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From (abbr.)From (name)To (abbr.)To (name)Reported
Value		Tracing
Method		SpeciesNomenclatureReference
Title		Reference AuthorsReference
Citation		PubMed IDCollatorAdditional
Annotations
2
6bLayer 6b, isocortexACAdAnterior cingulate area dorsal partabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.Exp Brain Res. 1994;100(1):67-84.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
3
6bLayer 6b, isocortexAUDpPrimary auditory areaabsentretrograde tracersRatSwanson (BM2) 1998Patterns of sensory intermodality relationships in the cerebral cortex of the rat.Paperna T, Malach R.J Comp Neurol. 1992 Jan 8;315(2):200-16.1865010Bota, M.Collator note: this connection is considered to be absent.
4
6bLayer 6b, isocortexECTEctorhinal areaabsentretrograde tracersRatSwanson (BM2) 1998Cortical afferents of the perirhinal, postrhinal, and entorhinal cortices of the ratBurwell RD, Amaral DG.Neurosci Lett. 1992 Aug 31;143(1-2):237-42.9700566Bota, M.Collator note: this connection is considered to be absent.
5
6bLayer 6b, isocortexENTlEntorhinal area, lateral partabsentretrograde tracersRatSwanson (BM2) 1998Cortical afferents of the perirhinal, postrhinal, and entorhinal cortices of the ratBurwell RD, Amaral DG.J Comp Neurol. 1984 Oct 20;229(2):242-56.9700566Bota, M.Collator note: this connection is considered to be absent.
6
6bLayer 6b, isocortexENTm
Entorhinal area medial part, dorsal zone
absentretrograde tracersRatSwanson (BM2) 1998Cortical afferents of the perirhinal, postrhinal, and entorhinal cortices of the ratBurwell RD, Amaral DG.J Comp Neurol. 1986 Jan 1;243(1):71-87.9700566Bota, M.Collator note: this connection is considered to be absent.
7
6bLayer 6b, isocortexILAInfralimbic areaabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.J Comp Neurol. 1991 Jun 15;308(3):432-56.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
8
6bLayer 6b, isocortexLHAjp
Lateral hypothalamic area juxtaparaventricular region
absentCTBRatSwanson (BM3) 2004Distinct patterns of neuronal inputs and outputs of the juxtaparaventricular and suprafornical regions of the lateral hypothalamic area in the male ratHahn JD, Swanson LW.J Comp Neurol. 1992 Sep 8;323(2):167-97.20170674Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors.
9
6bLayer 6b, isocortexLHAjp
Lateral hypothalamic area juxtaparaventricular region
absentCTBRatSwanson (BM3) 2004Distinct patterns of neuronal inputs and outputs of the juxtaparaventricular and suprafornical regions of the lateral hypothalamic area in the male ratHahn JD, Swanson LW.Brain Res Bull. 1982 Jul-Dec;9(1-6):321-53.20170674Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors.
10
6bLayer 6b, isocortexLHAs
Lateral hypothalamic area suprafornical region
absentCTBRatSwanson (BM3) 2004Distinct patterns of neuronal inputs and outputs of the juxtaparaventricular and suprafornical regions of the lateral hypothalamic area in the male ratHahn JD, Swanson LW.Brain Res Bull. 1984 Dec;13(6):751-84.20170674Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors.
11
6bLayer 6b, isocortexLSvLateral septal nucleus ventral partabsentFluoro-GoldRatSwanson (BM2) 1998Connections of the lateral septal complexRisold PY, Swanson LW.Brain Res Brain Res Rev. 1997 Sep 19;24(2-3):197-254. Review.9385454Bota, M.Collator note: LSv does not receive projection from this region, because all of the atlas levels were inspected and no label was found.
12
6bLayer 6b, isocortexMOpPrimary motor areastrongFluoro-GoldRatSwanson (BM2) 1998Topographic organization in the corticocortical connections of medial agranular cortex in rats.Reep RL, Goodwin GS, Corwin JV.J Comp Neurol. 1990 Apr 8;294(2):262-80.2332532Bota, M.Collator note: strong labeling just above the anterior forceps. Fig. 4B, Swanson Atlas Level 9.
