A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | R | S | T | U | V | W | X | Y | Z | AA | AB | AC | AD | AE | AF | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | SeqID | Library_ID | Library_name | Sample-prep_person | Sample-prep_url | Primary_taxa | SeqSubmissionDate | SeqReceiptDate | Tissue | Molecule | Platform | Sequencer | Length | BriefDesc | SRA_ID | Experiment | Product_url | Read1FileLocation | Read1URL | Read1FastQC | Read2FileLocation | Read2URL | Read2FastQC | ||||||||
2 | 16C_32psu_1_S1_L001 | 1 | 16C_32psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA1 | /Volumes/web/nightingales/S_salar/16C_32psu_1_S1_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_1_S1_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_1_S1_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_1_S1_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_1_S1_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_1_S1_L001_R2_001_fastqc.html | ||||||||||
3 | 16C_32psu_1_S1_L002 | 1 | 16C_32psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA1 | /Volumes/web/nightingales/S_salar/16C_32psu_1_S1_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_1_S1_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_1_S1_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_1_S1_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_1_S1_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_1_S1_L002_R2_001_fastqc.html | ||||||||||
4 | 16C_32psu_2_S2_L001 | 2 | 16C_32psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA2 | /Volumes/web/nightingales/S_salar/16C_32psu_2_S2_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_2_S2_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_2_S2_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_2_S2_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_2_S2_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_2_S2_L001_R2_001_fastqc.html | ||||||||||
5 | 16C_32psu_2_S2_L002 | 2 | 16C_32psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA2 | /Volumes/web/nightingales/S_salar/16C_32psu_2_S2_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_2_S2_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_2_S2_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_2_S2_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_2_S2_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_2_S2_L002_R2_001_fastqc.html | ||||||||||
6 | 16C_32psu_3_S3_L001 | 3 | 16C_32psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA3 | /Volumes/web/nightingales/S_salar/16C_32psu_3_S3_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_3_S3_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_3_S3_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_3_S3_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_3_S3_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_3_S3_L001_R2_001_fastqc.html | ||||||||||
7 | 16C_32psu_3_S3_L002 | 3 | 16C_32psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA3 | /Volumes/web/nightingales/S_salar/16C_32psu_3_S3_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_3_S3_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_3_S3_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_3_S3_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_3_S3_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_3_S3_L002_R2_001_fastqc.html | ||||||||||
8 | 16C_32psu_4_S4_L001 | 4 | 16C_32psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA4 | /Volumes/web/nightingales/S_salar/16C_32psu_4_S4_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_4_S4_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_4_S4_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_4_S4_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_4_S4_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_4_S4_L001_R2_001_fastqc.html | ||||||||||
9 | 16C_32psu_4_S4_L002 | 4 | 16C_32psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA4 | /Volumes/web/nightingales/S_salar/16C_32psu_4_S4_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_4_S4_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_4_S4_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_32psu_4_S4_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_32psu_4_S4_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_32psu_4_S4_L002_R2_001_fastqc.html | ||||||||||
10 | s_4_sequenceYOJI1 | 5 | yoji1 | O_kisutch | 20090522 | /Volumes/web/nightingales/O_kisutch/s_4_sequenceYOJI1.txt.gz | http://owl.fish.washington.edu/nightingales/O_kisutch/s_4_sequenceYOJI1.txt.gz | ||||||||||||||||||||||||
11 | 8C_32psu_1_S5_L001 | 5 | 8C_32psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA5 | /Volumes/web/nightingales/S_salar/8C_32psu_1_S5_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_1_S5_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_1_S5_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_1_S5_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_1_S5_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_1_S5_L001_R2_001_fastqc.html | ||||||||||
12 | 8C_32psu_1_S5_L002 | 5 | 8C_32psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA5 | /Volumes/web/nightingales/S_salar/8C_32psu_1_S5_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_1_S5_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_1_S5_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_1_S5_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_1_S5_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_1_S5_L002_R2_001_fastqc.html | ||||||||||
