A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Name | Aliases | Clonal | Where collected | Lab (W, P, RL) W - Weis P - Pringle RL - Rodriguez-Lanetty | Culture started | Sex | Symbiont type | Genotype info (SCAR markers) | Genome/Transcriptomic status | Comments | ||||||||||||
2 | CC7 | Yes | *****North Carolina coast. Florida?***** | W, P, RL | M | SSA01 | from Carolina Biological Supply | ||||||||||||||||
3 | DDA | No? | Tonga? | W | 1/19/2012 | ? | B1 | Live rock from Animal House, pet store in Corvallis, OR; rock in store "a while", putatively from Tonga | |||||||||||||||
4 | DD1 | Yes? | Tonga? | W | 9/20/2012 | ? | B1 | From tank in Emily's office; according to pet shop owner (Animal House, Corvallis, OR) rock was originally from Tonga; EW sequenced the mitochondrial genome from an anemone from this population | |||||||||||||||
5 | DDB | No? | Fiji? | W | 1/14/2012 | ? | B19/B2 | Live rock from All for Fish, fish store in Albany, OR; rock from Fiji | |||||||||||||||
6 | DD2 | Yes? | Fiji? | W | 9/26/2012 | B19/B2 | From tank in Dee's office; according to pet shop owner (All for Fish, Albany, OR) rock originally from Fiji | ||||||||||||||||
7 | DD3 | Yes? | Key Largo, FL | W | 12/1/2012 | B19/B2 | Collected by Dusty Kemp from dock piling, clone from DDC population | ||||||||||||||||
8 | EM1 | Yes | Eli's Cordley Reef tank | W | |||||||||||||||||||
9 | EM5 | Yes | Texas tank | W | B2? and probably B1 | ||||||||||||||||||
10 | GMC | No | W | 6/11/2012 | |||||||||||||||||||
11 | GME | No | Hawaii | W | 6/12/2012 | B1 | Originally collected in Coconut Island, Kaneohe Bay, Oahu in 1979 for Gisele's PhD research | ||||||||||||||||
12 | GMP | No | W | 6/13/2012 | |||||||||||||||||||
13 | GM6 | Yes | Bermuda | W | 9/26/2012 | from GMB population | |||||||||||||||||
14 | GM10 | Yes | Hawaii | W | 9/26/2012 | B1 | from GMD population which was originally collected in Coconut Island, Kaneohe Bay, Oahu in 1979 for Gisele's PhD research | ||||||||||||||||
15 | GM13 | Yes | W | 10/2/2012 | |||||||||||||||||||
16 | GM15 | Yes | Bermuda | W | B1 | from GMF population which was collected in Bermuda (Walsingham Pond) by Clay Cook in the mid-1980s. This clone was used by Drew Ferrier for his Ph.D. research and other labs. Kept in culture by GMP since 1988. | |||||||||||||||||
17 | GM16 | Yes | Bermuda (Walsingham Pond) | W | from GMP population which was collected in Bermuda (Walsingham Pond) by Clay Cook in the mid-1980s. This clone was used by Drew Ferrier for his Ph.D. research and other labs. Kept in culture by GMP since 1988. | ||||||||||||||||||
18 | H2 | Yes | Coconut Island, HI | W | F | B1 | |||||||||||||||||
19 | H2 | Yes | Coconut Island, HI | W | Spring 2018 | F | SSB01 | Apos were inoculated with SSB01 | |||||||||||||||
20 | H2 | Yes | Coconut Island, HI | W | Spring 2018 | F | Breviolum pseudominutum (ITS2 type B1) | Apos were inoculated with rt-013 culture (B. pseudominutum) | |||||||||||||||
21 | H2 | Yes | Coconut Island, HI | W | F | Breviolum psygmophilum (ITS2 type B2) | Apos were inoculated with HIAp culture (B. psygmophilum) | ||||||||||||||||
22 | Jack's CB | No | Florida? | W | from Carolina Biological Supply | ||||||||||||||||||
23 | JK | No | Wrightsville Beach, North Carolina | W | Breviolum psygmophilum (ITS2 type B2) | collected in north carolina by Jack Koch and shipped to OSU 7/29/2016 | |||||||||||||||||
24 | JKA2 | No | Wrightsville Beach, North Carolina | W | Breviolum psygmophilum (ITS2 type B2) | collected in north carolina by Jack Koch and shipped to OSU 7/29/2016 | |||||||||||||||||
25 | MMA | No | Whitney Laboratory for Marine Bioscience; St Augustine, FL | W | collected from the Whitney Lab "salt pond" next to station - off of a mangrove root | ||||||||||||||||||
26 | MMB | No | Whitney Laboratory for Marine Bioscience; St Augustine, FL | W | collected from the Whitney Lab "salt pond" next to station - off of a clay pot | ||||||||||||||||||
