A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | AA | AB | AC | AD | AE | AF | AG | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | order | family | genus | species | host_genome_voucher | sym_genome_voucher | strain | partner_type | tissue_source | resource_type | methods | research_group | contact | publication_status | anticipated_release_date | data_link | publication_link | publication_reference | notes | t | |||||||||||||
2 | Scleractinia | Acroporidae | Acropora | millepora | NA | host | holobiont | genome | PacBio / 10x genomics / Illumina | Matz, Przeworski | matz@utexas.edu, mp3284@columbia.edu | published | released | https://www.dropbox.com/s/hezqx79m3fk1l8e/Amil_v2.01_annotated.zip?dl=0 | https://doi.org/10.1126/science.aba4674 | ||||||||||||||||||
3 | Scleractinia | Acroporidae | Acropora | cervicornis | NA | host | holobiont/sperm | genome | short read/ long read | Baums | baums@psu.edu | unpublished | Mid 2021 | N/A | N/A | ||||||||||||||||||
4 | Scleractinia | Acroporidae | Acropora | palmata | NA | host | holobiont/sperm | genome | short read/ long read/ HiC | Baums | baums@psu.edu | unpublished | Mid 2021 | N/A | N/A | ||||||||||||||||||
5 | Scleractinia | Acroporidae | Acropora | clathrata | host | genome | short read | Allen Chen' Lab/Parisa Alidoost Salimi | P_Alidoostsalimi@yahoo.com | unpublished | Alidoost Salimi et al. (unpublished) | ||||||||||||||||||||||
6 | Scleractinia | Acroporidae | Acropora | downingi | host | genome | short read | Allen Chen' Lab/Parisa Alidoost Salimi | P_Alidoostsalimi@yahoo.com | unpublished | Alidoost Salimi et al. (unpublished) | ||||||||||||||||||||||
7 | Scleractinia | Acroporidae | Acropora | cervicornis | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez | joslo@nova.edu | unpublished | 2021 | |||||||||||||||||||||
8 | Scleractinia | Acroporidae | Acropora | cervicornis | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez | joslo@nova.edu | unpublished | 2021 | |||||||||||||||||||||
9 | Scleractinia | Acroporidae | Acropora | cytherea | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
10 | Scleractinia | Acroporidae | Acropora | glauca | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | https://www.biorxiv.org/content/10.1101/2021.07.20.453148v1 | López-Nandam et al. (preprint) | |||||||||||||||||||
11 | Scleractinia | Acroporidae | Acropora | hyacinthus | host | sperm | genome | PacBio/Illumina/Omni-C | Palumbi+Albright | elopez-nandam@calacademy.org | biorxiv | 2021 | https://www.ncbi.nlm.nih.gov/assembly/GCA_020536085.1/ (You can download the associated gff3, proteins fasta, and other annotation files for this assembly here: https://drive.google.com/drive/u/1/folders/15dh6eE8q850frTRVtglndXtzxSwj673g) | https://www.biorxiv.org/content/10.1101/2021.07.20.453148v1 | López-Nandam et al. (preprint) | ||||||||||||||||||
12 | Scleractinia | Acroporidae | Acropora | intermedia | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
13 | Scleractinia | Acroporidae | Acropora | muricata | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
14 | Scleractinia | Acroporidae | Acropora | palmata | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
15 | Scleractinia | Acroporidae | Acropora | pulchra | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
16 | Scleractinia | Acroporidae | Acropora | spathulata | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
17 | Scleractinia | Acroporidae | Acropora | valida | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
18 | Scleractinia | Agariciidae | Agaricia | agaricites | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
19 | Scleractinia | Acroporidae | Alveopora | japonica | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
20 | Alcyonaceae | Gorgoniidae | Antillogorgia | bipinnata | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | unpublished | ? | ||||||||||||||||||||||
