DDBJ BioSample validation rules

	A	B	C	D	E	F	G	H
1	rule_class	rule_id	level	name	message	description	description_ja	Version:1.1.0

2	BioSample	BS_R0001	warning	Invalid missing value	Invalid missing value. Please provide missing value as either 'not collected', 'not applicable', 'missing' or in format "missing: reporting level term" (e.g. "missing: control sample") for mandatory attribute to declare both the absence of a true value as well as the reason (when possible).	The International Nucleotide Database Collaboration (INSDC) have developed a <a href="/biosample/submission-e.html#missing-value-reporting">standardised missing/null value reporting language</a> to be used where a value of an expected format for sample information reporting can not be provided. Please provide missing value as either 'not collected', 'not applicable', 'missing' or in format "missing: reporting level term" (e.g. "missing: control sample") for mandatory attribute to declare both the absence of a true value as well as the reason (when possible). Note that the reporting level term is required for "collection_date" and "geo_loc_name".	International Nucleotide Database Collaboration (INSDC) では<a href="https://www.ddbj.nig.ac.jp/biosample/submission.html#missing-value-reporting">値がない場合の記載方法を標準化</a>しています。必須属性の値がない場合は not collected/not applicable/missing、もしくは、理由を付けた所定書式 "missing: reporting level term" (例 "missing: control sample") で値がないこととその理由を記載してください。"collection_date" と "geo_loc_name" では理由が必須になります。
3	BioSample	BS_R0002	error	Invalid Attribute value for controlled terms	Attribute value is not in controlled terms.	Values are controlled in several attributes. <a href="https://docs.google.com/spreadsheets/d/1kh9vRllab7t7PBftd0nEBi-YbIWvFVRAiYS6F6RRBNU/edit#gid=1287828562">Controlled terms table</a>	いくつかの属性では入力できる値が制限されています。<a href="https://docs.google.com/spreadsheets/d/1kh9vRllab7t7PBftd0nEBi-YbIWvFVRAiYS6F6RRBNU/edit#gid=1287828562">Controlled terms table</a>
4	BioSample	BS_R0003	error	Duplicated sample title in this submission	Sample title is duplicated in the submission.	To distinguish sample, label each sample with a title unique within the submission.	サンプルを区別するため Submission 単位でユニークな title を付けてください。
5	BioSample	BS_R0004	error	Taxonomy name and id not match	Organism and taxonomy id do not match.	Enter a pair of organism and taxonomy id registered in <a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a>. For a novel organism, enter a proposed name in the organism and leave the taxonomy_id empty. Please also refer to the <a href="/ddbj/organism-e.html">Organism qualifier</a> page.	<a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a> に登録されている organism と taxonomy id の組を入力します。未登録の新規生物名の場合、提案する生物名を organism に記入し taxonomy_id は空にします。生物名については<a href="/ddbj/organism.html">「Organism qualifier に記載する生物名」</a>もご参考ください。
6	BioSample	BS_R0005	error	Invalid BioProject accession	Invalid BioProject accession. Please provide a valid BioProject accession with format PRJ[D\|E\|N]xxxxxx or PSUBxxxxxx
7	BioSample	BS_R0006	warning	BioProject not found	BioProject accession is not registered in your account. Please provide a valid BioProject accession.
