| A | B | C | D | E | F | G | H | ||
|---|---|---|---|---|---|---|---|---|---|
1 | Title | Author | URL | Live/Recorded/Static | StartDate | EndDate | Contact Person for Oxford study group | ||
2 | Data Mngt | Digital Preservation Handbook | DPC | https://www.dpconline.org/handbook | book | ||||
3 | Data Mngt | FAIR data managment | FAIRsFAIR | https://zoom.us/webinar/register/WN_P3f8bLcnQwaASsafzKT-vA | Live | 2020-0-08 3PM CEST | 2020-0-08 4PM CEST | ||
4 | Data Mngt | Best Practices for Biomedical Research Data Management | Elaine Martin & Julie Goldman (Harvard) | https://www.canvas.net/browse/harvard-medical/courses/biomed-research-data-mgmt | MOOC (recorded, live study groups) | Ongoing | |||
5 | Data Mngt | Data Managment induction resources | University of Oxford | http://damaro.oucs.ox.ac.uk/induction.xml | static | ||||
6 | Data Mngt | Research Data Oxford site | University of Oxford | http://researchdata.ox.ac.uk/ | static | ||||
7 | Data Simulation - R | Beginner’s Guide to Simulating Data | Elizabeth Page-Gould | http://www.page-gould.com/simulation/Guide-to-Simulation-for-R.html | Static | ||||
8 | Data Simulation - SPSS | Beginner’s Guide to Simulating Data | Elizabeth Page-Gould | http://www.page-gould.com/simulation/Guide-to-Simulation-for-SPSS.html | Static | ||||
9 | Data visualization | Fundamental of data visualization | Claus O. Wilke | https://serialmentor.com/dataviz/ | static | ||||
10 | Data visualization in ggplot2 R | Data Visualization: A practical introduction | Kieran Healy | https://socviz.co/ | Book | ||||
11 | Experimental Design | Experimental Design Assistant for animal research | NC3Rs | https://www.nc3rs.org.uk/experimental-design-assistant-eda | online tools | ||||
12 | Git | Introduction to Git(Hub) | Ana Martinovici | https://twitter.com/OSCRotterdam/status/1248248126370004993 | Live | April 29th 2020 h.10:00 CEST | |||
13 | Git | Learning Git with GitKraken for use with GitHub, GitLab, Bitbucket and Azure DevOps | GitKraken | https://www.gitkraken.com/resources/learn-git?utm_campaign=Learn%20Git%20with%20GitKraken&utm_medium=email&_hsenc=p2ANqtz-8g7GQ9iS2XSOm_fvuUVFgfgxOgNh9vEJLprO2qtdCULPF7NqWJZsrQrw-dnVERX6xkqDtzGWZI-0GceJsfFrrhTaHmfQ&_hsmi=85892999&utm_source=hs_email&utm_content=85734388&hsCtaTracking=b5b92b82-1424-485a-b74d-ec5e043c6425%7C99d00f4c-8345-4ca6-b990-0b3cc79bd080 | recorded | ||||
14 | git, Unix/Linux, and RStudio | Data Science: Productivity Tools | Harvard University | https://online-learning.harvard.edu/course/data-science-productivity-tools?delta=0 | Recorded | ||||
15 | GitHub | GitHub learning Lab | GitHub community | https://lab.github.com/ | online courses | ||||
16 | GitLab | GitLab training | Gitlab | https://about.gitlab.com/training/ | online courses | ||||
17 | Integrity | Research Integrity and Ethics | University of Oxford | https://researchsupport.admin.ox.ac.uk/support/training/ethics#tab-268861 | static | ||||
18 | Integrity | Epigeum, Research integrity training | University of Oxford | https://www.epigeum.com/courses/research/research-integrity/ | static | ||||
19 | Metascience | Philosophical Psychology | Paul Meehl | http://meehl.umn.edu/talks/philosophical-psychology-1989 | static | ||||
20 | Misc. | list of Springer Link free book during covid19 crisis | Springer Link | https://link.springer.com/search/page/1?facet-content-type=%22Book%22&package=mat-covid19_textbooks&facet-language=%22En%22&sortOrder=newestFirst&showAll=true | Books | ||||
21 | Mplus | Introduction to Mplus | UCLA | https://idre.ucla.edu/calendar-event/introduction-to-mplus-2 | Live | May 4, 2020 @ 1:00 pm - 4:00 pm california time | |||
22 | Open Data | Detection of Open data in biomedical publications | Nico Riedel from QUEST Berlin | https://www.bihealth.org/en/notices/helmholtz-open-science-webinar-oddpub-detection-of-open-data-in-biomedical-publications/ | Live | 3 April 2020, 11 to 11.30 am CEST & 27 April 2020, 3 to 3.30 pm CEST | |||
