CLOSED Ticket-2134- Review annotations to GO:0033212 iron import into cell and children

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R
1	Suggested action (by annotation review requester)	COMMENT (FIXED /OK) - by Contributor	Git handle of repondent	Gene/gene product (bioentity)	Gene product name	Annotation qualifier	GO class direct	Annotation extension	Contributor (Assigned by)	Organism (Taxon ID )	Evidence	Evidence with	Panther family	Isoform	Reference	Date	term label	Pascale - comment

2	move down to GO:0033214 siderophore-dependent iron import into cell	Changed	marekskrzypek	AspGD:ASPL0000102785			GO:0033212		AspGD	NCBITaxon:746128	IMP				AspGD_REF:ASPL0000111254\|PMID:17845073	20100929	iron import into cell	siderophore
3	move down to GO:0033214 siderophore-dependent iron import into cell	Changed	marekskrzypek	AspGD:ASPL0000102785			GO:0033212		AspGD	NCBITaxon:746128	IMP				AspGD_REF:ASPL0000113089\|PMID:19376908	20130114	iron import into cell	siderophore
4	REMOVE and add GO:0036086 positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation	Removed	marekskrzypek	AspGD:ASPL0000103406			GO:0033212		AspGD	NCBITaxon:746128	IMP				AspGD_REF:ASPL0000432269\|PMID:25534941	20150123	iron import into cell	transcription factor
5	move down to GO:0033214 siderophore-dependent iron import into cell	Changed	marekskrzypek	AspGD:ASPL0000103489			GO:0033212		AspGD	NCBITaxon:746128	IMP				AspGD_REF:ASPL0000111254\|PMID:17845073	20100929	iron import into cell	siderophore
6	move down to GO:0033214 siderophore-dependent iron import into cell	Changed	marekskrzypek	AspGD:ASPL0000103489			GO:0033212		AspGD	NCBITaxon:746128	IMP				AspGD_REF:ASPL0000113089\|PMID:19376908	20130114	iron import into cell	siderophore
7	REMOVE and add GO:0036086 positive regulation of transcription from RNA polymerase II promoter in response to iron ion starvation	Changed	marekskrzypek	AspGD:ASPL0000103947			GO:0033212		AspGD	NCBITaxon:746128	IMP				AspGD_REF:ASPL0000117840\|PMID:21062375	20110104	iron import into cell	transcription factor
8	move down to GO:0033214 siderophore-dependent iron import into cell	Changed	marekskrzypek	AspGD:ASPL0000104885			GO:0033212		AspGD	NCBITaxon:746128	IMP				AspGD_REF:ASPL0000111122\|PMID:17586718	20111101	iron import into cell	siderophore hydrolysis
9	TO REVIEW - not consistent with other annotations	Checked (and unchanged)	marekskrzypek	CGD:CAL0000183666			GO:0033215		CGD	NCBITaxon:5476	IMP				CGD_REF:CAL0121072\|PMID:19023418	20140625	reductive iron assimilation
10	move to GO:0006357 regulation of transcription by RNA polymerase II - iron response not shown	Removed	marekskrzypek	CGD:CAL0000185267			GO:0033212		CGD	NCBITaxon:5476	IMP				CGD_REF:CAL0124764\|PMID:20041210	20140625	iron import into cell	transcription factor
11	move to GO:0006357 regulation of transcription by RNA polymerase II - iron response not shown	Changed	marekskrzypek	CGD:CAL0000188166			GO:0033212		CGD	NCBITaxon:5476	IMP		PANTHER:PTHR28088		CGD_REF:CAL0124764\|PMID:20041210	20140625	iron import into cell	transcription factor
12	move to GO:0006357 regulation of transcription by RNA polymerase II - iron response not shown	Removed	marekskrzypek	CGD:CAL0000188360			GO:0033212		CGD	NCBITaxon:5476	IMP				CGD_REF:CAL0124764\|PMID:20041210	20140625	iron import into cell	transcription factor