8	BioSample	BS_R0007	error	Invalid datetime	Invalid datetime. Datetimes must be in Coordinated Universal Time (UTC) and follow ISO 8601 standard formats "YYYY-mm-dd", "YYYY-mm" or "YYYY-mm-ddThh:mm:ssZ".	Date format must follow ISO 8601 standard "YYYY-mm-dd", "YYYY-mm" or "YYYY-mm-ddThh:mm:ssZ" (e.g., 1990-10-30, 1990-10 or 1990-10-30T14:41:36Z). Collection times must be in Coordinated Universal Time (UTC). Times without time zone are processed as UTC. Non-UTC times are converted to UTC.<br> When you do not report the date, enter missing values in format "missing: reporting level term" (e.g. "missing: control sample") to declare both the absence of a true value as well as the reason.	日付と時間は ISO 8601 標準の "YYYY-mm-dd"、"YYYY-mm" もしくは "YYYY-mm-ddThh:mm:ssZ" (例 1990-10-30、1990-10 もしくは 1990-10-30T14:41:36Z) に準拠して記載します。時間は Coordinated Universal Time (UTC) で記述します。タイムゾーン指定が無い時間は UTC に変換されます。また、UTC 以外の時間は UTC 時間に変換されます。<br> 日付を報告しない場合、理由を付けた所定書式 "missing: reporting level term" (例 "missing: control sample") で値がないこととその理由を記載してください。詳細は「<a href="/biosample/submission.html#missing-value-reporting">値がない場合の記載方法</a>」を参照してください。
9	BioSample	BS_R0008	error	Invalid country	Entered country is not in controlled terms. When you do not report the location, enter missing values in format "missing: reporting level term" (e.g. "missing: control sample") to declare both the absence of a true value as well as the reason.	Country name must be in <a href="/ddbj/country-e.html">the country list</a>.<br> When you do not report the location, enter missing values in format "missing: reporting level term" (e.g. "missing: control sample") to declare both the absence of a true value as well as the reason.	country として使用できる国名は<a href="/ddbj/country-e.html">国名リスト</a>に制限されています。<br> 場所を報告しない場合、理由を付けた所定書式 "missing: reporting level term" (例 "missing: control sample") で値がないこととその理由を記載してください。詳細は「<a href="/biosample/submission.html#missing-value-reporting">値がない場合の記載方法</a>」を参照してください。
10	BioSample	BS_R0009	error	Invalid lat_lon format	Invalid lat_lon format. Specify as degrees latitude and longitude in format "d[d.dddddddd] N\|S d[dd.dddddddd] W\|E".	Latitude and longitude in <a href="/biosample/attribute-e.html?all=all#lat_lon">lat_lon</a> must be in "d[d.dddddddd] N\|S d[dd.dddddddd] W\|E" format.	<a href="/biosample/attribute.html?all=all#lat_lon">lat_lon</a> は規定書式 "d[d.dddddddd] N\|S d[dd.dddddddd] W\|E" で記載します。
11	BioSample	BS_R0011	warning	Invalid publication identifier	Invalid publication identifier, enter pubmed id, DOI or URL.
12	BioSample	BS_R0012	warning	Special character included	Special character is included.
13	BioSample	BS_R0013	warning	Invalid data format	Invalid data format.
14	BioSample	BS_R0015	warning	Invalid host organism name	Invalid host organism name.	Describe <a href="/biosample/attribute-e.html?all=all#host">host</a> with the scientific name in <a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a>.	<a href="/biosample/attribute.html?all=all#host">host</a> には <a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a> に登録されている生物名（scientific name）を記載します。
15	BioSample	BS_R0018	error	Missing sample name	Sample name is missing.
16	BioSample	BS_R0020	error	Missing organism	Organism is missing.
17	BioSample	BS_R0024	warning	Identical Attributes	You should have one BioSample for each specimen, and each of your BioSamples must have differentiating information (excluding sample name, title, bioproject accession and description). This check was implemented to encourage submitters to include distinguishing information in their samples. If the distinguishing information is in the sample name, title or description, please recode it into an appropriate attribute, either one of the predefined attributes or a custom attribute you define. If it is necessary to represent true biological replicates as separate BioSamples, you might add an 'aliquot' or 'replicate' attribute, e.g., 'replicate = biological replicate 1', as appropriate. Note that multiple assay types, e.g., RNA-seq and ChIP-seq data may reference the same BioSample if appropriate.	To distinguish samples in structural way, please differentiate samples with distinct attributes other than sample name, title, bioproject_id and description.	サンプルを属性値で構造化して区別するため、sample name、title、bioproject_id と description 以外の属性値でサンプルをできるだけ区別してください。
