starlingsden_suppl.xlsx

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R	S	T
1	# feature	class	assembly	assembly_unit	seq_type	chromosome	genomic_accession	start	end	strand	product_accession	non-redundant_refseq	related_accession	name	symbol	GeneID	locus_tag	feature_interval_length	product_length	attributes

2	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	631	1554	-					lpxC		NLA_0010	924
3	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	631	1554	-	CBN86246.1			UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosmine deacetylase	lpxC		NLA_0010	924	307
4	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	1717	2046	-					fbp		NLA_0020	330
5	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	1717	2046	-	CBN86247.1			peptidyl-prolyl cis-trans isomerase	fbp		NLA_0020	330	109
6	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	2617	3570	+							NLA_0030	954
7	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	2617	3570	+	CBN86248.1			putative glycerate dehydrogenase			NLA_0030	954	317
8	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	3644	5698	-					metG		NLA_0040	2055
9	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	3644	5698	-	CBN86249.1			methionyl-tRNA synthetase	metG		NLA_0040	2055	684
10	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	5814	7652	-					glmS		NLA_0050	1839
11	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	5814	7652	-	CBN86250.1			glucosamine--fructose-6-phosphate aminotransferase [isomerizing]	glmS		NLA_0050	1839	612
12	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	7933	8454	+							NLA_0060	522
13	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	7933	8454	+	CBN86251.1			putative lipoprotein			NLA_0060	522	173
14	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	8875	10200	-					gna33		NLA_0070	1326
15	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	8875	10200	-	CBN86252.1			putative membrane-bound lytic murein transglycosylase (Gna33)	gna33		NLA_0070	1326	441
16	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	10411	11250	+							NLA_0080	840
17	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	10411	11250	+	CBN86253.1			putative integral membrane protein			NLA_0080	840	279
18	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	11247	12413	+							NLA_0090	1167
19	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	11247	12413	+	CBN86254.1			putative lipoprotein			NLA_0090	1167	388
20	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	12556	13821	+							NLA_0100	1266
21	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	12556	13821	+	CBN86255.1			possible membrane protein			NLA_0100	1266	421
22	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	14020	14325	-					phnA		NLA_0110	306
23	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	14020	14325	-	CBN86256.1			putative phosphonoacetate hydrolase	phnA		NLA_0110	306	101
24	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	14400	15770	-					glmU		NLA_0120	1371
25	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	14400	15770	-	CBN86257.1			bifunctional GlmU protein [includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.57)]	glmU		NLA_0120	1371	456
26	gene	pseudogene	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	15825	16172	-							NLA_0130	348		pseudo
27	CDS	without_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	15825	16172	-				conserved hypothetical protein (pseudogene)			NLA_0130	348		pseudo
28	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	16296	17297	+							NLA_0140	1002
29	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	16296	17297	+	CBN86259.1			putative solute-binding periplasmic protein			NLA_0140	1002	333
30	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	17542	18240	+							NLA_0150	699
31	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	17542	18240	+	CBN86260.1			putative inner membrane protein			NLA_0150	699	232
32	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	18439	18750	+							NLA_0160	312
33	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	18439	18750	+	CBN86261.1			conserved hypothetical protein			NLA_0160	312	103
34	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	18851	20419	-							NLA_0170	1569
35	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	18851	20419	-	CBN86262.1			peptide methionine sulfoxide reductase			NLA_0170	1569	522
36	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	20565	22073	+					pilA		NLA_0180	1509
37	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	20565	22073	+	CBN86263.1			regulatory protein PilA	pilA		NLA_0180	1509	502
38	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	22422	22691	+							NLA_0190	270
39	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	22422	22691	+	CBN86264.1			hypothetical protein			NLA_0190	270	89
40	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	23601	25751	-							NLA_0200	2151
41	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	23601	25751	-	CBN86265.1			putative inner membrane protein			NLA_0200	2151	716
42	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	25842	27068	-							NLA_0210	1227
43	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	25842	27068	-	CBN86266.1			pilT-like protein			NLA_0210	1227	408
44	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	27234	28277	-					pilT		NLA_0220	1044
45	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	27234	28277	-	CBN86267.1			putative pilus retraction protein	pilT		NLA_0220	1044	347
46	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	28391	29095	+							NLA_0230	705
47	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	28391	29095	+	CBN86268.1			conserved hypothetical protein			NLA_0230	705	234
48	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	29083	29484	+							NLA_0240	402
49	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	29083	29484	+	CBN86269.1			putative lipoprotein			NLA_0240	402	133