13
6bLayer 6b, isocortexMOpPrimary motor areamoderateFluoro-GoldRatSwanson (BM2) 1998Topographic organization in the corticocortical connections of medial agranular cortex in rats.Reep RL, Goodwin GS, Corwin JV.Brain Res. 2001 Jan 19;889(1-2):1-22.2332532Bota, M.Collator note: caudally, the 6b contains fewer labeled cells. See Fig. 4D, Swanson Atlas 12.
14
6bLayer 6b, isocortexMOsSecondary motor areamoderateFluoro-GoldRatSwanson (BM2) 1998Topographic organization in the corticocortical connections of medial agranular cortex in rats.Reep RL, Goodwin GS, Corwin JV.Exp Brain Res. 1996 Sep;111(2):215-32.2332532Bota, M.Collator note: See Fig. 3B, Swanson Atlas Levels 9-10.
15
6bLayer 6b, isocortexMOsSecondary motor areaabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.J Comp Neurol. 1998 Aug 24;398(2):179-205.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
16
6bLayer 6b, isocortexNIcNucleus incertus compact partabsentCTBRatSwanson (BM2) 1998Connections of the nucleus incertusGoto M, Swanson LW, Canteras NS.J Comp Neurol. 1992 Oct 8;324(2):143-79. Erratum in: J Comp Neurol 1993 Feb 22;328(4):604.11503154Bota, M.Collator note: NIc does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
17
6bLayer 6b, isocortexNIdNucleus incertus diffuse partabsentCTBRatSwanson (BM2) 1998Connections of the nucleus incertusGoto M, Swanson LW, Canteras NS.Brain Struct Funct. 2007 Sep;212(2):149-79. Epub 2007 Jul 27.11503154Bota, M.Collator note: NId does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
18
6bLayer 6b, isocortexORBlOrbital area lateral partweak-modretrograde tracersRatSwanson (BM2) 1998Neuronal connections of orbital cortex in the rats: topography of cortical and thalamic afferentsReep RL, Corwin JV, King V.J Comp Neurol. 1999 May 24;408(1):23-45.8891652Bota, M.Collator note: labeled neurons just above the anterior forceps. See Fig. 6A, Swanson Atlas Levels 7-8.
19
6bLayer 6b, isocortexORBlOrbital area lateral partabsentretrograde tracersRatSwanson (BM2) 1998Neuronal connections of orbital cortex in the rats: topography of cortical and thalamic afferentsReep RL, Corwin JV, King V.Front Neuroanat. 2012 May 29;6:19. doi: 10.3389/fnana.2012.00019. eCollection 2012.8891652Bota, M.Collator note: this connection is considered to be absent.
20
6bLayer 6b, isocortexORBmOrbital area medial partabsentretrograde tracersRatSwanson (BM2) 1998Neuronal connections of orbital cortex in the rats: topography of cortical and thalamic afferentsReep RL, Corwin JV, King V.Brain Res Brain Res Rev. 2001 Dec;38(1-2):192-246. Review.8891652Bota, M.Collator note: this connection is considered to be absent.
21
6bLayer 6b, isocortexORBvOrbital area ventral partabsentretrograde tracersRatSwanson (BM2) 1998Neuronal connections of orbital cortex in the rats: topography of cortical and thalamic afferentsReep RL, Corwin JV, King V.J Comp Neurol. 2005 Aug 29;489(3):349-71.8891652Bota, M.Collator note: this connection is considered to be absent.
22
6bLayer 6b, isocortexORBvlOrbital area ventrolateral partabsentretrograde tracersRatSwanson (BM2) 1998Neuronal connections of orbital cortex in the rats: topography of cortical and thalamic afferentsReep RL, Corwin JV, King V.Brain Res Bull. 1986 Sep;17(3):321-33.8891652Bota, M.Collator note: this connection is considered to be absent.
23
6bLayer 6b, isocortexPA
Posterior nucleus of the amygdala
absentFluoro-GoldRatSwanson (BM2) 1998Connections of the posterior nucleus of the amygdalaCanteras NS, Simerly RB, Swanson LW.J Comp Neurol. 1984 Jun 20;226(2):184-202.1430327Bota, M.Collator note: PA does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
24
6bLayer 6b, isocortexPERIPerirhinal areaabsentretrograde tracersRatSwanson (BM2) 1998Cortical afferents of the perirhinal, postrhinal, and entorhinal cortices of the ratBurwell RD, Amaral DG.J Comp Neurol. 1991 Jun 8;308(2):249-76.9700566Bota, M.Collator note: this connection is considered to be absent.