18	BioSample	BS_R0025	error	Missing Package information	Package information is missing.
19	BioSample	BS_R0026	error	Unknown Package	Sample refers to unknown Package.
20	BioSample	BS_R0027	error	Missing mandatory attribute	Sample has missing mandatory attribute(s). If you do not have information for the required field(s), please provide missing value as either 'not collected', 'not applicable', 'missing' or in format "missing: reporting level term" (e.g. "missing: control sample") for mandatory attribute to declare both the absence of a true value as well as the reason (when possible). Note that the reporting level term is required for "collection_date" and "geo_loc_name".	Please provide missing value as either 'not collected', 'not applicable', 'missing' or in format "missing: reporting level term" (e.g. "missing: control sample") for mandatory attribute to declare both the absence of a true value as well as the reason (when possible). Note that the reporting level term is required for "collection_date" and "geo_loc_name". See '<a href="/biosample/submission-e.html#missing-value-reporting">Missing value reporting</a>' for details.	必須属性の値がない場合は not collected/not applicable/missing、もしくは、理由を付けた所定書式 "missing: reporting level term" (例 "missing: control sample") で値がないこととその理由を記載してください。"collection_date" と "geo_loc_name" では理由が必須になります。詳細は「<a href="/biosample/submission.html#missing-value-reporting">値がない場合の記載方法</a>」を参照してください。
21	BioSample	BS_R0028	error	Duplicate Sample Names	The following Sample names were used in submission more than one time. Please provide unique Sample names.	Enter sample name unique within the submission.	Submission 単位でユニークな sample_name を付けてください。
22	BioSample	BS_R0029	warning	New line included	New line included: value possibly contains new line(s).
23	BioSample	BS_R0030	error	Non-ASCII header line	Unable to parse file: the header line contains non-ASCII characters. Please check that uploaded file is in text format, not Excel.
24	BioSample	BS_R0034	error	Missing Attribute name	Attribute name is missing.
25	BioSample	BS_R0036	error	Missing group of at least one required Attributes	Sample has missing attribute(s), at least one of the following attributes is required. If you do not have information for the required field(s), please provide missing value as either 'not collected', 'not applicable', 'missing' or in format "missing: reporting level term" (e.g. "missing: control sample") for mandatory attribute to declare both the absence of a true value as well as the reason (when possible).
26	BioSample	BS_R0037	error	Empty column name	Unable to parse batch file: the header line has empty column name.
27	BioSample	BS_R0038	error	Non-UTF8 input	Unable to parse batch file: some values cannot be converted to UTF8 encoding.
28	BioSample	BS_R0039	warning	Invalid Attribute value with autofix	These attribute values are not valid. An automatically-generated correction will be applied.
29	BioSample	BS_R0040	error	Future collection date	Sample collection date is a future date, please specify a date from the past.
30	BioSample	BS_R0041	warning	Latlon versus country	Values provided for 'latitude and longitude' and 'geographic location' contradict each other.	Country reverse geocoded from latitude and longitude by <a href="https://developers.google.com/maps/documentation/javascript/examples/geocoding-reverse?hl=ja">Google Maps Geocoding API</a> and that in the geo_loc_name are not same. Geocoding sometimes does not work for areas such as international waters.	緯度経度から <a href="https://developers.google.com/maps/documentation/javascript/examples/geocoding-reverse?hl=ja">Google Maps Geocoding API</a> で返された国名と geo_loc_name 中の国名との一致をチェックしています。緯度経度が公海等の国に属していない場所である場合、チェックがうまくいかないことがあります。
31	BioSample	BS_R0045	warning	Taxonomy error warning	If applicable, the taxonomy id will be automatically filled and the organism will be corrected to the scientific name. When the organism(s) is novel, please enter proposed name(s) in the organism, leave the taxonomy id empty and submit the BioSample.	For a novel organism which is not registered in <a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a>, enter a proposed organism name in the organism field and leave the taxonomy_id empty.	<a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a> に未登録の生物名の場合 organism に提唱する生物名を記入し taxonomy id は空にします。その場合このワーニングが表示されますがそのまま submit してください。
32	BioSample	BS_R0048	error	Package versus Organism	Organism is inappropriate for package. Please either specify a different sample type package or edit the organism according to the 'Appropriate organism and package' rules described at	Provide an organism name which is appropriate for the selected <a href="/biosample/overview-e.html#package">Sample package</a>	<a href="/biosample/overview.html#package">Sample package</a> に適した生物名を記載します。
33	BioSample	BS_R0058	error	Non-ASCII Attribute value	Non-ASCII format characters detected. Please check for non-standard characters in your attribute values around [### Non-ASCII character ###] and reformat as ASCII-only so that data can be properly consumed by dependent databases.
34	BioSample	BS_R0059	warning	Sex for bacteria	Attribute 'sex' is not appropriate.
35	BioSample	BS_R0061	error	Multiple Attribute values	Multiple values detected. Only one value is allowed. First value was used for subsequent validation.
36	BioSample	BS_R0062	warning	Multiple vouchers	Multiple voucher attributes (specimen voucher, culture collection or biologic material) detected with the same institution code. Only one value is allowed.