13 | s_4_sequenceYOJI2 | 6 | yoji2 | O_kisutch | 20090702 | /Volumes/web/nightingales/O_kisutch/s_4_sequenceYOJI2.txt.gz | http://owl.fish.washington.edu/nightingales/O_kisutch/s_4_sequenceYOJI2.txt.gz | ||||||||||||||||||||||||
14 | 8C_32psu_2_S6_L001 | 6 | 8C_32psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA6 | /Volumes/web/nightingales/S_salar/8C_32psu_2_S6_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_2_S6_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_2_S6_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_2_S6_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_2_S6_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_2_S6_L001_R2_001_fastqc.html | ||||||||||
15 | 8C_32psu_2_S6_L002 | 6 | 8C_32psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA6 | /Volumes/web/nightingales/S_salar/8C_32psu_2_S6_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_2_S6_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_2_S6_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_2_S6_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_2_S6_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_2_S6_L002_R2_001_fastqc.html | ||||||||||
16 | 8C_32psu_3_S7_L001 | 7 | 8C_32psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA7 | /Volumes/web/nightingales/S_salar/8C_32psu_3_S7_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_3_S7_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_3_S7_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_3_S7_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_3_S7_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_3_S7_L001_R2_001_fastqc.html | ||||||||||
17 | 8C_32psu_3_S7_L002 | 7 | 8C_32psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA7 | /Volumes/web/nightingales/S_salar/8C_32psu_3_S7_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_3_S7_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_3_S7_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_3_S7_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_3_S7_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_3_S7_L002_R2_001_fastqc.html | ||||||||||
18 | solid0078_20091105_RbbertsLab_DH2_F3 | 7 | DH2 | MG | http://genefish.wikispaces.com/Mac%27s+Notebook | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | Drayton Harbor | /Volumes/web/nightingales/C_gigas/solid0078_20091105_RbbertsLab_DH2_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_RbbertsLab_DH2_F3.tar.gz | |||||||||||||||||
19 | 8C_32psu_4_S8_L001 | 8 | 8C_32psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA8 | /Volumes/web/nightingales/S_salar/8C_32psu_4_S8_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_4_S8_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_4_S8_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_4_S8_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_4_S8_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_4_S8_L001_R2_001_fastqc.html | ||||||||||
20 | 8C_32psu_4_S8_L002 | 8 | 8C_32psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA8 | /Volumes/web/nightingales/S_salar/8C_32psu_4_S8_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_4_S8_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_4_S8_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_32psu_4_S8_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_32psu_4_S8_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_32psu_4_S8_L002_R2_001_fastqc.html | ||||||||||
21 | solid0078_20091105_DH3 | 8 | DH3 | MG | http://genefish.wikispaces.com/Mac%27s+Notebook | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | Drayton Harbor | http://www.sciencedirect.com/science/article/pii/S1744117X11001018 | /Volumes/web/nightingales/C_gigas/solid0078_20091105_DH3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_DH3.tar.gz | ||||||||||||||||
22 | 8C_26psu_1_S9_L001 | 9 | 8C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA9 | /Volumes/web/nightingales/S_salar/8C_26psu_1_S9_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_1_S9_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_1_S9_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_1_S9_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_1_S9_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_1_S9_L001_R2_001_fastqc.html | ||||||||||
23 | 8C_26psu_1_S9_L002 | 9 | 8C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA9 | /Volumes/web/nightingales/S_salar/8C_26psu_1_S9_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_1_S9_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_1_S9_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_1_S9_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_1_S9_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_1_S9_L002_R2_001_fastqc.html | ||||||||||
24 | solid0078_20091105_BB3 | 9 | BB3 | MG | http://genefish.wikispaces.com/Mac%27s+Notebook | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | Big Beef Creek | http://www.sciencedirect.com/science/article/pii/S1744117X11001018 | /Volumes/web/nightingales/C_gigas/solid0078_20091105_BB3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_BB3.tar.gz | ||||||||||||||||