25
6bLayer 6b, isocortexPHPosterior hypothalamic nucleusabsentPHALRatSwanson (BM2) 1998The posterior hypothalamic area: chemoarchitecture and afferent connectionsAbrahamson EE, Moore RY.J Comp Neurol. 2000 Jul 17;423(1):83-98.11166682Bota, M.Collator note: this connection is considered to be non-existent, because all of the atlas levels were inspected
26
6bLayer 6b, isocortexPLPrelimbic areaabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.Exp Brain Res. 1991;85(2):324-34.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
27
6bLayer 6b, isocortexPMdDorsal premammillary nucleusabsentPHALRatSwanson (BM2) 1998Afferent connections of the dorsal premammillary nucleusComoli E, Ribeiro-Barbosa ER, Canteras NS.Brain Res Brain Res Rev. 1997 Sep 19;24(2-3):115-95. Review.10861538Bota, M.Collator note: PMd does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
28
6bLayer 6b, isocortexPRCPrecommissural nucleusabsentCTBRatSwanson (BM2) 1998Connections of the precommissural nucleusCanteras NS, Goto M.J Comp Neurol. 2001 Sep 10;438(1):86-122.10331578Bota, M.Collator note: PRC does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
29
6bLayer 6b, isocortexPTLp
Posterior parietal association areas
absentFluoro-GoldRatSwanson (BM2) 1998Rat posterior parietal cortex: topography of corticocortical and thalamic connectionsReep RL, Chandler HC, King V, Corwin JV.J Comp Neurol. 1990 Oct 22;300(4):593-606.7813654Bota, M.Collator note: this connection is considered to be absent.
30
6bLayer 6b, isocortexRSPagl
Retrosplenial area lateral agranular part
absentFluoro-GoldRatSwanson (BM2) 1998The structural organization of connections between hypothalamus and cerebral cortexRisold PY, Thompson RH, Swanson LW.Brain Res Rev. 2010 Sep;64(1):14-103. doi: 10.1016/j.brainresrev.2010.02.002. Epub 2010 Feb 17. Review.9385455Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
31
6bLayer 6b, isocortexVISalAnterolateral visual areaabsentWGA-HRPRatSwanson (BM2) 1998Direct connections of rat visual cortex with sensory, motor, and association cortices.Miller MW, Vogt BA.Exp Neurol. 1984 Mar;83(3):468-85.6736299Bota, M.Collator note: this connection is considered to be absent.
32
6bLayer 6b, isocortexVISamAnteromedial visual areaabsentWGA-HRPRatSwanson (BM2) 1998Direct connections of rat visual cortex with sensory, motor, and association cortices.Miller MW, Vogt BA.J Comp Neurol. 1979 Mar 1;184(1):43-62. No abstract available.6736299Bota, M.Collator note: this connection is considered to be absent.
33
6bLayer 6b, isocortexVISlmMediolateral visual areaabsentWGA-HRPRatSwanson (BM2) 1998Prosencephalic connections of striate and extrastriate areas of rat visual cortex.Sanderson KJ, Dreher B, Gayer N.Brain Res Bull. 1988 Mar;20(3):333-48.1716594Bota, M.Collator note: this connection is considered to be absent.
34
6bLayer 6b, isocortexVISpPrimary visual areaabsentWGA-HRPRatSwanson (BM2) 1998Direct connections of rat visual cortex with sensory, motor, and association cortices.Miller MW, Vogt BA.Brain Res Brain Res Rev. 2001 Dec;38(1-2):247-89. Review.6736299Bota, M.Collator note: this connection is considered to be absent.