37	BioSample	BS_R0069	warning	Warning about BioProject increment	Consecutive BioProjects are referenced in this submission. This is often a mistake caused by incrementing autofill in Excel, please check your file.		bioproject_id に連続した値が記入されています。エクセルの連続値入力にご注意ください。
38	BioSample	BS_R0070	error	Invalid BioProject type	BioProject is an Umbrella project, not a primary data type of BioProject. Please provide the accession of the correct primary data BioProject or create a new BioProject, if necessary.
39	BioSample	BS_R0073	warning	Redundant taxonomy attributes	Redundant values are detected in at least two of the following fields: organism; host; isolation source. For example, the value you supply for 'host' should not be identical to the value supplied for 'isolation source'. This check is case-insensitive and ignores white-space.
40	BioSample	BS_R0074	error	package_vs_organism > Pathogen: clinical or host-associated	Must have lineage Bacteria, Viruses or Fungi
41	BioSample	BS_R0075	error	package_vs_organism > Pathogen: environmental/food/other	Must have lineage Bacteria, Viruses or Fungi
42	BioSample	BS_R0076	error	package_vs_organism > Microbe	Must have lineage Bacteria, Archaea, Viruses, Viroids or Fungi; or for unicellular eukaryotes, must not have lineage Metazoa, Embryophyta, unclassified sequences or other sequences
43	BioSample	BS_R0077	error	package_vs_organism > Model organism or animal	Must NOT be Homo sapiens or have lineage Bacteria, Archaea, Viruses, Fungi, Viroids, unclassified sequences or other sequence
44	BioSample	BS_R0078	error	package_vs_organism > Metagenome or environmental	Must be a metagenome, where lineage starts with unclassified sequences and scientific name ends with 'metagenome'
45	BioSample	BS_R0080	error	package_vs_organism > Human	Must be Homo sapiens
46	BioSample	BS_R0081	error	package_vs_organism > Plant	Must have lineage Viridiplantae, or be known to have plastids
47	BioSample	BS_R0083	error	package_vs_organism > MIMS Environmental/Metagenome	Must be a metagenome, where lineage starts with unclassified sequences and scientific name ends with 'metagenome'	Enter an organism name in <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=408169&lvl=3&lin=f&keep=1&srchmode=1&unlock">metagenomes</a> which ends with metagenome.	<a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=408169&lvl=3&lin=f&keep=1&srchmode=1&unlock">metagenomes</a> 中の metagenome で終わる生物名を入力します。
48	BioSample	BS_R0084	error	package_vs_organism > MIGS Cultured Bacterial/Archaeal	Must have lineage Bacteria or Archaea	Enter a species-level organism name in <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2">Bacteria</a> or <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2157">Archaea</a> lineages.	<a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2">Bacteria</a> もしくは <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2157">Archaea</a> lineage の種レベルの生物名を入力します。
49	BioSample	BS_R0085	error	package_vs_organism > MIGS Eukaryotic	Must have lineage Eukaryota	Enter a species-level oragnism name in <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2759">Eukaryota</a> lineage.	<a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2759">Eukaryota</a> lineage の種レベルの生物名を入力します。
50	BioSample	BS_R0086	error	package_vs_organism > MIGS Viral	Must have lineage Viruses	Enter a virus name in <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=10239">Viruses</a> lineage.	<a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=10239">Viruses</a> lineage の生物名を入力します。
51	BioSample	BS_R0088	error	package_vs_organism > MIMARKS Survey related	Must be a metagenome, where lineage starts with unclassified sequences and scientific name ends with 'metagenome'	Enter an organism name in <a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=408169&lvl=3&lin=f&keep=1&srchmode=1&unlock">metagenomes</a> which ends with metagenome.	<a href="https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=408169&lvl=3&lin=f&keep=1&srchmode=1&unlock">metagenomes</a> 中の metagenome で終わる生物名を入力します。
52	BioSample	BS_R0090	warning	Invalid Attribute value format	Attribute value format is invalid
53	BioSample	BS_R0091	error	Duplicated locus tag prefix	Locus tag prefix is duplicated.
54	BioSample	BS_R0092	error	Missing required attribute name	Required field is missing from the header line of the file.
55	BioSample	BS_R0093	error	Attribute value is not integer	Attribute value must be integer.
56	BioSample	BS_R0094	warning	Format of geo_loc_name is invalid	Format of geo_loc_name is invalid.	Describe <a href="/biosample/attribute-e.html?all=all#geo_loc_name">geo_loc_name</a> in the specified format.	<a href="/biosample/attribute.html?all=all#geo_loc_name">所定の書式で geo_loc_name</a> を記入します。
57	BioSample	BS_R0095	warning	BioProject submission id replacement	BioProject submission id (PSUBxxxxxx) is replaced to the PRJD accession number if available.
