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ObjectivesDecJanFebMarAprMayJuneJuly
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Create a community of open APIs
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-Commons API Registry (Carbon, Calcium, Helium, Xenon, Argon, Copper, Nitrogen, Phosphorus, and Sodium)306090120150180
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Add APIs to master DCPPC Slide (all teams)
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KC3 Teams - Add all API documentation
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Team Carbon
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Team Calcium
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Team Helium
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Team Xenon
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All DCPPC Members - Add all API documentation
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Team Argon
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Team Copper
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Team Nitrogen
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Team Oxygen
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Team Phosphorus
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Team Sodium
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KC3 Teams - Register all APIs and documentation to smartAPI respository (Carbon, Calcium, Helium, Xenon)
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All DCPPC Members-Register all APIs and documentation to smartAPI repository (Argon, Copper, Nitrogen, Oxygen, Phosphorus, Sodium)
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-Specification of API Best Practices/API Landscape Analysis
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Workflow Standards
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-Development of Workflow Standards
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Team Calcium
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Team Xenon, Continued development of workflow standards
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Team Helium
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-Create sandboxes to access workflow execution on stacks
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Team Calcium
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Implement GA4GH WES in the Calcium full stack
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Team Xenon
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Execute workflows on full stacks using GA4GH TES API with CWL or WDL in a sandbox environment
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APIs Access to Data
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-Deploy APIs to access clinical data
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Team Carbon (PIC-SURE API)
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Deploy PIC-SURE API to access variables and full-files
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Team Calcium
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Development of APIs for object level access across cloud environments (minimal metadata)
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Team Xenon
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Seven Bridges Datasets API to query and access pilot datasets
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-Deploy APIs to access genomic data
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Team Carbon
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Deploy PIC-SURE API to access VCF files
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Team Calcium
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Team Xenon
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Team Helium
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-Create sandboxes to access private GTEx data
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Team Carbon*
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Team Calcium*
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-Create sandboxes to access TOPMED studies
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Team Carbon (Jackson sandbox clinical data)*
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User interface to access curated data
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User interface to access via JupyterHUB to examples of analysis/data vis PIC-SURE API
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User interface and API access via Postman with examples to access data via PIC-SURE API
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Team Calcium*
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-Authentication and Authorization to access patient data
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Team Carbon (eRA commons solution for Auth)
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Team Calcium (SAM+OpenID Connect)
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-APIs to upload data (all teams)
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MetaAPI
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