35
AAAAnterior amygdaloid areaACAdAnterior cingulate area dorsal partabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.Brain Res. 1990 Jun 4;518(1-2):227-43.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
36
AAAAnterior amygdaloid areaAHNAnterior hypothalamic nucleusabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Neuroscience. 2002;110(3):445-58.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
37
AAAAnterior amygdaloid areaAUDpPrimary auditory areaabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Brain Res Bull. 1988 Aug;21(2):147-61.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
38
AAAAnterior amygdaloid areaAUDvVentral auditory areasabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1983 May 10;216(2):192-210.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
39
AAAAnterior amygdaloid areaBSTad
Bed nuclei of the stria terminalis anterior division anterodorsal area
existsPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Struct Funct. 2007 Sep;212(2):149-79. Epub 2007 Jul 27.11750933Swanson, L. W.moderate rostrally, light caudally
40
AAAAnterior amygdaloid areaBSTal
Bed nuclei of the stria terminalis anterolateral area
existsPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res Brain Res Rev. 1997 Sep 19;24(2-3):197-254. Review.11750933Swanson, L. W.light rostrally, moderate caudally
41
AAAAnterior amygdaloid areaBSTav
Bed nuclei of the stria terminalis anterior division anteroventral area
moderatePHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Neurosci Lett. 1979 Apr;12(1):59-64.11750933Swanson, L. W.none provided
42
AAAAnterior amygdaloid areaBSTd
Bed nuclei of the stria terminalis posterior division dorsal nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res. 1975 Jul 11;92(2):324-30. No abstract available.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
43
AAAAnterior amygdaloid areaBSTdl
Bed nuclei of the stria terminalis anterior division dorsolateral nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res Bull. 1983 Jun;10(6):775-93.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
44
AAAAnterior amygdaloid areaBSTdm
Bed nuclei of the stria terminalis anterior division dorsomedial nucleus
moderatePHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.J Hirnforsch. 1985;26(6):667-81.11750933Swanson, L. W.none provided
45
AAAAnterior amygdaloid areaBSTfu
Bed nuclei of the stria terminalis anterior division fusiform nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.J Comp Neurol. 2008 Dec 10;511(5):628-57. doi: 10.1002/cne.21870.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
46
AAAAnterior amygdaloid areaBSTif
Bed nuclei of the stria terminalis posterior division interfascicular nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Neurosci Lett. 1983 May 27;37(1):29-35.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
47
AAAAnterior amygdaloid areaBSTju
Bed nuclei of the stria terminalis juxtacapsular nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res Bull. 1987 Aug;19(2):203-21.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
48
AAAAnterior amygdaloid areaBSTmg
Bed nuclei of the stria terminalis anterior division magnocellular nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res Rev. 2010 Sep;64(1):14-103. doi: 10.1016/j.brainresrev.2010.02.002. Epub 2010 Feb 17. Review.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
49
AAAAnterior amygdaloid areaBSTov
Bed nuclei of the stria terminalis oval nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.J Neurosci. 1983 Jan;3(1):189-202.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
50
AAAAnterior amygdaloid areaBSTpr
Bed nuclei of the stria terminalis posterior division principal nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res Brain Res Rev. 1997 Sep 19;24(2-3):115-95. Review.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
51
AAAAnterior amygdaloid areaBSTrh
Bed nuclei of the stria terminalis rhomboid nucleus
moderatePHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Neurosci Res. 1991 Oct;12(1):83-100.11750933Swanson, L. W.none provided
52
AAAAnterior amygdaloid areaBSTsc
Bed nuclei of the stria terminalis, anterior division, subcommisural zone
moderatePHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.J Comp Neurol. 1992 Jul 8;321(2):277-99.11750933Swanson, L. W.none provided
53
AAAAnterior amygdaloid areaBSTtr
Bed nuclei of the stria terminalis posterior division transverse nucleus
existsPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res Brain Res Rev. 2003 Mar;41(2-3):153-202. Review.11750933Swanson, L. W.moderate laterally
54
AAAAnterior amygdaloid areaBSTv
Bed nuclei of the stria terminalis anterior division ventral nucleus
absentPHALRatSwanson (BM2) 1998Topography of projections from amygdala to bed nuclei of the stria terminalisDong HW, Petrovich GD, Swanson LW.Brain Res Brain Res Rev. 1997 Sep 19;24(2-3):197-254. Review.11750933Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
55
AAAAnterior amygdaloid areaCA1Field CA1weakPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1995 Feb 20;352(4):567-93.11750934Swanson, L. W.light; ventral two-thirds/zones 2,3 mostly