58	BioSample	BS_R0096	error	Taxonomy at species or infraspecific rank	Taxonomy should be species or infraspecific level.	Taxonomy should be species or infraspecific level in <a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a>.	organism には <a href="https://www.ncbi.nlm.nih.gov/taxonomy">NCBI Taxonomy</a> に登録されている種レベル以下の生物名を記載します。
59	BioSample	BS_R0097	error	Not well-formed XML	XML document is not well-formed.
60	BioSample	BS_R0098	error	Invalid XML against schema	XML document is invalid against the schema.
61	BioSample	BS_R0099	error	Invalid locus tag prefix format	Locus tag prefix must be 3-12 alphanumeric characters and the first character may not be a digit.	The <a href="/ddbj/locus_tag-e.html">locus_tag prefix</a> can contain only alpha-numeric characters and it must be between 3 and 12 characters long inclusive. It should start with a letter, but numerals can be in the 2nd position or later in the string. (ex. A1C). There should be no symbols, such as -_* in the prefix.	<a href="/ddbj/locus_tag.html">locus_tag_prefix</a> には英数字のみを使用し、3文字以上12文字以内でなければなりません。最初の1文字目は英字で始めますが、2文字目以降は数字でも構いません (例: A1C)。prefix には "-" "_" "*" といったシンボル記号は使用しないでください。
62	BioSample	BS_R0100	warning	Missing values provided for optional attributes	Missing values are not neccesary for optional attributes. Leave values empty when there is no information.		任意属性の値が無い場合は "missing: reporting level term" を記載せず空のままにします。
63	BioSample	BS_R0101	error	Invalid Sample Name format.	Maximum length of Sample Name is 100 characters (alphanumeric characters, spaces and (){}[]+-_.)		sample_name は最大100文字で英数字、半角空白と (){}[]+-_. から構成されている必要があります。
64	BioSample	BS_R0102	error	Duplicated locus tag prefix	Locus tag prefix is duplicated in the submission.	Enter unique <a href="/ddbj/locus_tag-e.html">locus_tag_prefix</a>.	<a href="/ddbj/locus_tag.html">locus_tag_prefix</a> が submission 内で重複しています。
65	BioSample	BS_R0103	error	Taken locus tag prefix	Locus tag prefix is already taken.	The <a href="/ddbj/locus_tag-e.html">locus_tag_prefix</a> is already reserved or used. Enter another one.	入力された <a href="/ddbj/locus_tag.html">locus_tag_prefix</a> は既に予約・使用されています。別の名前を入力してください。
66	BioSample	BS_R0104	error	Invalid taxonomy for genome sample	For a genome assembly derived from an unidentified/unpublished organism, a species-level informal name in form of "Genus sp. strain" should be used.	For a genome assembly sequence derived from an unidentified/unpublished microorganism and eukaryote (except fungi), a species-level tentative name made up with a genus name and a lower taxon (in most cases, a strain name) should be used. See <a href="/ddbj/organism-e.html#unidentified">Organism qualifier</a> for more details.	未同定・未確定の微生物や真核生物（真菌を除く）のゲノム配列を登録する場合、生物名には属名と下位のタクソン（多くの場合 strain 名）を組み合わせた一時的な種レベルの名前を記載します。詳細は<a href="/ddbj/organism.html#unidentified">Organism qualifier に記載する生物名</a>を参照してください。
67	BioSample	BS_R0105	warning	Taxonomy warning	An organism name in the taxonomy database should be used. If applicable, the organism will be corrected to the scientific name. When the organism is novel, please enter a proposed name in the component_organism.
68	BioSample	BS_R0106	error	Invalid metagenome source	A metagenomic organism name in the taxonomy database should be used. For example, 'soil metagenome'.