25 | solid0078_20091105_RbbertsLab_RBC4_F3 | 10 | RBC 4 | S_namaycush | 20091112 | red blood cells | RNA | SOLiD | SE25 | Control | Control | /Volumes/web/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC4_F3.tar.gz | http://owl.fish.washington.edu/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC4_F3.tar.gz | ||||||||||||||||||
26 | 8C_26psu_2_S10_L001 | 10 | 8C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA10 | /Volumes/web/nightingales/S_salar/8C_26psu_2_S10_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_2_S10_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_2_S10_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_2_S10_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_2_S10_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_2_S10_L001_R2_001_fastqc.html | ||||||||||
27 | 8C_26psu_2_S10_L002 | 10 | 8C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA10 | /Volumes/web/nightingales/S_salar/8C_26psu_2_S10_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_2_S10_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_2_S10_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_2_S10_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_2_S10_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_2_S10_L002_R2_001_fastqc.html | ||||||||||
28 | solid0078_20091105_RbbertsLab_RBC1_F3 | 11 | RBC 1 | S_namaycush | 20091112 | red blood cells | RNA | SOLiD | SE25 | Poly_IC | Poly I:C | /Volumes/web/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC1_F3.tar.gz | http://owl.fish.washington.edu/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC1_F3.tar.gz | ||||||||||||||||||
29 | 8C_26psu_3_S11_L001 | 11 | 8C_26psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA11 | /Volumes/web/nightingales/S_salar/8C_26psu_3_S11_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_3_S11_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_3_S11_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_3_S11_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_3_S11_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_3_S11_L001_R2_001_fastqc.html | ||||||||||
30 | 8C_26psu_3_S11_L002 | 11 | 8C_26psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA11 | /Volumes/web/nightingales/S_salar/8C_26psu_3_S11_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_3_S11_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_3_S11_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_3_S11_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_3_S11_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_3_S11_L002_R2_001_fastqc.html | ||||||||||
31 | solid0078_20091105_RbbertsLab_RBC2_F3 | 12 | RBC 2 | S_namaycush | 20091112 | red blood cells | RNA | SOLiD | SE25 | Control | Control | /Volumes/web/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC2_F3.tar.gz | http://owl.fish.washington.edu/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC2_F3.tar.gz | ||||||||||||||||||
32 | 8C_26psu_4_S12_L001 | 12 | 8C_26psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA12 | /Volumes/web/nightingales/S_salar/8C_26psu_4_S12_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_4_S12_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_4_S12_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_4_S12_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_4_S12_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_4_S12_L001_R2_001_fastqc.html | ||||||||||
33 | 8C_26psu_4_S12_L002 | 12 | 8C_26psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA12 | /Volumes/web/nightingales/S_salar/8C_26psu_4_S12_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_4_S12_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_4_S12_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/8C_26psu_4_S12_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/8C_26psu_4_S12_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/8C_26psu_4_S12_L002_R2_001_fastqc.html | ||||||||||
34 | solid0078_20091105_RbbertsLab_RBC3_F3 | 13 | RBC 3 | S_namaycush | 20091112 | red blood cells | RNA | SOLiD | SE25 | Poly_IC | Poly I:C | /Volumes/web/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC3_F3.tar.gz | http://owl.fish.washington.edu/nightingales/S_maycush/solid0078_20091105_RbbertsLab_RBC3_F3.tar.gz | ||||||||||||||||||
35 | 16C_26psu_1_S13_L001 | 13 | 16C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA13 | /Volumes/web/nightingales/S_salar/16C_26psu_1_S13_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_1_S13_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_1_S13_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_1_S13_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_1_S13_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_1_S13_L001_R2_001_fastqc.html | ||||||||||
36 | 16C_26psu_1_S13_L002 | 13 | 16C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA13 | /Volumes/web/nightingales/S_salar/16C_26psu_1_S13_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_1_S13_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_1_S13_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_1_S13_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_1_S13_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_1_S13_L002_R2_001_fastqc.html | ||||||||||
