ABCDEFGHIJKLMNOPQRSTUVWXYZAAABACADAEAFAGAHAIAJAKALAMAN
1
Information: This spreadsheet contains a list of published ZooMS markers for different taxa. Note this is a ‘living’ document and will continue to be updated as new ZooMS data becomes available. Reference to the original publication reporting the marker can be found in the ‘Reference’ column and in the ‘Reference list’ tab. The nomenclature of markers include those proposed in Brown, S., Douka, K., Collins, M. & Richter, K. K. On the standardization of ZooMS nomenclature. J. Proteomics 104041 (2020). You are welcome to comment on this spreadsheet and share as widely as you like. Please contact Sam Presslee with any questions or comments: https://www.york.ac.uk/archaeology/about/research-centres/bioarch/analytical-services/
2
3
4
5
6
7
COL1A1T47 (Cet1/P1)
COL1A2T85 (A or 1)
COL1A2T85 (A' or 1)
COL1A2T21COL1A2T54COL1A1T22COL1A2T43 (B or 4)COL1A1T62 (2)COL1A1T28 (3)COL1A2T45 ( C )
COL1A2T26 (Cet2/P2)
COL1A2T76COL1A1T21COL1A2T69 (D or 5)COL1A2T60COL1A1T85 (6)COL1T66/67 (P)COL1A2T41 ( E )
COL1A1T55/56 (F or 7)
COL1A1T55/56 (F' or 7)
COL1A2T67 (G or 8)
COL1A2T67 (G' or 8)
COL1A2T3 (9)LC-MS/MS verfied markers highlighted in bold
8
peptide position >COL1ɑ1 508 - 519COL1ɑ2 978 - 990COL1ɑ2 978 - 990COL1ɑ2 244 - 258COL1ɑ2 604 - 618COL1ɑ1 238-252COL1ɑ2 484 - 498
COL1ɑ1 688 - 704
COL1ɑ1 295-309COL1ɑ2 502 - 519COL1ɑ2 292 - 309COL1ɑ2 889 - 906
COL1ɑ1 220 - 237
COL1ɑ2 793 - 816
COL1ɑ2 658 - 687
COL1ɑ1 910 - 934COL1ɑ1 934-963COL1ɑ1 733-756COL1ɑ2 454 - 483COL1ɑ1 586 - 618COL1ɑ1 586 - 618COL1ɑ2 757 - 789
COL1ɑ2 757 - 789
COL1ɑ2 10 - 42
9
OrderFamilyCommon nameSpeciesɑ1 508ɑ2 978ɑ2 978 (+16)ɑ2 244ɑ2 604ɑ1 238ɑ2 484ɑ1 688ɑ1 309ɑ2 502ɑ2 292ɑ2 889ɑ1 220ɑ2 793ɑ2 658ɑ1 910ɑ1 934ɑ1 733ɑ2 454ɑ1 586ɑ1 586 (+16)ɑ2 757ɑ2 757 (+16)ɑ2 10Additional peaksReferenceLC-MS/MS verified?Notes
10
ArtiodactylaBalaenidaeBowhead whaleBalaena mysticetus1079.61205.61453.71566.81682.82135.12883.43023.4Buckley et al 2014N
11
ArtiodactylaBalaenidaeRight whaleEubalaena sp.1079.61205.61453.71566.81682.82135.12883.43023.4Buckley et al 2014; Kirby et al 2013Y
12
ArtiodactylaBalaenopteridaeSei whaleBalaenoptera borealis1079.61205.61441.71550.81652.82135.12883.43023.4Buckley et al 2014Y
13
ArtiodactylaBalaenopteridaeBlue whaleBalaenoptera musculus1079.61205.61453.71550.81652.82105.12883.43023.4Buckley et al 2014Y
14
ArtiodactylaBalaenopteridaeFin whaleBalaenoptera physalus1079.61205.61453.71566.81652.82135.12883.43023.4Buckley et al 2014; Kirby et al 2013Partial
15
ArtiodactylaBalaenopteridaeMinke whaleBalaenoptera sp.1079.61189.61205.61441.71566.81652.82135.12849.42883.42899.43007.43023.4Buckley et al 2009; Buckley and Collins 2011; Buckley et al 2014; Kirby et al 2013; Welker et al 2016Y
Welker et al (markers predicted from genetic data)
16
ArtiodactylaBalaenopteridaeGray whaleEschrichtius robustus1079.61205.61453.71566.81652.82135.12899.43023.4Kirby et al 2013; Hufthammer at al 2018N
17
ArtiodactylaBalaenopteridaeHumpback whaleMegaptera novaeangliae1079.61205.61453.71566.81652.82135.12869.43023.4Buckley et al 2014; Kirby et al 2013Partial
18
ArtiodactylaBovidaeImpalaAepyceros melampus1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Welker et al 2016Y
19
ArtiodactylaBovidaeHartebeestAlcelaphus buselaphus1105.61180.61196.61427.71550.81648.815902131.12792.42883.42899.43017.43033.43203Desmond et al 2018; Culley et al 2021; Janzen et al. 2021Partial