69	BioSample	BS_R0107	warning	Invalid institution code	An institution code with an appropriate type ('c' for culture collection and 's' for specimen voucher) in the NCBI BioCollections database should be used.	An institution code with an appropriate type ('c' for culture_collection, 's' for specimen_voucher and 'b' for bio_material) should be used. For the institution code, please see <a href="https://www.ncbi.nlm.nih.gov/biocollections/">the NCBI BioCollections database</a> or <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">the BioCollections list file</a>.	適切なタイプを持つ institution code (culture_collection は 'c'、specimen_voucher は 's'、bio_material は 'b') を使います。institution code については <a href="https://www.ncbi.nlm.nih.gov/biocollections/">NCBI BioCollections</a> もしくは <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">BioCollections list file</a> を参照してください。
70	BioSample	BS_R0113	error	Invalid culture_collection format	Valid culture collection format is "<institution-code>:[<collection-code>:]<culture_id>"	The institution_code and the identifier for the culture from which the nucleic acid sequence was obtained, with optional collection code. Value format is '<institution_code>:[<collection_code>:]<culture_id>'. Please see <a href="/ddbj/qualifiers-e.html#culture_collection">culture_collection qualifier</a> for details.	配列の得られた培養細胞の保管施設と ID を <institution-code>:[<collection-code>:]<culture_id> の書式で記載します。institution-code と culture_id が必須です。詳細は <a href="/ddbj/qualifiers.html#culture_collection">culture_collection qualifier</a> を参照してください。
71	BioSample	BS_R0114	error	Invalid culture_collection	The institution-code and/or collection-code must be registered in the NCBI BioCollections.	For valid institution and collection codes, please see <a href="https://www.ncbi.nlm.nih.gov/biocollections/">the NCBI BioCollections database</a> or <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">the BioCollections list file</a>.	有効な institution と collection code については、<a href="https://www.ncbi.nlm.nih.gov/biocollections/">NCBI BioCollections</a> もしくは <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">BioCollections list file</a> を参照してください。
72	BioSample	BS_R0115	error	Specimen voucher for bacteria and unclassified sequences.	Attribute 'specimen_voucher' is not appropriate for bacteria and unclassified sequences.
73	BioSample	BS_R0116	error	Invalid specimen_voucher format	Valid specimen voucher format is "[<institution-code>:[<collection-code>:]]<specimen_id>"	The institution_code and the identifier for the specimen (a part or whole of an animal or plant) from which the sequence was obtained. Value format is '[<institution_code>:[<collection_code>:]]<specimen_id>'. Please see <a href="/ddbj/qualifiers-e.html#specimen_voucher">specimen_voucher qualifier</a> for details.	配列が得られた標本（動植物個体の一部または全体）が維持管理されている管理団体と ID を [<institution_code>:[<collection_code>:]]<specimen_id> の書式で記載します。詳細は <a href="/ddbj/qualifiers.html#specimen_voucher">specimen_voucher qualifier</a> を参照してください。
74	BioSample	BS_R0117	warning	Invalid specimen_voucher	The institution-code and/or collection-code must be registered in the NCBI BioCollections. Valid specimen voucher format is "[<institution-code>:[<collection-code>:]]<specimen_id>"	For valid institution and collection codes, please see <a href="https://www.ncbi.nlm.nih.gov/biocollections/">the NCBI BioCollections database</a> or <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">the BioCollections list file</a>.	有効な institution と collection code については、<a href="https://www.ncbi.nlm.nih.gov/biocollections/">NCBI BioCollections</a> もしくは <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">BioCollections list file</a> を参照してください。
75	BioSample	BS_R0118	error	Invalid bio_material format	Valid bio_material format is "[<institution-code>:[<collection-code>:]]<material_id>"	The institution_code and the identifier for the biological material (living individual or strain) from which the nucleic acid sequence was obtained. Value format is '[<institution_code>:[<collection_code>:]]<material_id>'. Please see <a href="/ddbj/qualifiers-e.html#bio_material">bio_material qualifier</a> for details.	配列が得られた生物材料（生きている個体・系統）の保管施設と ID を [<institution_code>:[<collection_code>:]]<material_id> の書式で記載します。詳細は <a href="/ddbj/qualifiers.html#bio_material">bio_material qualifier</a> を参照してください。
