/Whole_Blood:GTEx/v8/Testis:GTEx/v7/Testis:GTEx/v6/Testis | NA | Yes | Adult_Cortex:Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
69 | ENSG00000229372 | SZT2-AS1 | 1 | 43913447 | 43914315 | -1 | antisense | 100873952 | SZT2-AS1 | NA | NA | 13 | 18.87 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
70 | ENSG00000178922 | HYI | 1 | 43916824 | 43919660 | -1 | protein_coding | 81888 | HYI | 3.16E-08 | -0.187049626 | 14 | 18.87 | 112 | 1.07E-21 | 0 | PsychENCODE_eQTLs:eQTLGen_cis_eQTLs:BIOSQTL/BIOS_eQTL_geneLevel:xQTLServer_eQTLs:CMC_SVA_cis:GTEx/v7/Adipose_Subcutaneous:GTEx/v7/Adipose_Visceral_Omentum:GTEx/v7/Adrenal_Gland:GTEx/v7/Artery_Tibial:GTEx/v7/Brain_Anterior_cingulate_cortex_BA24:GTEx/v7/Brain_Caudate_basal_ganglia:GTEx/v7/Brain_Cerebellar_Hemisphere:GTEx/v7/Breast_Mammary_Tissue:GTEx/v7/Colon_Sigmoid:GTEx/v7/Colon_Transverse:GTEx/v7/Esophagus_Gastroesophageal_Junction:GTEx/v7/Esophagus_Mucosa:GTEx/v7/Esophagus_Muscularis:GTEx/v7/Heart_Atrial_Appendage:GTEx/v7/Lung:GTEx/v7/Muscle_Skeletal:GTEx/v7/Nerve_Tibial:GTEx/v7/Pituitary:GTEx/v7/Cells_Transformed_fibroblasts:GTEx/v7/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v7/Skin_Sun_Exposed_Lower_leg:GTEx/v7/Stomach:GTEx/v7/Thyroid:GTEx/v6/Adipose_Subcutaneous:GTEx/v6/Adipose_Visceral_Omentum:GTEx/v6/Adrenal_Gland:GTEx/v6/Artery_Tibial:GTEx/v6/Esophagus_Mucosa:GTEx/v6/Heart_Atrial_Appendage:GTEx/v6/Lung:GTEx/v6/Nerve_Tibial:GTEx/v6/Pancreas:GTEx/v6/Cells_Transformed_fibroblasts:GTEx/v6/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v6/Stomach:GTEx/v6/Thyroid | NA | Yes | IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
71 | ENSG00000229348 | HYI-AS1 | 1 | 43919598 | 43922666 | 1 | antisense | 100873923 | HYI-AS1 | NA | NA | 14 | 18.87 | 105 | 1.04E-14 | 0 | BIOSQTL/BIOS_eQTL_geneLevel | NA | Yes | Adult_Cortex:Fetal_Cortex:IMR90:Mesenchymal_Stem_Cell:Mesendoderm:Trophoblast-like_Cell:hESC | 2.14E-08 | rs4141741 | 2 | ||
72 | ENSG00000142949 | PTPRF | 1 | 43990858 | 44089343 | 1 | protein_coding | 5792 | PTPRF | 0.999998379 | -1.116923282 | 0 | 0 | 74 | 1.82E-06 | 3.78E-07 | DICE/T_CD4_memory_TREG:GTEx/v8/Nerve_Tibial:GTEx/v8/Skin_Not_Sun_Exposed_Suprapubic:GTEx/v8/Skin_Sun_Exposed_Lower_leg | NA | Yes | Adult_Cortex:Fetal_Cortex | 2.14E-08 | rs4141741 | 2 | ||
73 | ENSG00000236200 | KDM4A-AS1 | 1 | 44165436 | 44173809 | -1 | antisense | 100132774 | KDM4A-AS1 | NA | NA | 0 | 0 | 49 | 1.71E-06 | 0.005052657211 | eQTLGen_cis_eQTLs | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
74 | ENSG00000126091 | ST3GAL3 | 1 | 44171495 | 44396831 | 1 | protein_coding | 6487 | ST3GAL3 | 0.5739894593 | 0.35827043 | 0 | 0 | 41 | 2.17E-06 | 0.006381686806 | eQTLGen_cis_eQTLs | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
75 | ENSG00000233674 | RP11-184I16.3 | 1 | 44209142 | 44209412 | 1 | pseudogene | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90 | 2.14E-08 | rs4141741 | 2 | ||
76 | ENSG00000237950 | RP11-7O11.3 | 1 | 44410042 | 44412223 | -1 | antisense | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
77 | ENSG00000117408 | IPO13 | 1 | 44412611 | 44433694 | 1 | protein_coding | 9670 | IPO13 | 0.9724443382 | -1.047462746 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
78 | ENSG00000132768 | DPH2 | 1 | 44435672 | 44439041 | 1 | protein_coding | 1802 | DPH2 | 0.006846747684 | 0.103530113 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Promoter_anchored_loops:IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
79 | ENSG00000117410 | ATP6V0B | 1 | 44440159 | 44443967 | 1 | protein_coding | 533 | ATP6V0B | 0.9276352314 | -0.400284464 | 0 | 0 | 1 | 7.78E-05 | 6.18E-09 | GTEx/v8/Adipose_Visceral_Omentum | NA | Yes | Promoter_anchored_loops:IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
80 | ENSG00000159214 | CCDC24 | 1 | 44457031 | 44462200 | 1 | protein_coding | 149473 | CCDC24 | 2.01E-08 | -0.436774622 | 0 | 0 | 2 | 3.73E-06 | 0.01076319759 | eQTLGen_cis_eQTLs | NA | No | NA | NA | rs4141741 | 2 | ||
81 | ENSG00000227163 | RP5-1198O20.5 | 1 | 44553630 | 44554149 | -1 | pseudogene | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | IMR90:Mesenchymal_Stem_Cell | 2.14E-08 | rs4141741 | 2 | ||