20
ArtiodactylaBovidaeBarbary SheepAmmotragus lervia1196.61427.71580.82131.12883.43033.43227Desmond et al 2018N
21
ArtiodactylaBovidaeSpringbokAntidorcas marsupialis1105.61180.61196.61427.71550.81648.81532.82131.12792.42883.42899.43017.43033.4Coutu et al 2021Y
22
ArtiodactylaBovidaeBisonBison sp.1105.61192.61208.61427.71580.81648.82131.12792.42853.42869.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
Welker et al (markers predicted from genetic data)
23
ArtiodactylaBovidaeYakBos grunniens1105.61192.61208.61427.71580.81648.82131.12792.42853.42869.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
Welker et al (markers predicted from genetic data)
24
ArtiodactylaBovidaeAurochBos primigenius1105.61192.61208.61427.71580.81648.82131.12792.42853.42869.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
Welker et al (markers predicted from genetic data)
25
ArtiodactylaBovidaeDomestic CattleBos taurus1105.61192.61208.61427.71580.81648.815322131.12792.42853.42869.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
26
ArtiodactylaBovidaeWater buffaloBubalus bubalis1105.61192.61208.61455.71580.81648.82131.12792.42853.42869.43059.43075.4Buckley et al 2009; Welker et al 2016Partial
Welker et al (markers predicted from genetic data)
27
ArtiodactylaBovidaeBezoarCapra aegagrus3093.4Buckley et al 2010Y
28
ArtiodactylaBovidaeDomestic GoatCapra hircus1105.61180.61196.61427.71580.81648.82131.12792.42883.42899.43077.43093.4Buckley et al 2009; Buckley et al 2010; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
Welker et al (markers predicted from genetic data)
29
ArtiodactylaBovidaeAlpine IbexCapra ibex1105.61180.61196.61427.71580.81648.82131.12792.42883.42899.43077.43093.4Buckley et al 2010; Welker et al 2016Y
30
ArtiodactylaBovidaeAders' duikerCephalophus adersi1105.61192.61208.61427.71580.81648.815742131.12792.42853.42869.43043.43059.4Culley et al 2021; Janzen et al. 2021Y
31
ArtiodactylaBovidaeBlue wildebeestConnochaetes taurinus1105.61180.61196.61427.71550.81648.815902131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Partial
32
ArtiodactylaBovidaeHirolaDamaliscus hunteri1105.61180.61196.61427.71550.81648.815902131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021N
33
ArtiodactylaBovidaeTsessebeDamaliscus lunatus1105.61180.61196.61427.71550.81648.815902131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Partial
34
ArtiodactylaBovidaeThomson's GazelleEudorcas thomsonii1105.61180.61196.61427.71550.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
35
ArtiodactylaBovidaeGazelleGazella sp.1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.43227Buckley and Kansa 2011; Welker et al 2016; Desmond et al 2018Partial
36
ArtiodactylaBovidaeRoan AntelopeHippotragus equinus1105.61180.61196.61427.71580.81648.815882131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021Y
37
ArtiodactylaBovidaeSable AntelopeHippotragus niger1105.61180.61196.61427.71580.81648.815882131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021Y
38
ArtiodactylaBovidaeWaterbuckKobus ellipsiprymnus1105.61150.61166.61427.71550.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
39
ArtiodactylaBovidaeKobKobus kob1105.61150.61166.61427.71550.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
40