56
AAAAnterior amygdaloid areaCA1Field CA1absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Exp Brain Res. 1991;85(2):324-34.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
57
AAAAnterior amygdaloid areaCA2Field CA2absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1983 May 10;216(2):192-210.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
58
AAAAnterior amygdaloid areaCA3Field CA3absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 2008 Jan 1;506(1):30-45.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
59
AAAAnterior amygdaloid areaCA3Field CA3absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Brain Res Bull. 1988 Aug;21(2):147-61.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
60
AAAAnterior amygdaloid areaCA3Field CA3absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1986 Apr 15;246(3):312-42.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
61
AAAAnterior amygdaloid areaDGDentate gyrusabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1983 Oct 20;220(2):168-90.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
62
AAAAnterior amygdaloid areaECTEctorhinal areaabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1995 Feb 20;352(4):567-93.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
63
AAAAnterior amygdaloid areaENTlEntorhinal area, lateral partweakPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Exp Brain Res. 1983;50(2-3):275-82.11750934Swanson, L. W.light; throughout dorsoventral axis
64
AAAAnterior amygdaloid areaENTlEntorhinal area, lateral partweakFluoro-GoldRatSwanson (BM2) 1998Afferent connections of the amygdalopiriform transition area in the ratSantiago AC, Shammah-Lagnado SJ.Hippocampus. 2007;17(10):957-76.16025448Bota, M.Collator note: data extracted from Table 1, page 356.
65
AAAAnterior amygdaloid areaENTlEntorhinal area, lateral partweakFluoro-GoldRatSwanson (BM2) 1998Afferent connections of the amygdalopiriform transition area in the ratSantiago AC, Shammah-Lagnado SJ.Behav Brain Res. 1987 Feb;23(2):127-45.16025448Bota, M.Collator note: data extracted from Table 1, page 356.
66
AAAAnterior amygdaloid areaENTlEntorhinal area, lateral partabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 2008 Jan 1;506(1):30-45.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
67
AAAAnterior amygdaloid areaENTm
Entorhinal area medial part, dorsal zone
v.weakPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 2008 Jan 1;506(1):30-45.11750934Swanson, L. W.in ENTm1; very light; throughout dorsoventral axis, except perhaps dorsal tip
68
AAAAnterior amygdaloid areaENTm
Entorhinal area medial part, dorsal zone
absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Brain Res Brain Res Rev. 1997 Sep 19;24(2-3):197-254. Review.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
69
AAAAnterior amygdaloid areaENTMv
Entorhinal area medial part, ventral zone
absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Chem Neuroanat. 1998 Aug;15(2):97-109.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
70
AAAAnterior amygdaloid areaENTMv
Entorhinal area medial part, ventral zone
absentFluoro-GoldRatSwanson (BM2) 1998Afferent connections of the amygdalopiriform transition area in the ratSantiago AC, Shammah-Lagnado SJ.J Hirnforsch. 1983;24(3):329-39.16025448Bota, M.Collator note: data extracted from Table 1, page 356.
71
AAAAnterior amygdaloid areaILAInfralimbic areamoderateWGA-HRPRatSwanson (BM2) 1998Topography of projections from the medial prefrontal cortex to the amygdala of the rat.Cassell MD, Wright DJ.Exp Brain Res. 1987;68(2):355-64.2429740Bota, M.Retrogradely labeled neurons were present in the medial part of BLNp and the anterior amygdaloid area (AAA) (Fig. 5 A-D). Collator note: label in the caudal AAA, and some neurons in the COAa. See Fig 5A, Swanson Atlas Levels 22-23.
72
AAAAnterior amygdaloid areaILAInfralimbic areaabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.Brain Res Bull. 1990 Mar;24(3):341-54.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
73
AAAAnterior amygdaloid areaLHALateral hypothalamic areaexistsPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Brain Res Brain Res Rev. 2003 Mar;41(2-3):153-202. Review.11750934Swanson, L. W.moderately in dorsolateral region at level of the DMHa, atlas level 29
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AAAAnterior amygdaloid areaLHALateral hypothalamic areaexistsPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Brain Res Brain Res Rev. 1998 Jul;27(2):89-118. Review.11750934Swanson, L. W.moderately dense in region of the parasubthalamic nucleus, atlas level 33
75
AAAAnterior amygdaloid areaLHAjp
Lateral hypothalamic area juxtaparaventricular region
absentCTBRatSwanson (BM3) 2004Distinct patterns of neuronal inputs and outputs of the juxtaparaventricular and suprafornical regions of the lateral hypothalamic area in the male ratHahn JD, Swanson LW.Brain Res Rev. 2010 Sep;64(1):14-103. doi: 10.1016/j.brainresrev.2010.02.002. Epub 2010 Feb 17. Review.20170674Bota, M.Collator note: data directly collated from the associated paper See Table 1, pages 50-52.
