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Uniprot matches for these enzymes# 0# 1# 2# 3# 4
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PhylogenySpecies/StrainTax ID2.5.1.102.5.1.292.5.1.321.3.99.315.5.1.19Price
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Enzyme Name(2E,6E)-farnesyl diphosphate synthase. geranylgeranyl diphosphate synthase (idsA)15-cis-phytoene synthase (crtB)phytoene desaturase (lycopene-forming)lycopene beta-cyclase
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Expasy Pagehttp://enzyme.expasy.org/EC/2.5.1.10http://enzyme.expasy.org/EC/2.5.1.29http://enzyme.expasy.org/EC/2.5.1.32http://enzyme.expasy.org/EC/1.3.99.31http://enzyme.expasy.org/EC/5.5.1.19
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Uniprot Candidateshttp://www.uniprot.org/uniprot/?query=ec%3A2.5.1.10+AND+taxonomy%3ABacteria&sort=scorehttp://www.uniprot.org/uniprot/?query=ec%3A2.5.1.29+AND+taxonomy%3ABacteria+-ec%3A2.5.1.10&sort=scorehttp://www.uniprot.org/uniprot/?query=ec%3A2.5.1.32+AND+taxonomy%3ABacteria+-ec%3A2.5.1.10&sort=scorehttp://www.uniprot.org/uniprot/?query=ec%3A1.3.99.31+AND+taxonomy%3ABacteria+-ec%3A2.5.1.10&sort=scorehttp://www.uniprot.org/uniprot/?query=ec%3A5.5.1.19+AND+taxonomy%3ABacteria+-ec%3A2.5.1.10&sort=score
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Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus >Sulfolobus acidocaldarius330779P39464
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Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus >Sulfolobus solfataricus273057P95999
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Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halobacterium >Halobacterium salinarum (strain ATCC 29341)478009169235957 with Q8PW34 = 4e-95169236196 with P54977 = 1e-40169236367 with P21685 = 3e-59B0R753
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Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halobacterium >Halobacterium salinarum (strain ATCC 700922) (Halobacterium halobium)64091Q9HNE5
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Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina >Methanosarcina mazei192952Q8PW34
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Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium tuberculosis complex >Mycobacterium bovis233413P65861
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Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium tuberculosis complex >Mycobacterium tuberculosis1773P65860
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Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces >Streptomyces coelicolor100226Q9ACU1
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Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces >Streptomyces griseus1911P54977
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Bacteria › Cyanobacteria › Chroococcales › Synechococcus >Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)114081299587 with Q8PW34 = 2e-47P3726981300055Q55276 (11133036)
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Bacteria › Cyanobacteria › Chroococcales › Synechocystis >Synechocystis sp. (strain PCC 6803)1111708P37294
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Bacteria › Cyanobacteria › Oscillatoriales › Arthrospira >Spirulina platensis118562O07333
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Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus >Thermus thermophilus262724P37270
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Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium>Rhizobium sp. (strain NGR234)394P55350
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Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Paracoccus >Paracoccus sp. (strain N81106) (Agrobacterium aurantiacum)81397P54975P54978Uniprot Evidence Typeshttp://www.uniprot.org/manual/protein_existence
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Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter >Rhodobacter capsulatus272942P17060P17056Evidence at protein level
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Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter >Rhodobacter sphaeroides272943P54976P54905Evidence at transcript level
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Bacteria › Proteobacteria › Gammaproteobacteriagamma proteobacterium NOR5-3566466B8KEV4Inferred from homology
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Bacteria › Proteobacteria › Gammaproteobacteriagamma proteobacterium NOR51-B565045B8KWB6B8KT19Predicted
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Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › MarichromatiumMarichromatium purpuratum 984765910F9TWK9F9TXD6F9TXD5
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Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › NitrosococcusNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)323261Q3J9J9Q3J905
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Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › ThiocapsaThiocapsa marina 5811768671F9U518F9U7N0F9U6N6To lookup UniProt sequences: http://www.uniprot.org/uniprot/Q55276
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Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › ThiorhodococcusThiorhodococcus drewsii AZ1765913G2DZK1G2DXP2G2E703To lookup GI accession numbers: http://www.ncbi.nlm.nih.gov/protein/11133036
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Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Ectothiorhodospiraceae › ThiorhodospiraThiorhodospira sibirica ATCC 700588765914G4E3H9 (349794913)G4E5B5 (349792383)G4E3G7 (349794901), G4E2L2, and G4E1U2 (all predicted)To lookup nucleotide sequences: http://www.ebi.ac.uk/ena/data/view/X74599
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Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia >Escherichia vulneris566P22873P22872 (117495)P22871Q01331 (231912)
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Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia >Escherichia coli Nissle 1917316435L8CVX2 (441711994)442605391 (2.5.1.90) or 442606687 (2.5.1.1 or 2.5.1.10) ??nonenonenone
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Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pantoea >Pantoea ananas (Erwinia uredovora)553P21684P21683 and G9AY33 (predicted)P21685378769592 or 386018483
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Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Halomonadaceae › Zymobacter group › whitefly endosymbionts › Candidatus PortieraCandidatus Portiera aleyrodidarum BT-QVLC1239881J9WRY8J9WW29 (405779954)