37 | 16C_26psu_2_S14_L001 | 14 | 16C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA14 | /Volumes/web/nightingales/S_salar/16C_26psu_2_S14_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_2_S14_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_2_S14_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_2_S14_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_2_S14_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_2_S14_L001_R2_001_fastqc.html | ||||||||||
38 | 16C_26psu_2_S14_L002 | 14 | 16C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA14 | /Volumes/web/nightingales/S_salar/16C_26psu_2_S14_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_2_S14_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_2_S14_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_2_S14_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_2_S14_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_2_S14_L002_R2_001_fastqc.html | ||||||||||
39 | solid0078_20091105_RbbertsLab_GE_F3 | 14 | GE | CAB | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | oshv | Exposed | /Volumes/web/nightingales/C_gigas/solid0078_20091105_RbbertsLab_GE_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_RbbertsLab_GE_F3.tar.gz | |||||||||||||||||
40 | 16C_26psu_3_S15_L001 | 15 | 16C_26psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA15 | /Volumes/web/nightingales/S_salar/16C_26psu_3_S15_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_3_S15_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_3_S15_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_3_S15_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_3_S15_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_3_S15_L001_R2_001_fastqc.html | ||||||||||
41 | 16C_26psu_3_S15_L002 | 15 | 16C_26psu_3 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA15 | /Volumes/web/nightingales/S_salar/16C_26psu_3_S15_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_3_S15_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_3_S15_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_3_S15_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_3_S15_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_3_S15_L002_R2_001_fastqc.html | ||||||||||
42 | solid0078_20100107_MD_Roberts_Hao_64A_71A_64B_Roberts_GC_F3 | 15 | GC | CAB | C_gigas | 20100107 | larvae | SOLiD | SE25 | Control | Control | /Volumes/web/nightingales/C_gigas/solid0078_20100107_MD_Roberts_Hao_64A_71A_64B_Roberts_GC_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20100107_MD_Roberts_Hao_64A_71A_64B_Roberts_GC_F3.tar.gz | ||||||||||||||||||
43 | SeebRobertsTranscriptomics_20100303_Sam_2L_F3 | 16 | 2L | C_pallasii | 20100303 | liver | RNA | SOLiD | SE25 | 2L HKOD09 | /Volumes/web/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_2L_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_2L_F3.tar.gz | |||||||||||||||||||
44 | 16C_26psu_4_S16_L001 | 16 | 16C_26psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA16 | /Volumes/web/nightingales/S_salar/16C_26psu_4_S16_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_4_S16_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_4_S16_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_4_S16_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_4_S16_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_4_S16_L001_R2_001_fastqc.html | ||||||||||
45 | 16C_26psu_4_S16_L002 | 16 | 16C_26psu_4 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA16 | /Volumes/web/nightingales/S_salar/16C_26psu_4_S16_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_4_S16_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_4_S16_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/16C_26psu_4_S16_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/16C_26psu_4_S16_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/16C_26psu_4_S16_L002_R2_001_fastqc.html | ||||||||||
46 | SeebRobertsTranscriptomics_20100303_Sam_4L_F3 | 17 | 4L | C_pallasii | 20100303 | liver | RNA | SOLiD | SE25 | 3L HSITK09 | /Volumes/web/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_4L_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_4L_F3.tar.gz | |||||||||||||||||||
47 | CTRL_8C_26psu_1_S17_L001 | 17 | CTRL_8C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA17 | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_1_S17_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_1_S17_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_1_S17_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_1_S17_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_1_S17_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_1_S17_L001_R2_001_fastqc.html | ||||||||||
48 | CTRL_8C_26psu_1_S17_L002 | 17 | CTRL_8C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA17 | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_1_S17_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_1_S17_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_1_S17_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_1_S17_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_1_S17_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_1_S17_L002_R2_001_fastqc.html | ||||||||||
49 | SeebRobertsTranscriptomics_20100303_Sam_3L_F3 | 18 | 3L | C_pallasii | 20100303 | liver | RNA | SOLiD | SE25 | 4L HTOG09 | /Volumes/web/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_3L_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_3L_F3.tar.gz | |||||||||||||||||||