23 | Open Eductation | Framework for Open and Reproducible Research Training resources | FORRT | https://forrt.org/resources/ | List of resources; Glossary; Lesson Plans; OS Syllabus; Summaries of OS research, etc. | ||||
24 | Open Research | Open Science, Open Data, Open Source | Fernades, Vos | https://pfern.github.io/OSODOS/gitbook/ | book | ||||
25 | Open Research | UKRN Advanced Methods Workshop materials | Several UKRN enthusiasts | https://osf.io/gupxv/ | january course material | ||||
26 | Open Research | Open Science: Sharing Your Research with the World | TUDelft | https://www.edx.org/course/open-science-sharing-your-research-with-the-world | MOOC (recorded, live study groups) | Ongoing | |||
27 | Open Research | Innovating with Open Knowledge | Edinburgh | https://openinnovation.is.ed.ac.uk/ | online | ||||
28 | Open Research | REproDucible ComputAtional Research | TUDelft | https://humtechlab.gitbook.io/redcar/ | static workshops | ||||
29 | Open Research | Principles, Statistical and Computational Tools for Reproducible Science | Harvard University | https://online-learning.harvard.edu/course/principles-statistical-and-computational-tools-reproducible-science?delta=0 | Recorded | ||||
30 | Open Research | Open Science Workshop Materials of the LMU Open Science Center | LMU Open Science Center | https://osf.io/zjrhu/ | Static | ||||
31 | Open Research | COS Reproducible Research Training | Center for Open Science | https://osf.io/adkj4/ | Recorded | ||||
32 | Open Research | Open Science and Replication Crisis | Gilad Feldman | http://mgto.org/open-science/ | List of resources | ||||
33 | Open Research | Open research in neuroimaging tutorials and resources | https://learn-neuroimaging.github.io/tutorials-and-resources/ | List of resources | |||||
34 | Open Research | The Turing Way is a lightly opinionated guide to reproducible data science | Turing Institute | https://the-turing-way.netlify.app/introduction/introduction | Dynamic book | ||||
35 | Open Research | Open Science list of resources of the LMU Open Science Center | LMU Open Science Center | https://www.osc.uni-muenchen.de/toolbox/index.html | list of resources | ||||
36 | Open Research | Why Open research? | http://whyopenresearch.org/ | list of resources | |||||
37 | Open Research | SSHOC Training Toolkit in Open Research | Social Sciences and Humanities Open Cloud | https://training-toolkit.sshopencloud.eu/ | list > 100 resources | ||||
38 | Open Research | Open Science Training Book | collaborative | https://open-science-training-handbook.gitbook.io/book/ | e-book | ||||
39 | Open Research | Open Science training toolkit | FOSTER | https://www.fosteropenscience.eu/ | list of resources | ||||
40 | Open Research | Open Science Manual | Benjamin Le | https://docs.google.com/document/d/1oMkTCEFtOq_DB0eoNiyk-B5QCgL6sVSF5pVvD1ONZDc/edit#heading=h.jqg22zxoq67a | ebook | ||||
41 | Open Research | Teaching replicable and reproducible science | SISP 2018 | https://osf.io/x7d45/ | static | ||||
42 | Open Research | re:produce Brisbane 2019 | re:produce workshop instructors | https://osf.io/mw6d3/ | static | ||||
43 | Open Research | Open Science MOOC | Open Science MOOC team | https://opensciencemooc.eu/ | Online courses and resources | ||||
44 | Open Source | Forge Your Future with Open Source | VM (Vicky) Brasseu | https://pragprog.com/book/vbopens/forge-your-future-with-open-source/ | ebook | ||||
45 | PCIbex | Webinar: Introduction to PCIbex for Online Experiments | Jeremy Zehr & Florian Schwarz | https://sasupenn.zoom.us/j/302473588 | recorded here: https://www.pcibex.net/documentation/ | ||||
46 | Peer review | How to peer review | Publon | https://publons.com/community/academy/course-overview | online course | ||||
47 | Peer review | The meta research reading list for peer reviewers | QUEST | https://www.bihealth.org/en/research/quest-center/mission-approaches/meta-research/meta-research-reading-list/ | static | ||||
48 | Poster | Better poster materials | Mike Morrison | https://osf.io/ef53g/ | online | ||||