82 | ENSG00000126106 | TMEM53 | 1 | 45100910 | 45140227 | -1 | protein_coding | 79639 | TMEM53 | 0.03897516849 | 0.353320546 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Fetal_Cortex | NA | rs4141741 | 2 | ||
83 | ENSG00000198520 | C1orf228 | 1 | 45140364 | 45191263 | 1 | protein_coding | 339541 | C1orf228 | NA | -0.536446772 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Fetal_Cortex | NA | rs4141741 | 2 | ||
84 | ENSG00000200169 | RNU5D-1 | 1 | 45196727 | 45196842 | -1 | snRNA | 26830 | RNU5D-1 | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex:Fetal_Cortex | NA | rs4141741 | 2 | ||
85 | ENSG00000121310 | ECHDC2 | 1 | 53361656 | 53392884 | -1 | protein_coding | 55268 | ECHDC2 | 1.18E-07 | 0.19221948 | 0 | 0 | 18 | 5.31E-10 | 2.02E-05 | eQTLGen_trans_eQTLs | NA | No | NA | NA | rs62064364;rs34000805 | 57:59:00 | ||
86 | ENSG00000197568 | HHLA3 | 1 | 70820488 | 70851022 | 1 | protein_coding | 11147 | HHLA3 | 0.006180970143 | -0.290407734 | 0 | 0 | 3 | 3.50E-06 | 0.02467255799 | eQTLGen_trans_eQTLs | NA | No | NA | NA | rs62064364 | 57 | ||
87 | ENSG00000137959 | IFI44L | 1 | 79085607 | 79111830 | 1 | protein_coding | 10964 | IFI44L | 2.22E-10 | 0.480155556 | 0 | 0 | 1 | 7.85E-06 | 0.04777702703 | eQTLGen_trans_eQTLs | NA | No | NA | NA | rs62064364 | 57 | ||
88 | ENSG00000117519 | CNN3 | 1 | 95362507 | 95392834 | -1 | protein_coding | 1266 | CNN3 | 0.8643705128 | NA | 0 | 0 | 9 | 2.32E-07 | 0.002217008798 | eQTLGen_trans_eQTLs | NA | No | NA | NA | rs62064364 | 57 | ||
89 | ENSG00000143416 | SELENBP1 | 1 | 151336778 | 151345209 | -1 | protein_coding | 8991 | SELENBP1 | 1.22E-06 | -0.425587274 | 0 | 0 | 2 | 3.27E-08 | 0.0004211443509 | eQTLGen_trans_eQTLs | NA | No | NA | NA | rs115740542 | 22 | ||
90 | ENSG00000159377 | PSMB4 | 1 | 151372010 | 151374420 | 1 | protein_coding | 5692 | PSMB4 | 0.3988132847 | -0.145832206 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Left_Ventricle | NA | rs12133923 | 3 | ||
91 | ENSG00000159527 | PGLYRP3 | 1 | 153270338 | 153283194 | -1 | protein_coding | 114771 | PGLYRP3 | 9.00E-05 | 0.627415477 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Promoter_anchored_loops | NA | rs12133923 | 3 | ||
92 | ENSG00000163218 | PGLYRP4 | 1 | 153302596 | 153321316 | -1 | protein_coding | 57115 | PGLYRP4 | 2.63E-08 | 0.529329994 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Trophoblast-like_Cell | NA | rs12133923 | 3 | ||
93 | ENSG00000163220 | S100A9 | 1 | 153330330 | 153333503 | 1 | protein_coding | 6280 | S100A9 | 0.6674401176 | 0.10100566 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Trophoblast-like_Cell | NA | rs12133923 | 3 | ||
94 | ENSG00000163221 | S100A12 | 1 | 153346184 | 153348125 | -1 | protein_coding | 6283 | S100A12 | 0.03352974585 | -0.048060867 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Trophoblast-like_Cell | NA | rs12133923 | 3 | ||
95 | ENSG00000237008 | AL591704.5 | 1 | 153352297 | 153353275 | -1 | pseudogene | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Promoter_anchored_loops:Trophoblast-like_Cell | NA | rs12133923 | 3 | ||
96 | ENSG00000143546 | S100A8 | 1 | 153362508 | 153363664 | -1 | protein_coding | 6279 | S100A8 | 0.1862166053 | -0.286220998 | 0 | 0 | 1 | 0.000129041 | 0.00536042 | GTEx/v8/Skin_Sun_Exposed_Lower_leg | NA | No | NA | NA | rs12133923 | 3 | ||
97 | ENSG00000184330 | S100A7A | 1 | 153389000 | 153395701 | 1 | protein_coding | 338324 | S100A7A | 0.03159927677 | 0.979371556 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Promoter_anchored_loops | NA | rs12133923 | 3 | ||
98 | ENSG00000263841 | RN7SL44P | 1 | 153472943 | 153473240 | -1 | misc_RNA | 106480934 | RN7SL44P | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Adult_Cortex | NA | rs12133923 | 3 | ||
99 | ENSG00000238279 | BX470102.3 | 1 | 153506079 | 153507591 | 1 | antisense | NA | NA | NA | NA | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Promoter_anchored_loops | NA | rs12133923 | 3 | ||
100 | ENSG00000197956 | S100A6 | 1 | 153507075 | 153508720 | -1 | protein_coding | 6277 | S100A6 | 0.1789179663 | 0.53720034 | 0 | 0 | 0 | NA | NA | NA | NA | Yes | Promoter_anchored_loops | NA | rs12133923 | 3 |