50 | CTRL_8C_26psu_2_S18_L001 | 18 | CTRL_8C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA18 | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_2_S18_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_2_S18_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_2_S18_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_2_S18_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_2_S18_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_2_S18_L001_R2_001_fastqc.html | ||||||||||
51 | CTRL_8C_26psu_2_S18_L002 | 18 | CTRL_8C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA18 | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_2_S18_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_2_S18_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_2_S18_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_8C_26psu_2_S18_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_8C_26psu_2_S18_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_8C_26psu_2_S18_L002_R2_001_fastqc.html | ||||||||||
52 | SeebRobertsTranscriptomics_20100303_Sam_6L_F3 | 19 | 6L | C_pallasii | 20100303 | liver | RNA | SOLiD | SE25 | 6L HPWS09 | /Volumes/web/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_6L_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_pallasii/SeebRobertsTranscriptomics_20100303_Sam_6L_F3.tar.gz | |||||||||||||||||||
53 | CTRL_16C_26psu_1_S19_L001 | 19 | CTRL_16C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA19 | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_1_S19_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_1_S19_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_1_S19_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_1_S19_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_1_S19_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_1_S19_L001_R2_001_fastqc.html | ||||||||||
54 | CTRL_16C_26psu_1_S19_L002 | 19 | CTRL_16C_26psu_1 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA19 | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_1_S19_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_1_S19_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_1_S19_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_1_S19_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_1_S19_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_1_S19_L002_R2_001_fastqc.html | ||||||||||
55 | F5BZJAM01 | 20 | SR01 | SJW | http://onsnetwork.org/kubu4/2009/10/27/mrna-isolation-herring-gonadovary-rna-from-20091023/ | C_pallasii | 20091027 | 20091119 | liver | RNA | 454 | SRX022719 | pool from all locations | Development of Genomic Resources for Pacific Herring through Targeted Transcriptome Pyrosequencing | /Volumes/web/nightingales/C_pallasii/F5BZJAM01.sff | http://owl.fish.washington.edu/nightingales/C_pallasii/F5BZJAM01.sff | |||||||||||||||
56 | F5BZJAM02 | 20 | SR02 | SJW | http://onsnetwork.org/kubu4/2009/10/27/mrna-isolation-herring-gonadovary-rna-from-20091023/ | C_pallasii | 20091027 | 20091119 | gonad | RNA | 454 | SRX082042 | pool from all locations | Development of Genomic Resources for Pacific Herring through Targeted Transcriptome Pyrosequencing | /Volumes/web/nightingales/C_pallasii/F5BZJAM02.sff | http://owl.fish.washington.edu/nightingales/C_pallasii/F5BZJAM02.sff | |||||||||||||||
57 | Sealice_F1_S20_L001 | 20 | Sealice_F1 | ST | https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | C_rogercresseyi | 20190712 | 20190719 | whole animal | DNA | Illumina | NovaSeq | PE150 | WGBS-ZymoPicoMethylseq | WGBS of female sea louse | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F1_S20_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_1_S19_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F1_S20_L001_R1_001_fastqc.html | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F1_S20_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_rogercresseyi/Sealice_F1_S20_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F1_S20_L001_R2_001_fastqc.html | ||||||||||
58 | Sealice_F1_S20_L002 | 20 | Sealice_F1 | ST | https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | C_rogercresseyi | 20190712 | 20190719 | whole animal | DNA | Illumina | NovaSeq | PE150 | WGBS-ZymoPicoMethylseq | WGBS of female sea louse | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F1_S20_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_1_S19_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F1_S20_L002_R1_001_fastqc.html | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F1_S20_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_rogercresseyi/Sealice_F1_S20_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F1_S20_L002_R2_001_fastqc.html | ||||||||||
59 | F5ORNKL01 | 21 | SR01 | SJW | http://onsnetwork.org/kubu4/2009/10/27/mrna-isolation-herring-gonadovary-rna-from-20091023/ | C_pallasii | 20091027 | 20091119 | liver | RNA | 454 | SRX022719 | pool from all locations | Development of Genomic Resources for Pacific Herring through Targeted Transcriptome Pyrosequencing | /Volumes/web/nightingales/C_pallasii/F5ORNKL01.sff | http://owl.fish.washington.edu/nightingales/C_pallasii/F5ORNKL01.sff | |||||||||||||||