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Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas syringaePseudomonas syringae pv. syringae B641260626L8NB61
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Bacteria › Proteobacteria › Gammaproteobacteria › sulfur-oxidizing symbiontsendosymbiont of Riftia pachyptila (vent Ph05)1048808G2DBY1G2DBX8
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Bacteria › Proteobacteria › Gammaproteobacteria › Thiotrichales › Francisellaceae › FrancisellaFrancisella tularensis subsp. holarctica (strain LVS)376619Q2A3G1
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PSI-BLAST matches titled “lycopene beta cyclase” within Gammaproteobacteria
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Bacteria › Proteobacteria › Gammaproteobacteria ›
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Enterobacteriales > Enterobacteriaceae > PantoeaPantoea agglomerans IG11110694390434750 or 390435700390434746390434747390434748
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Enterobacteriales > Enterobacteriaceae > PantoeaPantoea vagans C9-1712898298717274 or 308185891298717270298717271298717272
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Enterobacteriales > Enterobacteriaceae > PantoeaPantoea sp. Sc1593105381406458381406462381406461381406460// strain is stated to be a non-pigmented variant
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Enterobacteriales > Enterobacteriaceae > PantoeaPantoea sp. SL1_M5697871372274693372274697372274696372274695
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Enterobacteriales > Enterobacteriaceae > PantoeaPantoea stewartii subsp. stewartii DC283660596378582384 or 378578430378582380218614225378582382
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Oceanospirillales › Halomonadaceae › Zymobacter group › whitefly endosymbionts › Candidatus PortieraCandidatus Portiera aleyrodidarum BT-QVLC1239881noneJ9WRY8 (407453238)405779956J9WW29 (405779954)
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Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group > Pseudomonas syringae group genomosp. 3 > Pseudomonas syringae pv. maculicolaPseudomonas syringae pv. maculicola str. ES4326629265422646392422648887422648886422648885
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unclassified Gammaproteobacteria > OMG group > OM60 cladegamma proteobacterium IMCC3088876044329897187329897189329897188329897190
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Hardy Diagnostic CandidatesPriceCommentType
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Bacteria > Actinobacteria > Actinobacteria > Actinobacteridae > Actinomycetales > Corynebacterineae > Mycobacteriaceae > MycobacteriumMycobacterium avium, ATCC® 25291Mycobacterium avium subsp. avium ATCC 25291 (taxid:553481)ZP_05218529ZP_05217823ZP_05217822ZP_05217825, ZP_05217824, ZP_05216505, ZP_05218169, ZP_05215050$54.80// all the exact straingram-positive aerobe (saprotrophic)
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Bacteria > Actinobacteria > Actinobacteria > Actinobacteridae > Actinomycetales > Corynebacterineae > Mycobacteriaceae > MycobacteriumMycobacterium smegmatis, ATCC® 14468Mycobacterium smegmatis (taxid:1772)YP_007294536, ZP_20973194, YP_886690YP_886691, ZP_20973195, YP_007294537YP_007293069, ZP_20973192, YP_007294534, YP_006567049, YP_006567050, ZP_20977644, YP_890976, YP_006571307, YP_007294535$54.80// not the exact strain
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Bacteria > Actinobacteria > Actinobacteria > Actinobacteridae > Actinomycetales > Corynebacterineae > Nocardiaceae > NocardiaNocardia brasiliensis, ATCC® 19296Nocardia brasiliensis ATCC 19296 (taxid:1206724)YP_006809606, YP_006807244YP_006807246, YP_006809607YP_006805765, YP_006810450, YP_006809604, YP_006809605, YP_006808221, YP_006809325, YP_006809244, YP_006808696, YP_006808707, YP_006808121, YP_006809983$48.59// lacks # 2 & 3
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Bacteria > Actinobacteria > Actinobacteria > Actinobacteridae > Actinomycetales > Micrococcineae > Micrococcaceae > MicrococcusMicrococcus luteus, ATCC® 10240no$44.10
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Bacteria > Actinobacteria > Actinobacteria > Actinobacteridae > Actinomycetales > Micrococcineae > Micrococcaceae > MicrococcusMicrococcus luteus, ATCC® 4698 (NCTC 2665)Micrococcus luteus ATCC 4698 (taxid:465515)YP_002958145YP_002958144, ZP_06247517 (T2), YP_002957604 (T2), EFD50123ZP_06502824, YP_002958141, YP_002958142, ZP_06502823$372.60Saprotrophic
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Bacteria > Actinobacteria > Actinobacteria > Actinobacteridae > Actinomycetales > Micrococcineae > Micrococcaceae > MicrococcusMicrococcus luteus, ATCC® 49732no$44.10
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Bacteria > Actinobacteria > Actinobacteria > Actinobacteridae > Actinomycetales > Propionibacterineae > Propionibacteriaceae > PropionibacteriumPropionibacterium acnes, ATCC® 11827no but Propionibacterium acnes ATCC 11828 (taxid:1091045) looks dam closenone (NCBI)none (T1 or T2 or NCBI)ZP_16471488, ZP_06426781, ZP_16554806$48.59// lacks # 2 & 3
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Bacteria > Bacteroidetes/Chlorobi group > Bacteroidetes > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > MyroidesMyroides odoratus, ATCC® 4651 (DSM 2801)Myroides odoratus ATCC 4651 (taxid:929704)EHQ42335, EHQ43046EHQ44271EHQ44272ZP_09670979, ZP_09672247, EHQ44265$48.59// all the exact straingram-negative aerobes
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Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > VibrioVibrio alginolyticus, ATCC® 17749Vibrio alginolyticus (taxid:663)none (NCBI)none (T1 or T2 or NCBI)YP_006454748$44.10// lacks # 2 & 3
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EHQ42335 - polyprenyl synthetase, Trans-hexaprenyltranstransferase, octaprenyl-diphosphate synthaseZP_09670979 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FAD-dependent dehydrogenase
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EHQ43046 - isoprenyl synthetase, Polyprenyl synthetase, geranyltranstransferase, Dimethylallyltransferase, FarnesyltranstransferaseZP_09672247 - monooxygenase FAD-binding, flavin-dependent dehydrogenase, tryptophan halogenase
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EHQ44265 - lycopene cyclase, membrane protein
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