49 | Preregistration/Registered Report | Preregistration/Registered Report why, evidence, how | Sarahanne Miranda Field | https://osf.io/u4vqx/ | static | ||||
50 | Programming | Introduction to Computer Science | Harvard University | https://online-learning.harvard.edu/course/cs50-introduction-computer-science?delta=0 | Recorded | ||||
51 | Programming | Computing Skills for Biologists: A Toolbox | Stefano Allesina & Madlen Wilmes | https://computingskillsforbiologists.com/ | book + website | Malika - rrox slack | |||
52 | Programming | Free and Open source Software Developers' European Meeting | FOSDEM | https://fosdem.org/2020/schedule/tracks/ | conference material | Thibault, Rowan, Malika - rrox slack | |||
53 | Programming | list of 25 Free Books To Learn Linux For Free | Abhishek Prakash | https://itsfoss.com/learn-linux-for-free/ | ebooks + recording | ||||
54 | Programming | Programming workshops | CodeBar | https://codebar.io/ | Live | Ongoing | |||
55 | Programming | Compilation of Free Linux training courses | Abhishek Prakash | https://itsfoss.com/free-linux-training-courses/ | online courses | ||||
56 | Programming | The Missing Semester of Your Computer Science Education | MIT | https://missing.csail.mit.edu/ | recorded | Thibault, Rowan, Malika - rrox slack | |||
57 | Programming | List of fantastic OA books on programming/data science/data viz/R, etc. | Various artists | https://bookdown.org/ | static | ||||
58 | Programming | How to teach online carpentry workshops | Software carpentry community | https://carpentries.org/blog/2020/03/tips-for-teaching-online/ | Static | ||||
59 | Programming | Learn to code for data analysis (Python, Jupyter Notebook) | OpenLearn | https://www.open.edu/openlearn/science-maths-technology/learn-code-data-analysis/content-section-overview-0?active-tab=description-tab | |||||
60 | Python | Using Python for Research | Harvard University | https://online-learning.harvard.edu/course/using-python-research?delta=0 | Recorded | ||||
61 | Python | Python 3 | Code academy | https://www.codecademy.com/learn/learn-python-3 | online course | ||||
62 | R | Open Online Introduction to R Course | Wolfgang Viechtbauer | http://www.wvbauer.com/doku.php/course_oor | Live | 2020-04-22 17:00:00 CEST | 2020-04-24 22:00:00 CEST | ||
63 | R | R Data Management | UCLA | https://idre.ucla.edu/calendar-event/r-data-management | Live | Monday, May 11 from 1 to 4 p.m. california time | |||
64 | R | R programming | Johns Hopkins University | https://www.coursera.org/learn/r-programming | online course | ||||
65 | R | R course in SEM | Sacha Epskamp, UvA | https://www.youtube.com/channel/UCMeLz8qEk77g7kBCHW23oNQ | recorded | ||||
66 | R | Robust Tool - Data Science in R | Danielle Navarro | https://djnavarro.github.io/robust-tools/ | recorded youtube + slides | ||||
67 | R | R for DataScience | Garrett Grolemund/ Hadley Wickham | https://r4ds.had.co.nz/ | static | ||||
68 | R | RStudio’s Beginners’ Site | R Studio community | https://education.rstudio.com/learn/beginner/ | static | ||||
69 | R | Data Science: R Basics | Harvard University | https://online-learning.harvard.edu/course/data-science-r-basics?delta=0 | Recorded | ||||
70 | R | Data Science: Wrangling | Harvard University | https://online-learning.harvard.edu/course/data-science-wrangling?delta=0 | Recorded | ||||
71 | R | R for Reproducible research | Phil McAleer | https://psyteachr.github.io/resources/ | list of resources | ||||
72 | R | Reproducible Research Data & Project Management in R | Anna Krystalli | https://annakrystalli.me/rrresearchACCE20/ | static | ||||
73 | R | Mastering Software Development in R | Roger D. Peng, Sean Kross, and Brooke Anderson | https://bookdown.org/rdpeng/RProgDA/ | static | ||||
74 | R - Git | R, Git, GitHub | Software carpentry community | https://software-carpentry.org/lessons/ | static | ||||
75 | R ggplot2 | ggplot2: Elegant Graphics for Data Analysis | Hadley Wickham | https://ggplot2-book.org/ | book | ||||