13	move to GO:0006357 regulation of transcription by RNA polymerase II - iron response not shown	Removed	marekskrzypek	CGD:CAL0000189760			GO:0033212		CGD	NCBITaxon:5476	IMP		PANTHER:PTHR31845		CGD_REF:CAL0124764\|PMID:20041210	20140625	iron import into cell	transcription factor
19	iron sensing ? - needs review, see https://www.ncbi.nlm.nih.gov/pubmed/19058322	Changed	ukemi	MGI:MGI:109191	hemochromatosis		GO:0098711		MGI	NCBITaxon:10090	IMP	MGI:MGI:2181388	PANTHER:PTHR16675		MGI:MGI:1332955\|PMID:10077651	20170331	iron ion import across plasma membrane
21	REMOVE - not reductive transport	Removed		PomBase:SPAC1F7.07c	plasma membrane iron permease Fip1		GO:0033215		PomBase	NCBITaxon:4896	IGI	PomBase:SPAC1F7.08	PANTHER:PTHR31632		PMID:8995275	20170918	reductive iron assimilation
22	reductive iron assimilation would be more precise	Removed		PomBase:SPAC1F7.08	plasma membrane iron transport multicopper oxidase Fio1		GO:0098711		PomBase	NCBITaxon:4896	IMP		PANTHER:PTHR11709		PMID:8995275	20170918	iron ion import across plasma membrane
26	REMOVE - not reductive transport	Removed	srengel	SGD:S000000947	High affinity iron permease		GO:0033215		SGD	NCBITaxon:559292	IMP		PANTHER:PTHR31632		PMID:16700543\|SGD_REF:S000115807	20070802	reductive iron assimilation
28	REMOVE - has other annotations to transcription factor			UniProtKB:A0A1D8PF19	Hap43p		GO:0033212		CGD	NCBITaxon:237561	IMP				PMID:20041210	20140625	iron import into cell
29	REMOVE - transcription factor has other annotations to transcription factor			UniProtKB:A0A1D8PM73	Csr1p		GO:0033212		CGD	NCBITaxon:237561	IMP		PANTHER:PTHR19818		PMID:20041210	20140625	iron import into cell
30	REMOVE - should be siderophore biosynthesis			UniProtKB:E9QYP0	L-ornithine N(5)-monooxygenase		GO:0033212		AspGD	NCBITaxon:330879	IMP		PANTHER:PTHR42802		PMID:17845073	20100929	iron import into cell
31	REMOVE - should be siderophore biosynthesis			UniProtKB:E9QYP0	L-ornithine N(5)-monooxygenase		GO:0033212		AspGD	NCBITaxon:330879	IMP		PANTHER:PTHR42802		PMID:19376908	20130114	iron import into cell
33	REMOVE - should be siderophore biosynthesis	Changed	sandyl27	UniProtKB:P0AE08			GO:0033214		CACAO	NCBITaxon:83333	IMP		PANTHER:PTHR10681		PMID:23042987	20121104	siderophore-dependent iron import into cell
34	this subunit's role has not been defined - remove	Removed	keseler	UniProtKB:P0AEL3			GO:0098711		EcoCyc	NCBITaxon:83333	IMP				PMID:8407793	20161115	iron ion import across plasma membrane
35	unknown role - remove	Changed	keseler	UniProtKB:P17315	ferric dihyroxybenzoylserine outer membrane transporter		GO:0033212		EcoCyc	NCBITaxon:83333	IEP				PMID:141448	20100224	iron import into cell
36	move down to GO:0033214 siderophore-dependent iron import into cell	Changed	keseler	UniProtKB:P39405	hydroxamate siderophore iron reductase		GO:0033212		EcoCyc	NCBITaxon:83333	IDA				PMID:14756576	20131209	iron import into cell
37	move down to GO:0033214 siderophore-dependent iron import into cell	Changed	keseler	UniProtKB:P39405	hydroxamate siderophore iron reductase		GO:0033212		EcoCyc	NCBITaxon:83333	IMP				PMID:9990318	20120709	iron import into cell
38	REMOVE - transcription factor has other annotations to transcription factor	Removed	ggeorghiou	UniProtKB:P9WMH1	Iron-dependent repressor IdeR		GO:0033212		UniProt	NCBITaxon:83332	IMP		PANTHER:PTHR33238		PMID:12065475	20180605	iron import into cell
