RDP_MIMARKS v.4.0 (some new definitions, new Preferred Units column)
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Structured Comment NameItemUser Input TemplateUnits TemplatePreferred Units
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project_nameproject name
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submitted_to_insdcsubmitted to insdc
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investigation_typeinvestigation type
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experimental_factorexperimental factor
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geo_loc_namegeographic location (country and/or sea,region)
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lat_longeographic location (latitude and longitude)
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collection_datecollection date
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env_biomeenvironment (biome)
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env_featureenvironment (feature)
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env_materialenvironment (material)
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env_packageenvironmental package air
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subspecf_gen_linsubspecific genetic lineage
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extrachrom_elementsextrachromosomal elements
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source_mat_idsource material identifiers
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biotic_relationshipobserved biotic relationship
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trophic_leveltrophic level
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rel_to_oxygenrelationship to oxygen
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isol_growth_condtisolation and growth condition
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samp_collect_devicesample collection device or method
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samp_mat_processsample material processing
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samp_sizeamount or size of sample collectedmillliter, gram, milligram
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nucl_acid_extnucleic acid extraction
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nucl_acid_ampnucleic acid amplification
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lib_sizelibrary size
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lib_reads_seqdlibrary reads sequenced
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lib_const_methlibrary construction method
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lib_vectorlibrary vector
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lib_screenlibrary screening strategy
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target_genetarget gene
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target_subfragmenttarget subfragment
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seq_methsequencing method
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pcr_primerspcr primers
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pcr_condpcr conditions
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adaptersadapters
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midmultiplex identifiers
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seq_quality_checksequence quality check
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chimera_checkchimera check
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assemblyassembly
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soprelevant standard operating procedures
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urlrelevant electronic resources
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altaltitudemeter
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elevelevationmeter
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barometric_pressbarometric pressuremillibar
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carb_dioxidecarbon dioxidemicromole per liter
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carb_monoxidecarbon monoxidemicromole per liter
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chem_administrationchemical administration
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humidityhumiditygram per cubic meter
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methanemethanemicromole per liter
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misc_parammiscellaneous parameter
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organism_countorganism countnumber of organism per cubic meter
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oxygenoxygenmilligram per liter, parts per million
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oxy_stat_sampoxygenation status of sample
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perturbationperturbation
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pollutantspollutantsgram, mole per liter, milligram per liter
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resp_part_matterrespirable particulate mattermicrogram per cubic meter
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samp_salinitysample salinitypractical salinity unit, percentage
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samp_store_dursample storage duration
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samp_store_locsample storage location
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samp_store_tempsample storage temperaturedegree Celsius
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samp_vol_we_dna_extsample volume or weight for DNA extractionmillliter, gram, milligram
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solar_irradiancesolar irradiancewatts per square meter, ergs per square centimeter per second
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temptemperaturedegree Celsius
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ventilation_rateventilation ratecubic meter per minute, liters per second
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ventilation_typeventilation type
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volatile_org_compvolatile organic compoundsmicrogram per cubic meter, parts per million
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wind_directionwind direction
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wind_speedwind speedmeter per second, kilometer per hour
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Air
Built-environment
Host-associated
Human-associated
Human-gut
Human-oral
Human-skin
Human-vaginal
Microbial mat/biofilm
Misc-Natural/Artif-Env
Plant-assoc.
Sediment
Soil
Wastewater/Sludge
Water