ArtiodactylaBovidaeKirk's Dik-dikMadoqua kirkii1105.61166.61182.61427.71550.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
41
ArtiodactylaBovidaeGrant's GazelleNanger granti1105.61180.61196.61427.71550.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
42
ArtiodactylaBovidaeSuniNeotragus moschatus1105.61180.61196.61427.71580.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
43
ArtiodactylaBovidaeKlipspringerOreotragus oreotragus1105.61192.61208.61427.71580.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
44
ArtiodactylaBovidaeOribiOurebia ourebi1105.61180.61196.61427.71550.81648.815322131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021Y
45
ArtiodactylaBovidaeMusk oxOvibos moschatus1105.61192.61208.61427.71580.81648.82131.12792.42883.42899.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
Welker et al (markers predicted from genetic data)
46
ArtiodactylaBovidaeDomestic SheepOvis aries1105.61180.61196.61427.71580.81648.82131.12792.42883.42899.43017.43033.4Buckley et al 2009; Buckley et al 2010; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
Welker et al (markers predicted from genetic data)
47
ArtiodactylaBovidaeMouflonOvis orientalis3033.4Buckley et al 2010Y
48
ArtiodactylaBovidaeTibetan AntelopePantholops hodgsonii1105.61180.61196.61427.71580.81648.82131.12792.42857.42873.43017.43033.4Welker et al 2016N
Welker et al (markers predicted from genetic data)
49
ArtiodactylaBovidaeGrey rhebokPelea capreolus1105.61150.61166.61427.71550.81648.81532.82131.12792.42883.42899.43017.43033.4Coutu et al 2021Partial
50
ArtiodactylaBovidaeBlue duiker (Cephalophinae)Philantomba monticola1105.61192.61208.61427.71580.81648.82131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021N
Janzen et al (markers predicted from genetic data)
51
ArtiodactylaBovidaeBharalPseudois nayaur3033.4Buckley et al 2010Y
52
ArtiodactylaBovidaeSteenbokRaphicerus campestris1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Culley et al 2021; Janzen et al. 2021N
Janzen et al (markers predicted from genetic data)
53
ArtiodactylaBovidaeChamoisRupicapra rupicapra1105.61180.61196.61427.71580.81648.82131.12792.42883.42899.43017.43033.4Buckley et al 2010; Welker et al 2016Y
54
ArtiodactylaBovidaeSaigaSaiga tatarica1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Buckley et al 2009; Welker et al 2016Y
55
ArtiodactylaBovidaeCommon duikerSylvicapra grimmia1105.61192.61208.61427.71580.81648.81532.82131.12792.42853.42869.43043.43059.4Culley et al 2021; Janzen et al. 2021, Coutu et al 2021Y
56
ArtiodactylaBovidaeAfrican buffaloSyncerus caffer1105.61192.61208.61455.71580.81648.815322131.12792.42853.42869.43059.43075.4Culley et al 2021; Janzen et al. 2021Y
57
ArtiodactylaBovidaeElandTaurotragus sp.1105.61192.61208.61427.71580.81648.82131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021Y
58
ArtiodactylaBovidaeMountain nyalaTragelaphus buxtoni1105.61192.61208.61427.71580.81648.82131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021N
59
ArtiodactylaBovidaeBongoTragelaphus eurycerus1105.61192.61208.61427.71580.81648.82131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021Y
60
ArtiodactylaBovidaeLesser kuduTragelaphus imberis1105.61192.61208.61427.71580.81648.815322131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021N
61
ArtiodactylaBovidaeBushbuckTragelaphus scriptus1105.61192.61208.61427.71580.81648.815322131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021N