39	TO REVIEW - excretion system - excretes siderophores ?????	Checked (and unchanged)	ggeorghiou	UniProtKB:P9WPI3	ESX-3 secretion system protein EccA3		GO:0033214		MTBBASE	NCBITaxon:83332	IMP		PANTHER:PTHR43392		PMID:19846780	20100527	siderophore-dependent iron import into cell
40	Disputed in P2GO Nov 26 2018			UniProtKB:Q13492	Phosphatidylinositol-binding clathrin assembly protein		GO:0098711		Alzheimers_University_of_Toronto	NCBITaxon:9606	IMP		PANTHER:PTHR22951		PMID:22952941	20140411	iron ion import across plasma membrane
41	iron sensing ? - needs review, see https://www.ncbi.nlm.nih.gov/pubmed/19058322	Changed	ggeorghiou	UniProtKB:Q30201	Hereditary hemochromatosis protein		GO:0098711		UniProt	NCBITaxon:9606	IDA		PANTHER:PTHR16675		PMID:10085150	20130308	iron ion import across plasma membrane
42	move down to reductive iron assimilation	Changed	keseler	UniProtKB:Q46871	NADPH-dependent ferric chelate reductase		GO:0033212		EcoCyc	NCBITaxon:83333	IMP		PANTHER:PTHR30157		PMID:22098718	20111130	iron import into cell
43	move down to GO:0033214 siderophore-dependent iron import into cell			UniProtKB:Q4WF29	Siderophore triacetylfusarinine C esterase		GO:0033212		AspGD	NCBITaxon:330879	IMP		PANTHER:PTHR40841		PMID:17586718	20111101	iron import into cell
44	REMOVE - should be siderophore biosynthesis			UniProtKB:Q4WR82	Nonribosomal peptide synthetase sidC		GO:0033212		AspGD	NCBITaxon:330879	IMP		PANTHER:PTHR45527		PMID:17845073	20100929	iron import into cell
45	REMOVE - should be siderophore biosynthesis			UniProtKB:Q4WR82	Nonribosomal peptide synthetase sidC		GO:0033212		AspGD	NCBITaxon:330879	IMP		PANTHER:PTHR45527		PMID:19376908	20130114	iron import into cell
46
47	DUPLICATE CANDIDA annotations
48	TO REVIEW - not consistent with other annotations			UniProtKB:Q59L12	Agglutinin-like protein 3		GO:0033215		CGD	NCBITaxon:237561	IMP		PANTHER:PTHR33793		PMID:19023418	20140625	reductive iron assimilation	from hemoglobin
49	from hemoglobin - create new function: haemophore activity ? https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-2958.2012.08136.x			UniProtKB:Q59UT5	Predicted GPI-anchored protein 7		GO:0033212		CGD	NCBITaxon:237561	IMP		PANTHER:PTHR35607		PMID:25275454	20150126	iron import into cell	incorrectly in AmiGO - probably via GOA-others
50	move to GO:0006357 regulation of transcription by RNA polymerase II - iron response not sown			UniProtKB:Q59UY7	Transcriptional regulatory protein SEF1		GO:0033212		CGD	NCBITaxon:237561	IMP		PANTHER:PTHR31845		PMID:20041210	20140625	iron import into cell	incorrectly in AmiGO - probably via GOA-others
51	from hemoglobin - create new function: haemophore activity ? https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-2958.2012.08136.x			UniProtKB:Q5A0X8	Surface antigen protein 2		GO:0033212		CGD	NCBITaxon:237561	IMP		PANTHER:PTHR35607		PMID:24796871	20140625	iron import into cell	incorrectly in AmiGO - probably via GOA-others
52	move to GO:0006357 regulation of transcription by RNA polymerase II - iron response not sown			UniProtKB:Q5AFK0	Metal-binding activator 1		GO:0033212		CGD	NCBITaxon:237561	IMP		PANTHER:PTHR28088		PMID:20041210	20140625	iron import into cell	incorrectly in AmiGO - probably via GOA-others
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