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ABCDEFGHIJKLM
1
http://rmdb.stanford.edu/repository/detail/ETERNA_R00_0000
12/21/2012122112_RD_EteRNAPlayerProjects_1M7test
ANNOTATION
modifier:1M7
MAPseq:tag:RTB000
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.500
processing:backgroundSubtraction
processing:normalization:boxplot
2
http://rmdb.stanford.edu/repository/detail/ETERNA_R00_0001
4/9/2013040913_PilotPlayerProjectPad91_2
ANNOTATION
MAPseq:tag:emulsion PCR library
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.204
processing:backgroundSubtraction
processing:normalization:GAGUA
3
http://rmdb.stanford.edu/repository/detail/ETERNA_R00_0002
4/9/2013040913_PilotPlayerProjectPad91_2_NOCOMBINERNA
ANNOTATION
MAPseq:tag:emulsion PCR library
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.204
processing:backgroundSubtraction
processing:normalization:GAGUA
4
http://rmdb.stanford.edu/repository/detail/ETERNA_R69_0000
3/7/2013030713_RD_Expt96_R69_CloudLab1
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.382
processing:backgroundSubtraction
processing:normalization:GAGUA
5
http://rmdb.stanford.edu/repository/detail/ETERNA_R69_0001
ANNOTATION
MAPseq:tag:emulsion PCR library
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.913
processing:backgroundSubtraction
processing:normalization:GAGUA
6
http://rmdb.stanford.edu/repository/detail/ETERNA_R70_0000
EteRNA round 70 [Cloud Lab 2], our first switch tests
ANNOTATION
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.151
processing:backgroundSubtraction
processing:normalization:GAGUA
7
http://rmdb.stanford.edu/repository/detail/ETERNA_R71_0000
5/10/2013051013_WK_R71_CloudLab3_1M7
ANNOTATION
modifier:1M7
MAPseq:tag:FAM-RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.037
processing:backgroundSubtraction
processing:normalization:GAGUA
8
http://rmdb.stanford.edu/repository/detail/ETERNA_R72_0000
6/11/2013061113_CloudLab4_R72
ANNOTATION
modifier:1M7
MAPseq:tag:RTB002
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.566
processing:backgroundSubtraction
processing:normalization:GAGUA
9
http://rmdb.stanford.edu/repository/detail/ETERNA_R73_0000
player-designed puzzles and the first cloud lab "expert submissions"
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.170
processing:backgroundSubtraction
processing:normalization:GAGUA
10
http://rmdb.stanford.edu/repository/detail/ETERNA_R73_0001
7/30/2013073013_CloudLab5_R73_CompileAll
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.135
processing:backgroundSubtraction
processing:normalization:GAGUA
11
http://rmdb.stanford.edu/repository/detail/ETERNA_R74_0000
R74 designs from Eterna
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.138
processing:backgroundSubtraction
processing:normalization:GAGUA
12
http://rmdb.stanford.edu/repository/detail/ETERNA_R75_0000
R75
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.173
processing:backgroundSubtraction
processing:normalization:GAGUA
13
http://rmdb.stanford.edu/repository/detail/ETERNA_R76_0000
8/23/2013082313_WK_R76_CloudLab8
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.174
processing:backgroundSubtraction
processing:normalization:GAGUA
14
http://rmdb.stanford.edu/repository/detail/ETERNA_R76_0001
0 P4-P6 domain, Tetrahymena ribozyme P4-P6 with double reference hairpin
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.195
processing:backgroundSubtraction
processing:normalization:GAGUA
15
http://rmdb.stanford.edu/repository/detail/ETERNA_R77_0000
9/23/2013092313_CloudLab9_R77
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.169
processing:backgroundSubtraction
processing:normalization:GAGUA
16
http://rmdb.stanford.edu/repository/detail/ETERNA_R77_0001
rdat not available
17
http://rmdb.stanford.edu/repository/detail/ETERNA_R78_0000
R78_2
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.184
processing:backgroundSubtraction
processing:normalization:GAGUA
18
http://rmdb.stanford.edu/repository/detail/ETERNA_R79_0000
R_79
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.196
processing:backgroundSubtraction
processing:normalization:GAGUA
19
http://rmdb.stanford.edu/repository/detail/ETERNA_R80_0000
2/5/2014020514_022414_CloudLab12_R80_150res_combined
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.080
processing:backgroundSubtraction
processing:normalization:GAGUA
20
http://rmdb.stanford.edu/repository/detail/ETERNA_R81_0000
2/4/2014020414_021314_CloudLab13_R81_Combined
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.365
processing:backgroundSubtraction
processing:normalization:GAGUA
21
http://rmdb.stanford.edu/repository/detail/ETERNA_R82_0000
2/5/2014020514_021414_CloudLab14_R82_combined
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.101
processing:backgroundSubtraction
processing:normalization:GAGUA
22
http://rmdb.stanford.edu/repository/detail/ETERNA_R83_0000
3/27/2014032714_032814_CloudLab15_R83_I_combined
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.500
processing:backgroundSubtraction
processing:normalization:boxplot
23
http://rmdb.stanford.edu/repository/detail/ETERNA_R83_0002
4/1/2014040114_ColudLab15_R83_no_gc4
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.300
processing:backgroundSubtraction
processing:normalization:GAGUA
24
http://rmdb.stanford.edu/repository/detail/ETERNA_R83_0003
4/3/2014040314_CloudLab15_R83_I_II_combined
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.363
processing:backgroundSubtraction
processing:normalization:GAGUA
25
http://rmdb.stanford.edu/repository/detail/ETERNA_R84_0000
4/21/2014042114_CloudLab16_R84
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.242
processing:backgroundSubtraction
processing:normalization:GAGUA
26
http://rmdb.stanford.edu/repository/detail/ETERNA_R85_0000
5/9/2014050914_CloudLab17_R85
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.129
processing:backgroundSubtraction
processing:normalization:GAGUA
27
http://rmdb.stanford.edu/repository/detail/ETERNA_R86_0000
6/9/2014060914_CloudLab18_R86
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.152
processing:backgroundSubtraction
processing:normalization:GAGUA
28
http://rmdb.stanford.edu/repository/detail/ETERNA_R87_0000
8/18/2014081814_CloudLab19_R87
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.212
processing:backgroundSubtraction
processing:normalization:GAGUA
29
http://rmdb.stanford.edu/repository/detail/ETERNA_R87_0001
8/21/2014082114_Cloudlab19_R87_combined
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.218
processing:backgroundSubtraction
processing:normalization:GAGUA
30
http://rmdb.stanford.edu/repository/detail/ETERNA_R87_0002
8/21/2014082114_CloudLab19_R87_II
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.222
processing:backgroundSubtraction
processing:normalization:GAGUA
31
http://rmdb.stanford.edu/repository/detail/ETERNA_R88_0000
8/27/2014082714_CloudLab20_combined_matchexp
ANNOTATION
modifier:1M7
MAPseq:tag:RTB001
chemical:MgCl2:10mM
chemical:HEPES:50mM(pH8.0)
temperature:24C
processing:overmodificationCorrectionExact
processing:ligationBiasCorrection:0.342
processing:backgroundSubtraction
processing:normalization:GAGUA
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