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AAAAnterior amygdaloid areaLHAjp
Lateral hypothalamic area juxtaparaventricular region
absentCTBRatSwanson (BM3) 2004Distinct patterns of neuronal inputs and outputs of the juxtaparaventricular and suprafornical regions of the lateral hypothalamic area in the male ratHahn JD, Swanson LW.J Comp Neurol. 1988 Apr 8;270(2):209-42.20170674Bota, M.Collator note: data directly collated from the associated paper See Table 1, pages 50-52.
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AAAAnterior amygdaloid areaLHAs
Lateral hypothalamic area suprafornical region
weakCTBRatSwanson (BM3) 2004Distinct patterns of neuronal inputs and outputs of the juxtaparaventricular and suprafornical regions of the lateral hypothalamic area in the male ratHahn JD, Swanson LW.Brain Res Brain Res Rev. 2003 Mar;41(2-3):153-202. Review.20170674Bota, M.Collator note: data directly collated from the associated paper See Table 1, pages 50-52.
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AAAAnterior amygdaloid areaLSvLateral septal nucleus ventral partabsentFluoro-GoldRatSwanson (BM2) 1998Connections of the lateral septal complexRisold PY, Swanson LW.J Comp Neurol. 1993 Apr 22;330(4):533-42.9385454Bota, M.Collator note: LSv does not receive projection from this region, because all of the atlas levels were inspected and no label was found.
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AAAAnterior amygdaloid areaMEAMedial nucleus of the amygdalaweakPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Proc Natl Acad Sci U S A. 1995 Apr 25;92(9):3898-902.11750934Swanson, L. W.in MEAmv...
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AAAAnterior amygdaloid areaMMMedial mammillary nucleusabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Chem Neuroanat. 1998 Aug;15(2):97-109.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
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AAAAnterior amygdaloid areaMOBMain olfactory bulbweak-modFluoro-GoldRatSwanson (BM2) 1998Centrifugal telencephalic afferent connections to the main and accessory olfactory bulbsMohedano-Moriano A, de la Rosa-Prieto C, Saiz-Sanchez D, Ubeda-Bañon I, Pro-Sistiaga P, de Moya-Pinilla M, Martinez-Marcos A.J Comp Neurol. 1991 Jun 15;308(3):432-56.22661931Bota, M.a number of retrogradely labeled cells were observed in […] anterior amygdaloid area […]. Collator note: difficult to identify the topographical position of the labeled neurons.
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AAAAnterior amygdaloid areaMOsSecondary motor areaabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.J Comp Neurol. 1986 Dec 8;254(2):143-65.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
83
AAAAnterior amygdaloid areaMPNl
Medial preoptic nucleus lateral part
absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1983 Jul 10;217(4):390-404.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
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AAAAnterior amygdaloid areaMPOMedial preoptic areaabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Neurosci Lett. 1988 May 26;88(2):121-6.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
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AAAAnterior amygdaloid areaNIcNucleus incertus compact partabsentCTBRatSwanson (BM2) 1998Connections of the nucleus incertusGoto M, Swanson LW, Canteras NS.J Comp Neurol. 1987 Nov 8;265(2):175-88. Review.11503154Bota, M.Collator note: NIc does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
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AAAAnterior amygdaloid areaNIdNucleus incertus diffuse partabsentCTBRatSwanson (BM2) 1998Connections of the nucleus incertusGoto M, Swanson LW, Canteras NS.J Comp Neurol. 1992 Sep 1;323(1):117-27.11503154Bota, M.Collator note: NId does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
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AAAAnterior amygdaloid areaPA
Posterior nucleus of the amygdala
weakFluoro-GoldRatSwanson (BM2) 1998Connections of the posterior nucleus of the amygdalaCanteras NS, Simerly RB, Swanson LW.Neuroscience. 2005;133(1):193-207. Erratum in: Neuroscience. 2005;135(3):1011.1430327Bota, M.Several retrogradely labeled neurons, which very often displayed intense labeling, were found in lateral parts of the substantia innominata, in the anterior amygdaloid area (AAA), and in rostral parts of the medial division of the central nucleus of the amygdala (Fig. 4B-F). Despite the fact that these labeled cells were located in different areas, their morphology was very similar; most were medium-sized stellate or fusiform neurons. Collator note: Swanson Atlas Levels 21-26.