76	BioSample	BS_R0119	warning	Invalid bio_material	The institution-code and/or collection-code must be registered in the NCBI BioCollections. Valid bio_material format is "[<institution-code>:[<collection-code>:]]<material_id>"	For valid institution and collection codes, please see <a href="https://www.ncbi.nlm.nih.gov/biocollections/">the NCBI BioCollections database</a> or <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">the BioCollections list file</a>.	有効な institution と collection code については、<a href="https://www.ncbi.nlm.nih.gov/biocollections/">NCBI BioCollections</a> もしくは <a href="https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/coll_dump.txt">BioCollections list file</a> を参照してください。
77	BioSample	BS_R0122	warning	Invalid GISAID accession	Invalid GISAID accession number	A GISAID accession must in the format of "EPI_[A-Z]+_[0-9]+" (e.g. EPI_ISL_581860)	GISAID アクセッション番号の形式は "EPI_[A-Z]+_[0-9]+" であること (例 EPI_ISL_581860)。
78	BioSample	BS_R0128	error	Missing BioProject ID for locus tag prefix	Provide a BioProject ID for a locus tag prefix.	Provide a BioProject ID for a locus tag prefix.	locus tag prefix に対応する BioProject アクセッション番号を記載します。
79	BioSample	BS_R0129	warning	BioSample not found	BioSample accession(s) is not registered in your account. Please provide a valid BioSample accession(s).	Provide valid BioSample accession(s) registered in your account for the derived_from attribute.	自身のアカウントで登録された BioSample アクセッション番号を derived_from に記載します。
80	BioSample	BS_R0130	error	package_vs_organism > MIMARKS.specimen	Must NOT be a metagenome. Scientific name must NOT end with 'metagenome'
81	BioSample	BS_R0132	error	Null value for infraspecific identifier	Enter non-null value (other than missing etc) for infraspecific identifiers (strain, isolate, cultivar and ecotype) for samples of assembled genome sequences and clinical isolates.
82	BioSample	BS_R0133	warning	Null value for infraspecific identifier	If the sample is for an assembled genome sequence, enter non-null value (other than missing etc) for infraspecific identifiers (strain, isolate, cultivar and ecotype).
83	BioSample	BS_R0134	warning	Non-identical identifiers among organism/strain/isolate	The identifier in the organism name after 'sp./bacterium/archeon' differs from strain/isolate. Use strain/isolate as the identifier for the organism not registered in the NCBI Taxonomy.
84	BioSample	BS_R0135	error	Invalid strain value	The following values are not allowed: 'bacteria', 'clinical isolate', 'environmental', 'microbial', 'no', 'soil', 'sp', 'sp.', strain', 'whole organism', 'yes'. Additionally, strain name should not start with 'subsp.', 'serovar' or the organism name. All checks are case-insensitive. Provide a valid strain name rather than a descriptive term. This is generally the identifier that you use in your lab work for this sample.			https://www.ddbj.nig.ac.jp/biosample/validation-e.html#BS_R0135
85	BioSample	BS_R0136	warning	Invalid datetime format	Invalid datetime format. Follow ISO 8601 standard "YYYY-mm-dd", "YYYY-mm" or "YYYY-mm-ddThh:mm:ssZ" (e.g., 1990-10-30, 1990-10 or 1990-10-30T14:41:36Z). Collection times must be in Coordinated Universal Time (UTC). Times without time zone are processed as UTC. Non-UTC times are converted to UTC.
86	BioSample	BS_R0137	error	Missing reporting level term	When you do not report "collection_date" and "geo_loc_name", provide missing value in format "missing: reporting level term" (e.g. "missing: control sample") to declare both the absence of a true value as well as the reason. A reporting level term is required in these two attributes.
87	BioSample	BS_R0138	error	Invalid Attribute value for controlled terms	Attribute value is not in controlled terms.	Attribute value is not in controlled terms. See <a href="https://github.com/ddbj/ddbj_validator/blob/main/conf/biosample/controlled_terms.json">the json file</a> for the controlled terms.
88	BioSample	BS_R0139	error	Invalid lat_lon	Invalid lat_lon. Specify as degrees latitude and longitude in format "d[d.dddddddd] N\|S d[dd.dddddddd] W\|E".
89	BioSample	BS_R0140	warning	Invalid taxonomy for genome sample	If the sample is for a genome assembly derived from an unidentified/unpublished organism, a species-level informal name in the form of "Genus sp. strain/isolate" should be used. Leave the taxonomy_id empty when submitting a new informal name.
90	BioSample	BS_R0141	error	Uncultured organism name for MIMAG package	Organism names containing 'uncultured' cannot be used for Metagenome-assembled Genome Sequences (MIMAG) package.
91
92
93
94
95
96
97
98
99
100