27 | MM1 | Yes | W | from MMB | |||||||||||||||||||
28 | MM2 | Yes | W | from MMB | |||||||||||||||||||
29 | VWA | No | Shark Tank, other sources | W | 2002 - 2003 | B1 | Collected from multiple sources, all clade B containing Aiptasia held in Virginia Weis wet lab. | ||||||||||||||||
30 | VWB | No | Hawaii | W | Spring 2012 | B1 | Collected off docks on Coconut Island in Kaneohe Bay | ||||||||||||||||
31 | VW2 | Yes | W | B1 | from VWA population | ||||||||||||||||||
32 | VW3 | Yes | W | B1 | from VWB population | ||||||||||||||||||
33 | VW8 | Yes | W | B1 | from VWB population | ||||||||||||||||||
34 | VW9 | Yes? | W | B1 | from VWB population; mixture of males and females, may not be clonal; | ||||||||||||||||||
35 | VWA12 | Yes | W | B1 | from VWA population | ||||||||||||||||||
36 | H2 | Yes | Hawai'i, Coconut Island | P | F | SSB01 | none | Our standard female line, forms far more pedal lacerates than CC7 | |||||||||||||||
37 | PLF3 | F003 | Yes | North Carolina coast. | P, RL | F | SSB01Delta136 | none | From Carolina Biological Supply. The main population of Symbiodinium seems to be a variation of SSB01 which has a 136 bp deletion in its cp23S sequence (bp 341-476 in respect to the 23S4F primer site) as well as one SNP A222T, remaining sequence is 100% identical. Might contain possible traces of other clades. | ||||||||||||||
38 | PLF5 | Yes | Supposed to be collected at North Carolina coast. | P | F | SSB01Delta136 | none | From Carolina Biological Supply. Supposed to be collected at North Carolina coast but SCAR markers place it close to H2. The main population of Symbiodinium seems to be a variation of SSB01 which has a 136 bp deletion in its cp23S sequence (bp 341-476 in respect to the 23S4F primer site) as well as one SNP A222T, remaining sequence is 100% identical. Might contain possible traces of other clades. | |||||||||||||||
39 | PLF8 | Yes | Supposed to be collected at North Carolina coast. | P | F | SSB01 | none | From Carolina Biological Supply. Supposed to be collected at North Carolina coast but SCAR markers place it close to H2. Mainly populated by SSB01, possible traces of other clades | |||||||||||||||
40 | |||||||||||||||||||||||
41 | |||||||||||||||||||||||
42 | |||||||||||||||||||||||
43 | |||||||||||||||||||||||
44 | |||||||||||||||||||||||
45 | |||||||||||||||||||||||
46 | |||||||||||||||||||||||
47 | |||||||||||||||||||||||
48 | |||||||||||||||||||||||
49 | |||||||||||||||||||||||
50 | |||||||||||||||||||||||
51 | |||||||||||||||||||||||
52 | |||||||||||||||||||||||
53 | |||||||||||||||||||||||
54 | |||||||||||||||||||||||
55 | |||||||||||||||||||||||
56 | |||||||||||||||||||||||
57 | |||||||||||||||||||||||
58 | |||||||||||||||||||||||
59 | |||||||||||||||||||||||
60 | |||||||||||||||||||||||
61 | |||||||||||||||||||||||
62 | |||||||||||||||||||||||
63 | |||||||||||||||||||||||
64 | |||||||||||||||||||||||
65 | |||||||||||||||||||||||
66 | |||||||||||||||||||||||
67 | |||||||||||||||||||||||
68 | |||||||||||||||||||||||
69 | |||||||||||||||||||||||
70 | |||||||||||||||||||||||
71 | |||||||||||||||||||||||
72 | |||||||||||||||||||||||
73 | |||||||||||||||||||||||
74 | |||||||||||||||||||||||
75 | |||||||||||||||||||||||
76 | |||||||||||||||||||||||
77 | |||||||||||||||||||||||
78 | |||||||||||||||||||||||
79 | |||||||||||||||||||||||
80 | |||||||||||||||||||||||
81 | |||||||||||||||||||||||
82 | |||||||||||||||||||||||
83 | |||||||||||||||||||||||
84 | |||||||||||||||||||||||
85 | |||||||||||||||||||||||
86 | |||||||||||||||||||||||
87 | |||||||||||||||||||||||
88 | |||||||||||||||||||||||
89 | |||||||||||||||||||||||
90 | |||||||||||||||||||||||
91 | |||||||||||||||||||||||
92 | |||||||||||||||||||||||
93 | |||||||||||||||||||||||
94 | |||||||||||||||||||||||
95 | |||||||||||||||||||||||
96 | |||||||||||||||||||||||
97 | |||||||||||||||||||||||
98 | |||||||||||||||||||||||
99 | |||||||||||||||||||||||
100 |