60 | F5ORNKL02 | 21 | SR02 | SJW | http://onsnetwork.org/kubu4/2009/10/27/mrna-isolation-herring-gonadovary-rna-from-20091023/ | C_pallasii | 20091027 | 20091119 | gonad | RNA | 454 | SRX082042 | pool from all locations | Development of Genomic Resources for Pacific Herring through Targeted Transcriptome Pyrosequencing | /Volumes/web/nightingales/C_pallasii/F5ORNKL02.sff | http://owl.fish.washington.edu/nightingales/C_pallasii/F5ORNKL02.sff | |||||||||||||||
61 | CTRL_16C_26psu_2_S21_L001 | 21 | CTRL_16C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA21 | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_2_S21_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_2_S21_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_2_S21_L001_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_2_S21_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_2_S21_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_2_S21_L001_R2_001_fastqc.html | ||||||||||
62 | CTRL_16C_26psu_2_S21_L002 | 21 | CTRL_16C_26psu_2 | ST | https://shellytrigg.github.io/121th-post/, https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | S_salar | 20190712 | 20190719 | skin | DNA | Illumina | NovaSeq | PE150 | RRBS-ZymoPicoMethylseq | Temperature x salinity effect on salmon-sea lice infection, MspI + TaqA21 | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_2_S21_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_2_S21_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_2_S21_L002_R1_001_fastqc.html | /Volumes/web/nightingales/S_salar/CTRL_16C_26psu_2_S21_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/S_salar/CTRL_16C_26psu_2_S21_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/CTRL_16C_26psu_2_S21_L002_R2_001_fastqc.html | ||||||||||
63 | Roberts_20100712_HPW509_F3 | 22 | 1 G/O HPWS09 | C_pallasii | 20100712 | ovary | RNA | SOLiD | SE25 | /Volumes/web/nightingales/C_pallasii/Roberts_20100712_HPW509_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_pallasii/Roberts_20100712_HPW509_F3.tar.gz | ||||||||||||||||||||
64 | Sealice_F2_S22_L001 | 22 | Sealice_F2 | ST | https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | C_rogercresseyi | 20190712 | 20190719 | whole animal | DNA | Illumina | NovaSeq | PE150 | WGBS-ZymoPicoMethylseq | WGBS of female sea louse | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F2_S22_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_rogercresseyi/Sealice_F2_S22_L001_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F2_S22_L001_R1_001_fastqc.html | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F2_S22_L001_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_rogercresseyi/Sealice_F2_S22_L001_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F2_S22_L001_R2_001_fastqc.html | ||||||||||
65 | Sealice_F2_S22_L002 | 22 | Sealice_F2 | ST | https://shellytrigg.github.io/122th-post/, https://shellytrigg.github.io/123th-post/ | C_rogercresseyi | 20190712 | 20190719 | whole animal | DNA | Illumina | NovaSeq | PE150 | WGBS-ZymoPicoMethylseq | WGBS of female sea louse | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F2_S22_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_rogercresseyi/Sealice_F2_S22_L002_R1_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F2_S22_L002_R1_001_fastqc.html | /Volumes/web/nightingales/C_rogercresseyi/Sealice_F2_S22_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_rogercresseyi/Sealice_F2_S22_L002_R2_001.fastq.gz | http://gannet.fish.washington.edu/metacarcinus/Salmo_Calig/analyses/20190722/Sealice_F2_S22_L002_R2_001_fastqc.html | ||||||||||
66 | Roberts_20100712_CT_F3 | 23 | CT | P_flavescens | 20100712 | RNA | SOLiD | SE25 | /Volumes/web/nightingales/P_flavescens/Roberts_20100712_CT_F3.tar.gz | http://owl.fish.washington.edu/nightingales/P_flavescens/Roberts_20100712_CT_F3.tar.gz | |||||||||||||||||||||
67 | Roberts_20100712_PQ_F3 | 24 | PQ | P_flavescens | 20100712 | RNA | SOLiD | SE25 | /Volumes/web/nightingales/P_flavescens/Roberts_20100712_PQ_F3.tar.gz | http://owl.fish.washington.edu/nightingales/P_flavescens/Roberts_20100712_PQ_F3.tar.gz | |||||||||||||||||||||
68 | Roberts_20100712_WB_F3 | 25 | WB | P_flavescens | 20100712 | RNA | SOLiD | SE25 | /Volumes/web/nightingales/P_flavescens/Roberts_20100712_WB_F3.tar.gz | http://owl.fish.washington.edu/nightingales/P_flavescens/Roberts_20100712_WB_F3.tar.gz | |||||||||||||||||||||
69 | Roberts_20100712_Lean_F3 | 26 | Lean | S_namaycush | 20100712 | muscle | RNA | SOLiD | SE25 | /Volumes/web/nightingales/S_maycush/Roberts_20100712_Lean_F3.tar.gz | http://owl.fish.washington.edu/nightingales/S_maycush/Roberts_20100712_Lean_F3.tar.gz | ||||||||||||||||||||
70 | Roberts_20100712_Sisco_F3 | 27 | Sisco | S_namaycush | 20100712 | muscle | RNA | SOLiD | SE25 | /Volumes/web/nightingales/S_maycush/Roberts_20100712_Sisco_F3.tar.gz | http://owl.fish.washington.edu/nightingales/S_maycush/Roberts_20100712_Sisco_F3.tar.gz | ||||||||||||||||||||
71 | Roberts_20100712_CC_F3 | 28 | CC | H_cracherodii | 20100712 | digestive gland | RNA | SOLiD | SE25 | /Volumes/web/nightingales/H_cracherodii/Roberts_20100712_CC_F3.tar.gz | http://owl.fish.washington.edu/nightingales/H_cracherodii/Roberts_20100712_CC_F3.tar.gz | ||||||||||||||||||||
72 | Roberts_20100712_CE_F3 | 29 | CE | H_cracherodii | 20100712 | digestive gland | RNA | SOLiD | SE25 | /Volumes/web/nightingales/H_cracherodii/Roberts_20100712_CE_F3.tar.gz | http://owl.fish.washington.edu/nightingales/H_cracherodii/Roberts_20100712_CE_F3.tar.gz | ||||||||||||||||||||