50	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	29533	30324	+					proC		NLA_0250	792
51	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	29533	30324	+	CBN86270.1			putative pyrroline-5-carboxylate reductase	proC		NLA_0250	792	263
52	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	30471	30887	+					dksA		NLA_0260	417
53	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	30471	30887	+	CBN86271.1			putative DnaK suppressor protein	dksA		NLA_0260	417	138
54	rRNA		GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	31815	32800	+				16S ribosomal RNA				986
55	gene	tRNA	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	32922	32995	+					tRNA-Ile			74
56	tRNA		GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	32922	32995	+				tRNA-Ile	tRNA-Ile			74
57	gene	tRNA	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	33004	33076	+					tRNA-Ala			73
58	tRNA		GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	33004	33076	+				tRNA-Ala	tRNA-Ala			73
59	rRNA		GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	33450	36061	+				23S ribosomal RNA				2612
60	rRNA		GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	36440	36548	+				5S ribosomal RNA				109
61	gene	pseudogene	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	36604	37052	+							NLA_0270	449		pseudo
62	CDS	without_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	36604	37052	+				putative DNA transport competence protein (pseudogene)			NLA_0270	450		pseudo
63	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	37102	37263	-							NLA_0290	162
64	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	37102	37263	-	CBN86273.1			conserved hypothetical protein			NLA_0290	162	53
65	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	37310	38431	+					dnaJ		NLA_0300	1122
66	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	37310	38431	+	CBN86274.1			chaperone DnaJ protein	dnaJ		NLA_0300	1122	373
67	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	38627	40645	+							NLA_0310	2019
68	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	38627	40645	+	CBN86275.1			putative inner membrane transport protein			NLA_0310	2019	672
69	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	40689	41246	-					rfbC		NLA_0320	558
70	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	40689	41246	-	CBN86276.1			dTDP-4-dehydrorhamnose 3,5-epimerase	rfbC		NLA_0320	558	185
71	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	41291	42157	-					rfbA		NLA_0330	867
72	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	41291	42157	-	CBN86277.1			glucose-1-phosphate thymidylyltransferase	rfbA		NLA_0330	867	288
73	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	42354	43436	-					rfbB		NLA_0340	1083
74	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	42354	43436	-	CBN86278.1			dTDP-glucose 4,6-dehydratase	rfbB		NLA_0340	1083	360
75	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	43437	44453	-					galE		NLA_0350	1017
76	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	43437	44453	-	CBN86279.1			UDP-glucose 4-epimerase	galE		NLA_0350	1017	338
77	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	44568	46841	+					tex		NLA_0360	2274
78	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	44568	46841	+	CBN86280.1			putative RNA-associated protein	tex		NLA_0360	2274	757
79	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	47040	47381	+							NLA_0370	342
80	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	47040	47381	+	CBN86281.1			putative membrane protein			NLA_0370	342	113
81	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	47556	48770	+					gltS		NLA_0380	1215
82	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	47556	48770	+	CBN86282.1			sodium/glutamate symport carrier protein	gltS		NLA_0380	1215	404
83	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	48870	49886	+							NLA_0390	1017
84	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	48870	49886	+	CBN86283.1			putative lipoprotein			NLA_0390	1017	338
85	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	49897	50094	+							NLA_0400	198
86	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	49897	50094	+	CBN86284.1			conserved hypothetical protein			NLA_0400	198	65
87	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	50519	51898	-							NLA_0410	1380
88	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	50519	51898	-	CBN86285.1			putative outer membrane transport protein			NLA_0410	1380	459
89	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	52206	53678	-					pykA		NLA_0420	1473
90	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	52206	53678	-	CBN86286.1			pyruvate kinase	pykA		NLA_0420	1473	490
91	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	54020	54571	+							NLA_0430	552
92	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	54020	54571	+	CBN86287.1			putative inner membrane protein			NLA_0430	552	183
93	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	54620	54745	-							NLA_0440	126
94	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	54620	54745	-	CBN86288.1			putative lipoprotein			NLA_0440	126	41
95	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	54742	55584	-							NLA_0450	843
96	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	54742	55584	-	CBN86289.1			conserved hypothetical protein			NLA_0450	843	280
97	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	55808	56728	+					pyrB		NLA_0460	921
98	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	55808	56728	+	CBN86290.1			aspartate carbamoyltransferase catalytic chain	pyrB		NLA_0460	921	306
99	gene	protein_coding	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	56738	57196	+					pyrI		NLA_0470	459
100	CDS	with_protein	GCA_000196295.1	Primary Assembly	chromosome		FN995097.1	56738	57196	+	CBN86291.1			aspartate carbamoyltransferase regulatory chain	pyrI		NLA_0470	459	152