PD Mice sample metadata (QIIME 2 2019.10)
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ABCDEFGHIJKLMNOPQRSTUVWXYZ
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sample_namebarcodemouse_idgenotypecage_iddonor
donor_status
days_post_transplant
genotype_and_donor_status
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#q2:types
categorical
categorical
categorical
categorical
categoricalnumericcategorical
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recip.220.WT.OB1.D7CCTCCGTCATGG457wild typeC35hc_1Healthy49
wild type and Healthy
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recip.290.ASO.OB2.D1AACAGTAAACAA456
susceptible
C35hc_1Healthy49
susceptible and Healthy
5
recip.389.WT.HC2.D21ATGTATCAATTA435
susceptible
C31hc_1Healthy21
susceptible and Healthy
6
recip.391.ASO.PD2.D14
GTCAGTATGGCT435
susceptible
C31hc_1Healthy14
susceptible and Healthy
7
recip.391.ASO.PD2.D21
AGACAGTAGGAG437
susceptible
C31hc_1Healthy21
susceptible and Healthy
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recip.391.ASO.PD2.D7GGTCTTAGCACC435
susceptible
C31hc_1Healthy7
susceptible and Healthy
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recip.400.ASO.HC2.D14
CGTTCGCTAGCC437
susceptible
C31hc_1Healthy14
susceptible and Healthy
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recip.401.ASO.HC2.D7ATTTACAATTGA437
susceptible
C31hc_1Healthy7
susceptible and Healthy
11
recip.403.ASO.PD2.D21
CGCAGATTAGTA456
susceptible
C35hc_1Healthy21
susceptible and Healthy
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recip.411.ASO.HC2.D14
ATGTTAGGGAAT456
susceptible
C35hc_1Healthy14
susceptible and Healthy
13
recip.411.ASO.HC2.D21
CTCATATGCTAT457wild typeC35hc_1Healthy21
wild type and Healthy
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recip.411.ASO.HC2.D49
GCAACGAACGAG435
susceptible
C31hc_1Healthy49
susceptible and Healthy
15
recip.412.ASO.HC2.D14
AAGTGGCTATCC457wild typeC35hc_1Healthy14
wild type and Healthy
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recip.412.ASO.HC2.D7GCATTCGGCGTT456
susceptible
C35hc_1Healthy7
susceptible and Healthy
17
recip.413.WT.HC2.D7ACCAGTGACTCA457wild typeC35hc_1Healthy7
wild type and Healthy
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recip.456.ASO.HC3.D49
ACGGCGTTATGT468wild typeC42hc_1Healthy49
wild type and Healthy
19
recip.458.ASO.HC3.D21
ACGGCCCTGGAG468wild typeC42hc_1Healthy21
wild type and Healthy
20
recip.458.ASO.HC3.D49
CATTTGACGACG469wild typeC42hc_1Healthy49
wild type and Healthy
21
recip.459.WT.HC3.D14ACATGGGCGGAA468wild typeC42hc_1Healthy14
wild type and Healthy
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recip.459.WT.HC3.D21CATAAATTCTTG469wild typeC42hc_1Healthy21
wild type and Healthy
23
recip.459.WT.HC3.D49GCTGCGTATACC536
susceptible
C43pd_1PD49
susceptible and PD
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recip.460.WT.HC3.D14CTGCGGATATAC469wild typeC42hc_1Healthy14
wild type and Healthy
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recip.460.WT.HC3.D21GTCAATTAGTGG536
susceptible
C43pd_1PD21
susceptible and PD
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recip.460.WT.HC3.D49GAGAAGCTTATA537wild typeC43pd_1PD49
wild type and PD
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recip.460.WT.HC3.D7GACCCGTTTCGC468wild typeC42hc_1Healthy7
wild type and Healthy
28
recip.461.ASO.HC3.D21
AGCCCGCAAAGG537wild typeC43pd_1PD21
wild type and PD
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recip.461.ASO.HC3.D49
GGCGTAACGGCA538wild typeC44pd_1PD49
wild type and PD
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recip.461.ASO.HC3.D7ATTGCCTTGATT469wild typeC42hc_1Healthy7
wild type and Healthy
31
recip.462.WT.PD3.D14GTGAGGGCAAGT536
susceptible
C43pd_1PD14
susceptible and PD
32
recip.462.WT.PD3.D21GGCCTATAAGTC538wild typeC44pd_1PD21
wild type and PD
33
recip.462.WT.PD3.D49AATACAGACCTG539
susceptible
C44pd_1PD49
susceptible and PD
34
recip.462.WT.PD3.D7TTAGGATTCTAT536
susceptible
C43pd_1PD7
susceptible and PD
35
recip.463.WT.PD3.D14ATATTGGCAGCC537wild typeC43pd_1PD14
wild type and PD
36
recip.463.WT.PD3.D21CGCGGCGCAGCT539
susceptible
C44pd_1PD21
susceptible and PD
37
recip.463.WT.PD3.D7GTTTATCTTAAG537wild typeC43pd_1PD7
wild type and PD
38
recip.464.WT.PD3.D14TCATCCGTCGGC538wild typeC44pd_1PD14
wild type and PD
39
recip.465.ASO.PD3.D14
GGCTTCGGAGCG539
susceptible
C44pd_1PD14
susceptible and PD
40
recip.465.ASO.PD3.D7CAGTCTAGTACG538wild typeC44pd_1PD7
wild type and PD
41
recip.466.ASO.PD3.D7GTGGGACTGCGC539
susceptible
C44pd_1PD7
susceptible and PD
42
recip.467.WT.HC3.D49.a
GTCAGGTGCGGC437
susceptible
C31hc_1Healthy49
susceptible and Healthy
43
recip.467.WT.HC3.D49.b
GTTAACTTACTA546
susceptible
C49pd_1PD49
susceptible and PD
44
recip.536.ASO.PD4.D49
CAAATTCGGGAT547wild typeC49pd_1PD49
wild type and PD
45
recip.537.WT.PD4.D21CTCTATTCCACC546
susceptible
C49pd_1PD21
susceptible and PD
46
recip.538.WT.PD4.D21ATGGATAGCTAA547wild typeC49pd_1PD21
wild type and PD
47
recip.539.ASO.PD4.D14
GATCCGGCAGGA546
susceptible
C49pd_1PD14
susceptible and PD
48
recip.539.ASO.PD4.D7GTTCGAGTGAAT546
susceptible
C49pd_1PD7
susceptible and PD
49
recip.540.ASO.HC4.D14
CTTCCAACTCAT547wild typeC49pd_1PD14
wild type and PD
50
recip.540.ASO.HC4.D7CGGCCTAAGTTC547wild typeC49pd_1PD7
wild type and PD
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