73 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SC | 30 | SC | H_cracherodii | 20110419 | digestive gland | RNA | SOLiD | SE25 | Abalone Dg Exp1 | /Volumes/web/nightingales/H_cracherodii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SC.tar.gz | http://owl.fish.washington.edu/nightingales/H_cracherodii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SC.tar.gz | |||||||||||||||||||
74 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SE | 31 | SE | H_cracherodii | 20110419 | digestive gland | RNA | SOLiD | SE25 | Abalone Dg Exp1 | /Volumes/web/nightingales/H_cracherodii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SE.tar.gz | http://owl.fish.washington.edu/nightingales/H_cracherodii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SE.tar.gz | |||||||||||||||||||
75 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_UNMETH | 32 | SB unmeth C.gigas | C_gigas | 20110419 | gill | DNA | SOLiD | SE25 | https://img.skitch.com/20111020-p2guuhtqgff481139jikgdyn46.png | /Volumes/web/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_UNMETH.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_UNMETH.tar.gz | |||||||||||||||||||
76 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_METH | 34 | SB meth C.gigas | C_gigas | 20110419 | gill | DNA | SOLiD | SE25 | /Volumes/web/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_METH.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_METH.tar.gz | ||||||||||||||||||||
77 | solid0078_20110412_MASH_MX | 36 | MA | M_mercenaria | 20110419 | gill | RNA | SOLiD | SE25 | /Volumes/web/nightingales/M_merceria/solid0078_20110412_MASH_MX.tar.gz | http://owl.fish.washington.edu/nightingales/M_merceria/solid0078_20110412_MASH_MX.tar.gz | ||||||||||||||||||||
78 | solid0078_20110412_BARN_BX | 37 | BX | M_mercenaria | 20110419 | gill | RNA | SOLiD | SE25 | /Volumes/web/nightingales/M_merceria/solid0078_20110412_BARN_BX.tar.gz | http://owl.fish.washington.edu/nightingales/M_merceria/solid0078_20110412_BARN_BX.tar.gz | ||||||||||||||||||||
79 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_RE22 | 38 | Vt RE22 | V_tubiashii | 20110419 | DNA | SOLiD | SE25 | /Volumes/web/nightingales/V_tubiashii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_RE22.tar.gz | http://owl.fish.washington.edu/nightingales/V_tubiashii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_RE22.tar.gz | |||||||||||||||||||||
80 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_19106VT | 39 | Vt STRAIN | V_tubiashii | 20110419 | DNA | SOLiD | SE25 | /Volumes/web/nightingales/V_tubiashii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_19106VT.tar.gz | http://owl.fish.washington.edu/nightingales/V_tubiashii/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_19106VT.tar.gz | |||||||||||||||||||||
81 | filtered_P_Ab_Air_CAGATC_L001 | 45 | P_Ab_Air | Friedman | H_kamtschatkana | 20110908 | 20111121 | larvae | RNA | Illumina | SE36 | SRA057107 | 400ppm;PNW genomics | Genomic resource development for shellfish of conservation concern | /Volumes/web/nightingales/H_kamtschatka/filtered_P_Ab_Air_CAGATC_L001_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/H_kamtschatka/filtered_P_Ab_Air_CAGATC_L001_R1.fastq.gz | |||||||||||||||
82 | filtered_P_Ab_CO2_ACTTGA_L001 | 46 | P_Ab_CO2 | Friedman | H_kamtschatkana | 20110908 | 20111121 | larvae | RNA | Illumina | SE36 | SRA057107 | 1000ppm;PNW genomics | Genomic resource development for shellfish of conservation concern | /Volumes/web/nightingales/H_kamtschatka/filtered_P_Ab_CO2_ACTTGA_L001_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/H_kamtschatka/filtered_P_Ab_CO2_ACTTGA_L001_R1.fastq.gz | |||||||||||||||
83 | filtered_BSseqGill_L003 | 47 | SB MBD meth (bisulfite) | C_gigas | 20120130 | gill | DNA | Illumina | SE36 | BS-seq | SRX327373 | Predominant intragenic methylation is associated with gene expression characteristics in a bivalve mollusc | /Volumes/web/nightingales/C_gigas/filtered_BSseqGill_L003_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BSseqGill_L003_R1.fastq.gz | |||||||||||||||||
84 | filtered_2200_GTTTCG_L004 | 50 | 2200 | Friedman | O_lurida | 20120814 | larvae | RNA | Illumina | SE36 | 2200ppm CO2 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_400_GTCCGC_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_400_GTCCGC_L004_R1.fastq.gz | |||||||||||||||||
85 | filtered_400_GTCCGC_L004 | 51 | 400 | Friedman | O_lurida | 20120814 | larvae | RNA | Illumina | SE36 | 400ppm CO2 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_1000_GTGAAA_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_1000_GTGAAA_L004_R1.fastq.gz | |||||||||||||||||
86 | filtered_1000_GTGAAA_L004 | 52 | 1000 | Friedman | O_lurida | 20120814 | larvae | RNA | Illumina | SE36 | 1000ppm CO2 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_1600_GTGGCC_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_1600_GTGGCC_L004_R1.fastq.gz | |||||||||||||||||
87 | filtered_1600_GTGGCC_L004 | 53 | 1600 | Friedman | O_lurida | 20120814 | larvae | RNA | Illumina | SE36 | 1600ppm CO2 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_2200_GTTTCG_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_2200_GTTTCG_L004_R1.fastq.gz | |||||||||||||||||