21 | Scleractinia | Rhizangiidae | Astrangia | poculata | NA | host | holobiont | genome | short read/ long read/ HiC | Baums | baums@psu.edu | unpublished | 2021 | N/A | N/A | ||||||||||||||||||
22 | Scleractinia | Dendrophyllidae | Balanophyllia | europaea | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
23 | Scleractinia | Plerogyridae | Blastomussa | merleti | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
24 | Scleractinia | Plerogyridae | Blastomussa | wellsi | GCA_947652115.1 | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | published | 2023 | GCA_947652115.1 | |||||||||||||||||||
25 | Suessiales | Symbiodiniaceae | Breviolum | minutum | SSB01 | symbiont | culture | transcriptome | Grossman | agrossman@carnegiescience.edu | published | released | Xiang et al. 2015, The Plant Journal | ||||||||||||||||||||
26 | Suessiales | Symbiodiniaceae | Breviolum | aenigmaticum | mac04-487 | symbiont | culture | transcriptome | Parkinson | jparkinson@usf.edu | published | released | Parkinson et al. 2016, Genome Biology and Evolution | ||||||||||||||||||||
27 | Suessiales | Symbiodiniaceae | Breviolum | minutum | mac703, Mf1.05b, rt002, rt351 | symbiont | culture | transcriptome | Parkinson | jparkinson@usf.edu | published | released | Parkinson et al. 2016, Genome Biology and Evolution | ||||||||||||||||||||
28 | Suessiales | Symbiodiniaceae | Breviolum | pseudominutum | rt146 | symbiont | culture | transcriptome | Parkinson | jparkinson@usf.edu | published | released | Parkinson et al. 2016, Genome Biology and Evolution | ||||||||||||||||||||
29 | Suessiales | Symbiodiniaceae | Breviolum | psygmophilum | HIAp, Mf10.14b.02, PurPFlex, rt141 | symbiont | culture | transcriptome | Parkinson | jparkinson@usf.edu | published | released | Parkinson et al. 2016, Genome Biology and Evolution | ||||||||||||||||||||
30 | Suessiales | Symbiodiniaceae | Breviolum | minutum | Mf1.05b | symbiont | culture | genome | Satoh | norisky@oist.jp | published | released | Shoguchi et al. 2013, Current Biology | ||||||||||||||||||||
31 | Suessiales | Symbiodiniaceae | Breviolum | minutum | Mf1.05b | symbiont | culture | transcriptome | Voolstra | christian.voolstra@uni-konstanz.de | published | released | Bayer et al. 2012, PLoS One | ||||||||||||||||||||
32 | Suessiales | Symbiodiniaceae | Breviolum | faviinorum | symbiont | holobiont | transcriptome | Parkinson | jparkinson@usf.edu | unpublished | Parkinson et al. (unpublished) | ||||||||||||||||||||||
33 | Suessiales | Symbiodiniaceae | Breviolum | sp. B5 | symbiont | holobiont | transcriptome | Parkinson | jparkinson@usf.edu | unpublished | Parkinson et al. (unpublished) | ||||||||||||||||||||||
34 | Suessiales | Symbiodiniaceae | Breviolum | psygmophilum | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
35 | Suessiales | Symbiodiniaceae | Breviolum | minutum | symbiont | genome | Aranda | manuel.aranda@kaust.edu.sa | unpublished | Aranda et al. (unpublished) | |||||||||||||||||||||||
36 | Suessiales | Symbiodiniaceae | Breviolum | psygmophilum | symbiont | culture | genome | Parkinson | jparkinson@usf.edu | unpublished | first half 2023 | Parkinson et al. (unpublished) | |||||||||||||||||||||
37 | Rhizostomeae | Cassiopeidae | Cassiopea | frondosa | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | unpublished | ? | ||||||||||||||||||||||
38 | Suessiales | Symbiodiniaceae | Cladocopium | sp. | symbiont | transcriptome | Chan | c.chan1@uq.edu.au | published | released | Gonzalez-Pech et al. 2016, Frontiers in Marine Science | ||||||||||||||||||||||
39 | Suessiales | Symbiodiniaceae | Cladocopium | sp. | symbiont | holobiont | transcriptome | short read | Davies | daviessw@gmail.com | published | released | http://sites.bu.edu/davieslab/files/2017/11/CladeC_Symbiodinium_transcriptome.zip | https://www.frontiersin.org/articles/10.3389/fmars.2018.00150/full | |||||||||||||||||||