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AAAAnterior amygdaloid areaPA
Posterior nucleus of the amygdala
existsFluorogold/PHALRatSwanson (BM2) 1998Connections of the posterior nucleus of the amygdalaCanteras NS, Simerly RB, Swanson LW.J Comp Neurol. 1988 Apr 8;270(2):209-42.1430327Swanson, L. W.rostrally
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AAAAnterior amygdaloid areaPARParasubiculumabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Neuroscience. 1982 Jan;7(1):133-59.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
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AAAAnterior amygdaloid areaPERIPerirhinal areaweakPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Neurosci Res. 1988 Oct;6(1):31-44.11750934Swanson, L. W.N/A
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AAAAnterior amygdaloid areaPHPosterior hypothalamic nucleusweakPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Brain Res. 1989 Dec 29;505(2):337-40.11750934Swanson, L. W.N/A
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AAAAnterior amygdaloid areaPLPrelimbic areaabsentFluoro-GoldRatSwanson (BM2) 1998Anatomical analysis of afferent projections to the medial prefrontal cortex in the ratHoover WB, Vertes RP.Neirofiziologiia. 1986;18(4):469-75. Russian.17717690Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
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AAAAnterior amygdaloid areaPMdDorsal premammillary nucleusabsentPHALRatSwanson (BM2) 1998Afferent connections of the dorsal premammillary nucleusComoli E, Ribeiro-Barbosa ER, Canteras NS.J Comp Neurol. 1993 Nov 15;337(3):431-45.10861538Bota, M.Collator note: PMd does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
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AAAAnterior amygdaloid areaPRCPrecommissural nucleusabsentCTBRatSwanson (BM2) 1998Connections of the precommissural nucleusCanteras NS, Goto M.J Comp Neurol. 1983 Oct 20;220(2):168-90.10331578Bota, M.Collator note: PRC does not receive projections from this region, because all of the atlas levels were inspected and no label was found.
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AAAAnterior amygdaloid areaPREPresubiculumabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Neurosci Res. 2004 May;49(1):1-11.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
96
AAAAnterior amygdaloid areaPTLp
Posterior parietal association areas
absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Hippocampus. 2007;17(10):957-76.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
97
AAAAnterior amygdaloid areaPVa
Anterior periventricular nucleus of the hypothalamus
absentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Brain Res. 1986 Jul 9;377(2):261-70.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.
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AAAAnterior amygdaloid areaPVHd
Paraventricular nucleus of the hypothalamus, descending division
weakPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.J Comp Neurol. 1987 Nov 8;265(2):189-202. Review.11750934Swanson, L. W.N/A
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AAAAnterior amygdaloid areaRSPagl
Retrosplenial area lateral agranular part
absentFluoro-GoldRatSwanson (BM2) 1998The structural organization of connections between hypothalamus and cerebral cortexRisold PY, Thompson RH, Swanson LW.Acta Univ Carol Med (Praha). 1983;29(5-6):283-304. No abstract available.9385455Bota, M.Collator note: this connection is considered to be absent, because all of the atlas levels were inspected by authors and collators.
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AAAAnterior amygdaloid areaRSPdRetrosplenial area dorsal partabsentPHALRatSwanson (BM2) 1998Combinatorial amygdalar inputs to hippocampal domains and hypothalamic behavior systemsPetrovich GD, Canteras NS, Swanson LW.Ann N Y Acad Sci. 1999 Jun 29;877:309-38. Review.11750934Swanson, L. W.This projection is considered to be nonexistent since the identification of fiber tracts was performed across all atlas levels.