62
ArtiodactylaBovidaeSitatungaTragelaphus spekii1105.61192.61208.61427.71580.81648.815322131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021N
63
ArtiodactylaBovidaeGreater kuduTragelaphus strepsiceros1105.61192.61208.61427.71580.81648.815322131.12792.42883.42899.43043.43059.4Culley et al 2021; Janzen et al. 2021N
64
ArtiodactylaCamelidaeBactrian CamelCamelus bactrianus1105.61221.61235.61443.71550.81634.82131.12820.42883.42899.42975.42991.4Rybczynski et al 2013; Welker et al 2016Partial
Welker et al (markers predicted from genetic data)
65
ArtiodactylaCamelidaeDromedary camelCamelus dromedarius1105.61221.61235.61453.71550.82131.12883.42899.42975.42991.4Buckley et al 2009; Rybczynski et al 2013; Welker et al 2016Partial
Welker et al (markers predicted from genetic data)
66
ArtiodactylaCamelidaeAlpacaLama pacos1105.61221.61235.61453.71550.82131.13017.43033.4Welker et al 2016N
Welker et al (markers predicted from genetic data)
67
ArtiodactylaCamelidaeVicunaLama vicugna1221.61453.71550.82131.12845.42861.43017.43033.4Buckley et al 2009Y
68
ArtiodactylaCervidaeElkAlces alces1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Jensen et al (2020)Y
69
ArtiodactylaCervidaeChital DeerAxis axis1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Welker et al 2016Y
70
ArtiodactylaCervidaeRoe deerCapreolus capreolus1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43043.43059.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; McGrath et al 2019Y
71
ArtiodactylaCervidaeRed deerCervus elaphus1105.61180.61196.61427.71550.81648.82131.122162792.42883.42899.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Jensen et al (2020)Y
72
ArtiodactylaCervidaeFallow deerDama dama1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Buckley et al 2009; Welker et al 2016Y
73
ArtiodactylaCervidaePere Davids deerElaphurus davidianus1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Welker et al 2016N
74
ArtiodactylaCervidaeAmazonian brown brocket deerMazama nemorivaga1105.61180.61196.61427.71580.82131.12792.42883.42899.43043.43059.4Buckley et al 2017aPartial
75
ArtiodactylaCervidaeCentral American red brocketMazama temama1105.61180.61196.61427.71580.82145.12792.42883.42899.43043.43059.4Buckley et al 2017aPartial
76
ArtiodactylaCervidaeIrish ElkMegaloceros giganteus1105.61180.61196.61427.71550.81648.82131.12792.42883.42899.43017.43033.4Welker et al 2016Y
77
ArtiodactylaCervidaeMule DeerOdocoileus hemionus1105.61180.61196.61427.71593.81648.82131.12792.42883.42899.43043.43059.4Welker et al 2016N
78
ArtiodactylaCervidaeWhite-tailed deerOdocoileus virginianus1105.61180.61196.61427.71580.81648.82131.12792.42883.42899.43043.43059.41593Welker et al 2016; Buckley et al 2017a; McGrath et al 2019N
79
ArtiodactylaCervidaePuduPudu sp.1105.61180.61196.61427.71593.81648.82131.12792.42883.42899.4Welker et al 2016; Buckley, Harvey and Chamberlain 2017N
80
ArtiodactylaCervidaeCaribou/ReindeerRangifer tarandus1105.61150.61166.61427.71580.81648.82131.12792.42883.42899.43077.43093.41182Buckley and Collins 2011; Kirby et al 2013; Welker et al 2016; Buckley, Harvey and Chamberlain 2017; McGrath et al 2019Partial
81
ArtiodactylaDelphinidaeCommon dolphinDelphinus delphis1079.61205.61453.71566.81638.82119.12866.42883.43023.4Buckley et al 2009; Buckley et al 2014; Kirby et al 2013Y