40 | Suessiales | Symbiodiniaceae | Cladocopium | sp. | symbiont | transcriptome | Davies | daviessw@gmail.com | published | released | Davies et al. 2016, Frontiers in Marine Science | ||||||||||||||||||||||
41 | Suessiales | Symbiodiniaceae | Cladocopium | goreaui | MMETSP1367, MMETSP1369 | symbiont | culture | transcriptome | Keeling | pkeeling@mail.ubc.ca | published | released | Keeling et al. 2014, PLoS Biology | ||||||||||||||||||||
42 | Suessiales | Symbiodiniaceae | Cladocopium | sp. | MMETSP1370-1 | symbiont | culture | transcriptome | Keeling | pkeeling@mail.ubc.ca | published | released | Keeling et al. 2014, PLoS Biology | ||||||||||||||||||||
43 | Suessiales | Symbiodiniaceae | Cladocopium | sp. | symbiont | transcriptome | Palumbi | spalumbi@stanford.edu | published | released | Ladner et al. 2012, BMC Evolutionary Biology | ||||||||||||||||||||||
44 | Suessiales | Symbiodiniaceae | Cladocopium | sp. C3 | symbiont | genome | Satoh | norisky@oist.jp | published | released | Shoguchi et al. 2018, BMC Genomics | ||||||||||||||||||||||
45 | Suessiales | Symbiodiniaceae | Cladocopium | goreaui | symbiont | genome | Voolstra | christian.voolstra@uni-konstanz.de | published | released | Liu et al. 2018, Communications Biology | ||||||||||||||||||||||
46 | Suessiales | Symbiodiniaceae | Cladocopium | thermophilum | symbiont | genome | Voolstra | christian.voolstra@uni-konstanz.de | published | released | Voolstra et al. (unpublished) | ||||||||||||||||||||||
47 | Suessiales | Symbiodiniaceae | Cladocopium | goreaui | MI-SCF055 | symbiont | culture | transcriptome | van Oppen | madeleine.van@unimelb.edu.au | published | released | Levin et al. 2016, Molecular Biology and Evolution | ||||||||||||||||||||
48 | Suessiales | Symbiodiniaceae | Cladocopium | goreaui | WSY | symbiont | culture | transcriptome | van Oppen | madeleine.van@unimelb.edu.au | published | released | Levin et al. 2016, Molecular Biology and Evolution | ||||||||||||||||||||
49 | Suessiales | Symbiodiniaceae | Cladocopium | C15 | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
50 | Suessiales | Symbiodiniaceae | Cladocopium | goreaui | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
51 | Suessiales | Symbiodiniaceae | Cladocopium | goreaui | SCF055 | symbiont | culture | genome | short reads + long reads | Chan | c.chan1@uq.edu.au | unpublished | Chan et al. (unpublished) | ||||||||||||||||||||
52 | Suessiales | Symbiodiniaceae | Cladocopium | infistulum | rt203 | symbiont | culture | genome | Parkinson | jparkinson@usf.edu | unpublished | first half 2022 | Parkinson et al. (unpublished) | ||||||||||||||||||||
53 | Scleractinia | Faviidae | Colpophyllia | natans | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
54 | Scleractinia | Merulinidae | Cyphastrea | salae | host | genome | short read | Parisa Alidoost Salimi/Pargol Ghavam Mostafavi | P_Alidoostsalimi@yahoo.com | published | https://link.springer.com/article/10.1007/s11033-021-06251-x | Alidoost Salimi et al. 2021, Mol Biol Rep. | |||||||||||||||||||||
55 | Scleractinia | Meandrinidae | Dendrogyra | cylindrus | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
56 | Scleractinia | Faviidae | Diploria | labyrinthiformis | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
57 | Suessiales | Symbiodiniaceae | Durusdinium | trenchii | MMETSP1377 | symbiont | culture | transcriptome | Keeling | pkeeling@mail.ubc.ca | published | released | Keeling et al. 2014, PLoS Biology | ||||||||||||||||||||
58 | Suessiales | Symbiodiniaceae | Durusdinium | trenchii | symbiont | transcriptome | Palumbi | spalumbi@stanford.edu | published | released | Ladner et al. 2012, BMC Evolutionary Biology | ||||||||||||||||||||||
59 | Suessiales | Symbiodiniaceae | Durusdinium | trenchii | CCMP2556 | symbiont | culture | genome | Rodriguez-Lanetty | rodmauri@fiu.edu | published | released | Rodriguez-Lanetty et al. (unpublished) | ||||||||||||||||||||