88 | QPX_DNA_GTGAAA_L001 | 54 | QPX DNA | Lexie, SJW | http://onsnetwork.org/kubu4/2012/07/10/chloroform-clean-up-lexies-qpx-rna-from-20110504/ | QPX | 20120711 | 20120731 | DNA | Illumina | SE36 | SRX197335 | Development of Genomic Resources for a thraustochytrid Pathogen and Investigation of Temperature Influences on Gene Expression | http://owl.fish.washington.edu/nightingales/QPX/QPX_DNA_GTGAAA_L001_R2.fastq.gz | /Volumes/web/nightingales/QPX/QPX_D_GTGAAA_L001_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/QPX/QPX_D_GTGAAA_L001_R1.fastq.gz | |||||||||||||||
89 | QPX_ATCC_10C_CGTACG_L001 | 55 | QPX ATCC 10C | Lexie, SJW | http://onsnetwork.org/kubu4/2012/07/10/chloroform-clean-up-lexies-qpx-rna-from-20110504/ | QPX | 20120711 | 20120731 | RNA | Illumina | SE36 | SRX197332 | Development of Genomic Resources for a thraustochytrid Pathogen and Investigation of Temperature Influences on Gene Expression | http://owl.fish.washington.edu/nightingales/QPX/QPX_ATCC_10C_CGTACG_L001_R2.fastq.gz | /Volumes/web/nightingales/QPX/QPX_ATCC_10C_CGTACG_L001_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/QPX/QPX_ATCC_10C_CGTACG_L001_R1.fastq.gz | |||||||||||||||
90 | QPX_ATCC_RT_GAGTGG_L001 | 56 | QPX ATCC RT | Lexie, SJW | http://onsnetwork.org/kubu4/2012/07/10/chloroform-clean-up-lexies-qpx-rna-from-20110504/ | QPX | 20120711 | 20120731 | RNA | Illumina | SE36 | SRX197332 | Development of Genomic Resources for a thraustochytrid Pathogen and Investigation of Temperature Influences on Gene Expression | http://owl.fish.washington.edu/nightingales/QPX/QPX_ATCC_RT_GAGTGG_L001_R2.fastq.gz | /Volumes/web/nightingales/QPX/QPX_ATCC_RT_GAGTGG_L001_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/QPX/QPX_ATCC_RT_GAGTGG_L001_R1.fastq.gz | |||||||||||||||
91 | filtered_WSO_ATTCCT_L003 | 57 | WSO | H_cracherodii | 20120807 | digestive gland | RNA | Illumina | SE36 | Friedman | /Volumes/web/nightingales/H_cracherodii/filtered_WSO_ATTCCT_L003_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/H_cracherodii/filtered_WSO_ATTCCT_L003_R1.fastq.gz | |||||||||||||||||||
92 | filtered_WSP_CCGTCC_L003 | 58 | WS + P | H_cracherodii | 20120807 | digestive gland | RNA | Illumina | SE36 | Friedman | /Volumes/web/nightingales/H_cracherodii/filtered_WSP_CCGTCC_L003_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/H_cracherodii/filtered_WSP_CCGTCC_L003_R1.fastq.gz | |||||||||||||||||||
93 | filtered_NWS_ACTGAT_L003 | 59 | NWS | H_cracherodii | 20120807 | digestive gland | RNA | Illumina | SE36 | Friedman | /Volumes/web/nightingales/H_cracherodii/filtered_NWS_ACTGAT_L003_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/H_cracherodii/filtered_NWS_ACTGAT_L003_R1.fastq.gz | |||||||||||||||||||
94 | filtered_106A_Female_Mix_GATCAG_L007 | 60 | 106A Female Mix | O_lurida | 20120821 | gonad | RNA | Illumina | SE36 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_106A_Female_Mix_GATCAG_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_106A_Female_Mix_GATCAG_L007_R1.fastq.gz | |||||||||||||||||||
95 | filtered_106A_Female_Mix_GATCAG_L004 | 60 | 106A Female Mix | O_lurida | 20121219 | gonad | RNA | Illumina | PE72 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_106A_Female_Mix_GATCAG_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_106A_Female_Mix_GATCAG_L004_R1.fastq.gz | /Volumes/web/nightingales/O_lurida/filtered_106A_Female_Mix_GATCAG_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_106A_Female_Mix_GATCAG_L004_R2.fastq.gz | |||||||||||||||||
96 | filtered_106A_Male_Mix_TAGCTT_L007 | 61 | 106A Male Mix | O_lurida | 20120821 | gonad | RNA | Illumina | SE36 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_106A_Male_Mix_TAGCTT_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_106A_Male_Mix_TAGCTT_L007_R1.fastq.gz | |||||||||||||||||||
97 | filtered_106A_Male_Mix_TAGCTT_L004 | 61 | 106A Male Mix | O_lurida | 20121219 | gonad | RNA | Illumina | PE72 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_106A_Male_Mix_TAGCTT_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_106A_Male_Mix_TAGCTT_L004_R1.fastq.gz | /Volumes/web/nightingales/O_lurida/filtered_106A_Male_Mix_TAGCTT_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_106A_Male_Mix_TAGCTT_L004_R2.fastq.gz | |||||||||||||||||
98 | filtered_108A_Female_Mix_GGCTAC_L007 | 62 | 108A Female Mix | O_lurida | 20120821 | gonad | RNA | Illumina | SE36 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_108A_Female_Mix_GGCTAC_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_108A_Female_Mix_GGCTAC_L007_R1.fastq.gz | |||||||||||||||||||
99 | filtered_108A_Female_Mix_GGCTAC_L004 | 62 | 108A Female Mix | O_lurida | 20121219 | gonad | RNA | Illumina | PE72 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_108A_Female_Mix_GGCTAC_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_108A_Female_Mix_GGCTAC_L004_R1.fastq.gz | /Volumes/web/nightingales/O_lurida/filtered_108A_Female_Mix_GGCTAC_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_108A_Female_Mix_GGCTAC_L004_R2.fastq.gz | |||||||||||||||||
100 | filtered_108A_Male_Mix_AGTCAA_L007 | 63 | 108A Male Mix | O_lurida | 20120821 | gonad | RNA | Illumina | SE36 | Friedman | /Volumes/web/nightingales/O_lurida/filtered_108A_Male_Mix_AGTCAA_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/O_lurida/filtered_108A_Male_Mix_AGTCAA_L007_R1.fastq.gz |