82
ArtiodactylaDelphinidaePilot whaleGlobicephala sp.1063.61205.61453.71566.81638.82119.12883.43023.4Buckley et al 2014; Kirby et al 2013Y
83
ArtiodactylaDelphinidaeRisso's dolphinGrampus griseus1063.61189.61205.61453.71566.81638.82119.12866.42883.42899.43023.4Buckley et al 2009; Buckley and Collins 2011; Buckley et al 2014; Kirby et al 2013Partial
84
ArtiodactylaDelphinidaeWhite-beaked dolphinLagenorhynchus albirostris1079.61205.61453.71566.81638.82119.12866.42883.43023.4Buckley et al 2009; Buckley et al 2014; Kirby et al 2013Y
85
ArtiodactylaDelphinidaeWhite-sided dolphinLagenorhynchus sp.1079.61205.61453.71566.81652.82119.12883.43023.4Buckley et al 2014Y
86
ArtiodactylaDelphinidaeOrcaOrcinus orca1079.61189.61205.61453.71566.81652.82119.12766.42883.42899.43007.43023.4Buckley et al 2014; Kirby et al 2013; Welker et al 2016Partial
Welker et al (markers predicted from genetic data)
87
ArtiodactylaDelphinidaeFalse killer whalePseudorca crassidens1063.61205.61453.71566.81638.82119.12883.43023.4Buckley et al 2014Y
88
ArtiodactylaDelphinidaeStriped dolphinStenella coeruleoalba1079.61189.61205.61453.71566.81638.82119.12866.42883.42899.43023.4Buckley et al 2009; Buckley and Collins 2011; Buckley et al 2014; Kirby et al 2013Y
89
ArtiodactylaDelphinidaeBottlenose dolphinTursiops sp.1079.61189.61205.61453.71566.81638.82119.12866.42883.42899.43007.43023.4Buckley et al 2009; Buckley et al 2014; Kirby et al 2013; Welker et al 2016Y
Welker et al (markers predicted from genetic data)
90
ArtiodactylaGiraffidaeGiraffeGiraffa sp.1105.61427.71580.81648.82131.12792.42883.42899.4Welker et al 2016N
91
ArtiodactylaHippopotamidaePygmy hippoChoeropsis liberiensis1189.61205.61453.71581.82147.12869.42885.43017.43033.4Buckley et al 2009Y
92
ArtiodactylaHippopotamidaeHippoHippopotamus amphibius1105.61189.61205.61453.71580.81648.82147.12792.42869.42885.43017.43033.4Buckley et al 2009; Welker et al 2016Y
93
ArtiodactylaMonodontidaeBeluga whaleDelphinapterus leucas1079.61189.61205.61443.71550.81652.82121.12883.42899.43051.43067.4Buckley and Collins 2011; Buckley et al 2014; Kirby et al 2013Y
94
ArtiodactylaMonodontidaeNarwhalMonodon monoceros1079.61189.61205.61443.71550.81652.82089.12883.42899.43051.43067.4Buckley and Collins 2011; Buckley et al 2014; Kirby et al 2013Y
95
ArtiodactylaPhocoenidaeHarbor porpoisePhocoena phocoena1079.61205.61453.71550.81652.82119.12883.43023.4Buckley et al 2014; Kirby et al 2013Y
96
ArtiodactylaPhocoenidaeDall's porpoisePhocoenoides dalli1079.61205.61453.71550.81652.82119.12883.43023.4Kirby et al 2013N
97
ArtiodactylaPhyseteridaeSperm whalePhyseter macrocephalus1079.61189.61205.61453.71550.81652.82133.12883.42899.43039.4Buckley et al 2009; Buckley and Collins 2011; Buckley et al 2014; Kirby et al 2013; Welker et al 2016Y
Welker et al (markers predicted from genetic data)
98
ArtiodactylaSuidaePigSus domesticus1105.61180.61196.61453.71550.81647.82131.12820.42883.42899.43017.43033.4Buckley et al 2009; Buckley and Collins 2011; Welker et al 2016; Buckley, Harvey and Chamberlain 2017Partial
Welker et al (markers predicted from genetic data)
99
ArtiodactylaZiphiidaeBottlenose whaleHyperoodon sp.1063.61205.61441.71550.81638.82091.12883.43023.4Buckley et al 2014Y
100
ArtiodactylaZiphiidaeSowerby's whaleMesoplodon bidens1063.61205.61441.71550.81638.82091.12883.43023.4Buckley et al 2014Y