60 | Suessiales | Symbiodiniaceae | Durusdinium | trenchii | symbiont | genome | Satoh | norisky@oist.jp | published | released | |||||||||||||||||||||||
61 | Suessiales | Symbiodiniaceae | Durusdinium | trenchii | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
62 | Suessiales | Symbiodiniaceae | Durusdinium | trenchii | A001 | symbiont | culture | genome | Chan/Suggett | c.chan1@uq.edu.au | unpublished | ||||||||||||||||||||||
63 | Suessiales | Symbiodiniaceae | Durusdinium | trenchii | symbiont | genome | Suggett | David.Suggett@uts.edu.au | unpublished | Suggett et al. (unpublished) | |||||||||||||||||||||||
64 | Scleractinia | Merulinidae | Echinopora | lamellosa | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
65 | Suessiales | Symbiodiniaceae | Effrenium | voratum | CCMP421 | free-living | culture | genome | 10X Genomics linked reads | Rodriguez-Lanetty/Chan | c.chan1@uq.edu.au | unpublished | Chan et al. (unpublished) | ||||||||||||||||||||
66 | Suessiales | Symbiodiniaceae | Effrenium | voratum | RCC1521 | free-living | culture | genome | short reads + long reads | Chan | c.chan1@uq.edu.au | unpublished | |||||||||||||||||||||
67 | Suessiales | Symbiodiniaceae | Effrenium | voratum | rt-383 | free-living | culture | genome | short reads + long reads | Chan | c.chan1@uq.edu.au | unpublished | |||||||||||||||||||||
68 | Suessiales | Symbiodiniaceae | Effrenium | sp. | CCMP421 (MMETSP1122-5) | symbiont | culture | transcriptome | Keeling | pkeeling@mail.ubc.ca | published | released | Keeling et al. 2014, PLoS Biology | ||||||||||||||||||||
69 | Suessiales | Symbiodiniaceae | Effrenium | voratum | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
70 | Malacalcyonaceae | Plexauridae | Eunicea | knighti | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | unpublished | ? | ||||||||||||||||||||||
71 | Scleractinia | Merulinidae | Favites | pentagona | host | genome | short read | Parisa Alidoost Salimi/Pargol Ghavam Mostafavi | P_Alidoostsalimi@yahoo.com | published | https://link.springer.com/article/10.1007/s11033-021-06251-x | Alidoost Salimi et al. 2021, Mol Biol Rep. | |||||||||||||||||||||
72 | Cardiida | Cardiidae | Fragum | fragum | GCA_946902895 | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | published | 2023 | GCA_946902895 | ||||||||||||||||||||
73 | Cardiida | Cardiidae | Fragum | sueziense | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | unpublished | ? | ||||||||||||||||||||||
74 | Cardiida | Cardiidae | Fragum | whitleyi | GCA_948146395 | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | published | 2023 | GCA_948146395 | ||||||||||||||||||||
75 | Suessiales | Symbiodiniaceae | Freudenthalidium | endolithicum | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
76 | Suessiales | Symbiodiniaceae | Freudenthalidium | heronense | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
77 | Suessiales | Symbiodiniaceae | Freudenthalidium | sp. | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
78 | Suessiales | Symbiodiniaceae | Fugacium | kawagutii | CCMP2468 (MMETSP0132_2C) | symbiont | culture | transcriptome | Keeling | pkeeling@mail.ubc.ca | published | released | Keeling et al. 2014, PLoS Biology | ||||||||||||||||||||
79 | Suessiales | Symbiodiniaceae | Fugacium | kawagutii | CCMP2468 | symbiont | culture | genome | Lin | senjie.lin@uconn.edu | published | released | Lin et al. 2015, Science | ||||||||||||||||||||
80 | Suessiales | Symbiodiniaceae | Fugacium | kawagutii | CCMP2468 | symbiont | culture | genome | Voolstra | christian.voolstra@uni-konstanz.de | published | released | Liu et al. 2018, Communications Biology | ||||||||||||||||||||
81 | Suessiales | Symbiodiniaceae | Fugacium | kawagutii | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
