ABCDEFGHIJKLMNOPQRSTUVWXYZAA
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103x_No_Hi-C
103x_No_Hi-C
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Hap_1Hap_2
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A C G T N IUPAC Other GC GC_stdev
A C G T N IUPAC Other GC GC_stdev
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0.3005 0.1994 0.1996 0.3005 0.0000 0.0000 0.0000 0.3990 0.1157
0.3005 0.1995 0.1995 0.3005 0.0000 0.0000 0.0000 0.3990 0.1061
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Main genome scaffold total: 669
Main genome scaffold total: 600
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Main genome contig total: 669
Main genome contig total: 600
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Main genome scaffold sequence total: 1721.116 MB
Main genome scaffold sequence total: 1702.657 MB
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Main genome contig sequence total: 1721.116 MB 0.000% gap
Main genome contig sequence total: 1702.657 MB 0.000% gap
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Main genome scaffold N/L50: 54/9.55 MB
Main genome scaffold N/L50: 55/8.553 MB
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Main genome contig N/L50: 54/9.55 MB
Main genome contig N/L50: 55/8.553 MB
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Main genome scaffold N/L90: 198/2.273 MB
Main genome scaffold N/L90: 203/2.105 MB
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Main genome contig N/L90: 198/2.273 MB
Main genome contig N/L90: 203/2.105 MB
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Max scaffold length: 30.877 MB
Max scaffold length: 51.148 MB
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Max contig length: 30.877 MB
Max contig length: 51.148 MB
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Number of scaffolds > 50 KB: 530
Number of scaffolds > 50 KB: 510
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% main genome in scaffolds > 50 KB: 99.74%
% main genome in scaffolds > 50 KB: 99.83%
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Minimum Number Number Total Total Scaffold
Minimum Number Number Total Total Scaffold
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Scaffold of of Scaffold Contig Contig
Scaffold of of Scaffold Contig Contig
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Length Scaffolds Contigs Length Length Coverage
Length Scaffolds Contigs Length Length Coverage
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-------- -------------- -------------- -------------- -------------- --------
-------- -------------- -------------- -------------- -------------- --------
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All 669 669 1,721,115,647 1,721,115,647 100.00%
All 600 600 1,702,657,087 1,702,657,087 100.00%
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10 KB 669 669 1,721,115,647 1,721,115,647 100.00%
10 KB 600 600 1,702,657,087 1,702,657,087 100.00%
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25 KB 628 628 1,720,361,854 1,720,361,854 100.00%
25 KB 577 577 1,702,210,602 1,702,210,602 100.00%
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50 KB 530 530 1,716,673,028 1,716,673,028 100.00%
50 KB 510 510 1,699,736,388 1,699,736,388 100.00%
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100 KB 453 453 1,710,877,621 1,710,877,621 100.00%
100 KB 436 436 1,694,510,908 1,694,510,908 100.00%
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250 KB 351 351 1,695,007,054 1,695,007,054 100.00%
250 KB 365 365 1,682,900,639 1,682,900,639 100.00%
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500 KB 302 302 1,677,333,665 1,677,333,665 100.00%
500 KB 316 316 1,665,327,052 1,665,327,052 100.00%
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1 MB 257 257 1,643,822,085 1,643,822,085 100.00%
1 MB 271 271 1,632,602,677 1,632,602,677 100.00%
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2.5 MB 186 186 1,521,216,815 1,521,216,815 100.00%
2.5 MB 187 187 1,497,567,288 1,497,567,288 100.00%
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5 MB 112 112 1,256,781,963 1,256,781,963 100.00%
5 MB 111 111 1,221,161,780 1,221,161,780 100.00%
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10 MB 49 49 818,654,356 818,654,356 100.00%
10 MB 41 41 721,661,524 721,661,524 100.00%
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25 MB 5 5 133,864,905 133,864,905 100.00%
25 MB 4 4 139,105,108 139,105,108 100.00%
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50 MB 1 1 51,148,335 51,148,335 100.00%
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