76 | R ggplot2 | Introduction to ggplot2 | UCLA | https://idre.ucla.edu/calendar-event/introduction-to-ggplot2-3 | Live | April 27, 2020 @ 1:00 pm - 4:00 pm california time | |||
77 | R ggplot2 | ggplot2 workshop | Thomas Lin Pedersen | https://www.youtube.com/watch?v=h29g21z0a68&t=16s | recorded workshops | ||||
78 | R ggplot2 | Data Science: Visualization | Harvard University | https://online-learning.harvard.edu/course/data-science-visualization?delta=0 | Recorded | ||||
79 | R ggplot2 | Data Visualization | Andrew Heiss | https://datavizm20.classes.andrewheiss.com/ | Live | May 11 2020 | June 1 2020 | ||
80 | R markdown | bookdown: Authoring Books and Technical Documents with R Markdown | Yihui Xie | https://bookdown.org/yihui/bookdown/ | static | ||||
81 | Stats | Statistical Rethinking: A Bayesian course | Richard McElreath | https://xcelab.net/rm/statistical-rethinking/ | book | Ilse - rrox slack | |||
82 | Stats | Multilevel Modelling for Public Health and Health Services Research | Leyland, Alastair H., Groenewegen, Peter P | https://www.springer.com/gb/book/9783030347994 | book | ||||
83 | Stats | Statistical inference (MOOC study group) | Daniel Lakens | www.coursera.org/learn/statistical-inferences | MOOC (recorded, live study groups) | 2020-04-09 16:00 BST | ongoing | jackie.thompson@bristol.ac.uk, katie.drax@bristol.ac.uk | |
84 | Stats | Improving Your Statistical Questions (MOOC study group) | Daniel Lakens | https://www.coursera.org/learn/improving-statistical-questions | MOOC (recorded, live study groups) | 2020-06-30 | ongoing | ||
85 | Stats | Structural Equation Modeling SEM | Sacha Epskamp | https://www.youtube.com/playlist?list=PLliBbGBc5nn3m8bXQ4CmOep3UmQ_5tVlC | recorded | ||||
86 | Stats | Statistical Rethinking: A Bayesian course | Richard McElreath | https://github.com/rmcelreath/statrethinking_winter2019 | recorded lectures | Ilse - rrox slack | |||
87 | Stats | Structural Equation Modeling SEM | Sacha Epskamp | http://sachaepskamp.com/SEM2019 | slides + lectures on youtube | ||||
88 | Stats | Statistics for Biologists | Nature | https://www.nature.com/collections/qghhqm/pointsofsignificance | static | ||||
89 | Stats | Design and Statistical Analysis of Animal Experiments | ILAR journal | https://academic.oup.com/ilarjournal/issue/55/3 | static | ||||
90 | Stats | Bayesian data analysis | Aki Vehtari | https://github.com/avehtari/BDA_course_Aalto | Recorded | ||||
91 | Stats - R | Statistical thinking from scratch : a primer for scientists | Edge, M. D. | https://global.oup.com/academic/product/statistical-thinking-from-scratch-9780198827634?cc=gb&lang=en&# | book | ||||
92 | Stats - R | Causal-Inference-for-Beginning-Undergraduates | Tom O'Grady, UCL | https://github.com/tomogradyucl/Causal-Inference-for-Beginning-Undergraduates | Recorded | ||||
93 | Stats - R | Learning Statistics with R | Danielle Navarro | https://learningstatisticswithr.com/ | static | ||||
94 | Stats - R | Statistical Inference via Data Science; R & tidyverse | Chester Ismay and Albert Y. Kim | https://moderndive.com/ | static | ||||
95 | Stats - R | Data Science: Probability | Harvard University | https://online-learning.harvard.edu/course/data-science-probability?delta=0 | Recorded | ||||
96 | Stats - R | Data Science: Inference and Modeling | Harvard University | https://online-learning.harvard.edu/course/data-science-inference-and-modeling?delta=0 | Recorded | ||||
97 | Stats - R | Data Science: Linear Regression | Harvard University | https://online-learning.harvard.edu/course/data-science-linear-regression?delta=0 | Recorded | ||||
98 | Stats - R | Statistics and R | Harvard University | https://online-learning.harvard.edu/course/statistics-and-r?delta=1 | Recorded | ||||
99 | Stats - R | Introduction to Linear Models and Matrix Algebra | Harvard University | https://online-learning.harvard.edu/course/data-analysis-life-sciences-2-introduction-linear-models-and-matrix-algebra?delta=0 | Recorded | ||||
100 | Stats - R | Learning Statistics with R | Danielle Navarro | https://learningstatisticswithr.com/ | Static |