82 | Scleractinia | Euphylliidae | Galaxea | acrhelia | NA | host | holobiont | transcriptome | short read | Kenkel | ckenkel@usc.edu | published | released | https://dornsife.usc.edu/labs/carlslab/data/ | https://academic.oup.com/gigascience/article/6/9/gix074/4091589 | ||||||||||||||||||
83 | Scleractinia | Euphylliidae | Galaxea | astreata | NA | host | holobiont | transcriptome | short read | Kenkel | ckenkel@usc.edu | published | released | https://dornsife.usc.edu/labs/carlslab/data/ | https://academic.oup.com/gigascience/article/6/9/gix074/4091589 | ||||||||||||||||||
84 | Scleractinia | Euphylliidae | Galaxea | fascicularis | GCA_948470475.1 | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | published | 2023 | GCA_948470475.1 | |||||||||||||||||||
85 | Suessiales | Symbiodiniaceae | Gerakladium | endoclionum | symbiont | holobiont | transcriptome | Strehlow | strehow@biology.sdu.dsk | published | released | Strehlow et al. 2020 Coral Reefs | |||||||||||||||||||||
86 | Suessiales | Symbiodiniaceae | Gerakladium | sp. | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
87 | Scleractinia | Merulinidae | Goniastrea | retiformis | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
88 | Scleractinia | Poritidae | Goniopora | columna | NA | host | holobiont | transcriptome | short read | Kenkel | ckenkel@usc.edu | published | released | https://dornsife.usc.edu/labs/carlslab/data/ | https://academic.oup.com/gigascience/article/6/9/gix074/4091589 | ||||||||||||||||||
89 | Scleractinia | Poritidae | Goniopora | columna | host | genome | short read | Parisa Alidoost Salimi/Pargol Ghavam Mostafavi | P_Alidoostsalimi@yahoo.com | published | https://link.springer.com/article/10.1007/s11033-021-06251-x | Alidoost Salimi et al. 2021, Mol Biol Rep. | |||||||||||||||||||||
90 | Scleractinia | Poritidae | Goniopora | djiboutiensis | host | genome | short read | Parisa Alidoost Salimi/Pargol Ghavam Mostafavi | P_Alidoostsalimi@yahoo.com | published | https://link.springer.com/article/10.1007/s11033-021-06251-x | Alidoost Salimi et al. 2021, Mol Biol Rep. | |||||||||||||||||||||
91 | Suessiales | Symbiodiniaceae | Halluxium | pauxillum | symbiont | culture | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
92 | Scleractinia | Agariciidae | Helioseris | cucullata | host | holobiont | genome | PacBio | Bongaerts, Hernandez-Agreda | alejhernandez@calacademy.org | unpublished | 2023 | |||||||||||||||||||||
93 | Cardiida | Cardiidae | Hippopus | hippopus | GCA_946811185 | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | published | 2023 | GCA_946811185 | ||||||||||||||||||||
94 | Scleractinia | Acroporidae | Isopora | palifera | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
95 | Scleractinia | Agariciidae | Leptoseris | scabra | host and symbiont | holobiont | genome | PacBio / Omni-C | Barshis, Radice | barshis@gmail.com | unpublished | 2023 | osf.io/kdm8f/ | Leptoseris cf. scabra (perhaps L. cf. columna); mesophotic; American Sāmoa | |||||||||||||||||||
96 | Scleractinia | Meandrinidae | Meandrina | meandrites | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez | joslo@nova.edu | unpublished | 2021 | |||||||||||||||||||||
97 | Scleractinia | Meandrinidae | Meandrina | meandrites | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
98 | Scleractinia | Meandrinidae | Meandrina | meandrites | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | unpublished | ? | ||||||||||||||||||||||
99 | Scleractinia | Lobophyllidae | Micromussa | lordhowensis | host and symbiont | holobiont | genome | short read / long read / Hi-C | Sweet / Coral Genome Project | M.Sweet@derby.ac.uk | unpublished | 2021 | |||||||||||||||||||||
100 | Anthoathecata | Milleporidae | Millepora | alcicornis | host and symbiont | holobiont | genome | short read / long read / Hi-C | Lopez / Photosymbiosis in Marine Animals (ASG Project) | unpublished | ? |