ureter_v1.1_DRAFT

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1	Anatomical Structures, Cell Types and Biomarkers Table for Ureter v1.1
2
3	Author Name(s):	Douglas Strand; Sanjay Jain
4	Author ORCID(s):	0000-0002-0746-927X; 0000-0003-2804-127X
5	Reviewer(s):	Ellen M. Quardokus
6	Reviewer ORCID(s):	0000-0001-7655-4833
7	General Publication(s):	N/A
8	Data DOI:
9	Date:	revise for April 2023
10	Version Number:
11	AS/1	AS/1/LABEL	AS/1/ID	AS/2	AS/2/LABEL	AS/2/ID	AS/3	AS/3/LABEL	AS/3/ID	AS/3/NOTES	CT/1	CT/1/LABEL	CT/1/ID	CT/1/NOTES	CT/2	CT/2/LABEL	CT/2/ID	CT/2/NOTES	CT/3	CT/3/LABEL	CT/3/ID	BGene/1	BGene/1/LABEL	BGene/1/ID	BGene/2	BGene/2/LABEL	BGene/2/ID	BGene/3	BGene/3/LABEL	BGene/3/ID	BGene/4	BGene/4/LABEL	BGene/4/ID	BGene/5	BGene/5/LABEL	BGene/5/ID	BGene/6	BGene/6/LABEL	BGene/6/ID	BGene/7	BGene/7/LABEL	BGene/7/ID	BGene/8	BGene/8/LABEL	BGene/8/ID	BGene/9	BGene/9/LABEL	BGene/9/ID	BGene/10	BGene/10/LABEL	BGene/10/ID	BProtein/1	BProtein/1/LABEL	BProtein/1/ID	BProtein/2	BProtein/2/LABEL	BProtein/2/ID	BProtein/3	BProtein/3/LABEL	BProtein/3/ID	BProtein/4	BProtein/4/LABEL	BProtein/4/ID	BProtein/5	BProtein/5/LABEL	BProtein/5/ID	BProtein/6	BProtein/6/LABEL	BProtein/6/ID	BProtein/7	BProtein/7/LABEL	BProtein/7/ID	BProtein/8	BProtein/8/LABEL	BProtein/8/ID	BProtein/9	BProtein/9/LABEL	BProtein/9/ID	BProtein/10	BProtein10/LABEL	BProtein10/ID	BProtein/11/	BProtein/11/LABEL	BProtein/11/ID	BProteoform/1	BProteoform/1/LABEL	BProteoform/1/ID	BProteoform/2	BProteoform/2/LABEL	BProteoform/2/ID	BLipid/1	BLipid/1/LABEL	BLipid/1/ID	BLipid/2	BLipid/2/LABEL	BLipid/2/ID	BMetabolites/1	BMetabolites/1/LABEL	BMetabolites/1/ID	BMetabolites/2
12	ureter	ureter	UBERON:0000056	mucosa of left ureter	mucosa of left ureter	UBERON:0005005	urothelium of ureter	urothelium of ureter	UBERON:0001254		urothelium	ureter urothelial cell	CL:1001428		basal cell of ureter urothelium							KRT5	keratin 5	HGNC:6442	S100A2	S100 calcium binding protein A2	HGNC:10492	DKK1	dickkopf WNT signaling pathway inhibitor 1	HGNC:2891
13	ureter	ureter	UBERON:0000056	mucosa of left ureter	mucosa of left ureter	UBERON:0005005	urothelium of ureter	urothelium of ureter	UBERON:0001254		urothelium	ureter urothelial cell	CL:1001428		intermediate cell of ureter urothelium							TP63	tumor protein p63	HGNC:15979	KRT13	keratin 13	HGNC:6415	AKR1C1	aldo-keto reductase family 1 member C1	HGNC:384
14	ureter	ureter	UBERON:0000056	mucosa of left ureter	mucosa of left ureter	UBERON:0005005	urothelium of ureter	urothelium of ureter	UBERON:0001254		urothelium	ureter urothelial cell	CL:1001428		superficial cell of ureter urothelium							UPK1A	uroplakin 1A	HGNC:12577	UPK3A	uroplakin 3A	HGNC:12580	UPK1B	uroplakin 1B	HGNC:12578
15	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	ureter detrusor smooth muscle	ureter detrusor smooth muscle	UBERON:0009919		ureter smooth muscle cell	ureter smooth muscle cell	CL:1000979		detrusor smooth muscle cell of ureter			add to CL				DES	desmin	HGNC:2770	ACTG2	actin gamma 2, smooth muscle	HGNC:145	ACTA2	actin alpha 2, smooth muscle	HGNC:130
16	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	lamina propria of ureter	lamina propria of ureter	UBERON:0001253		myofibroblast	ureter adventitial cell	CL:1000708		myofibroblast cell of ureter							STC1	stanniocalcin 1	HGNC:11373	TNC	tenascin C	HGNC:5318	MFAP4	microfibril associated protein 4	HGNC:7035
17	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	lamina propria of ureter	lamina propria of ureter	UBERON:0001253		fibroblast	fibrocyte of adventitia of ureter	CL:1000308		PI16+ fibroblast cell of ureter							PI16	peptidase inhibitor 16	HGNC:21245	MFAP5	microfibril associated protein 5	HGNC:29673	DCN	decorin	HGNC:2705
18	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	lamina propria of ureter	lamina propria of ureter	UBERON:0001253		fibroblast	fibrocyte of adventitia of ureter	CL:1000308		DPT+ fibroblast cell of ureter							DPT	dermatopontin	HGNC:3011	C7	complement C7	HGNC:1346	DCN	decorin	HGNC:2705
19	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	lamina propria of ureter	lamina propria of ureter	UBERON:0001253		fibroblast	ureter adventitial cell	CL:1000708		lipofibroblast cell of ureter							PILRA	paired immunoglobin like type 2 receptor alpha	HGNC:20396	SLPI	secretory leukocyte peptidase inhibitor	HGNC:11092	APOE	apolipoprotein E	HGNC:613
20	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	lamina propria of ureter	lamina propria of ureter	UBERON:0001253		endothelium	ureter adventitial cell	CL:1000708		endothelial cell of ureter							PECAM1	platelet and endothelial cell adhesion molecule 1	HGNC:8823	CLDN5	claudin 5	HGNC:2047	SELE	selectin E	HGNC:10718
21	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	lamina propria of ureter	lamina propria of ureter	UBERON:0001253		smooth muscle	ureter adventitial cell	CL:1000708		vascular smooth muscle cell of ureter							MCAM	melanoma cell adhesion molecule	HGNC:6934	ADRA2A	adrenoceptor alpha 2A	HGNC:281	ACTA2	actin alpha 2, smooth muscle	HGNC:130
22	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	lamina propria of ureter	lamina propria of ureter	UBERON:0001253		smooth muscle	ureter adventitial cell	CL:1000708		pericyte cell of ureter							CD36	CD36 molecule	HGNC:1663	AVPR1A	arginine vasopressin receptor 1A	HGNC:895	ACTA2	actin alpha 2, smooth muscle	HGNC:130
23	ureter	ureter	UBERON:0000056	wall of left ureter	wall of left ureter	UBERON:0036376	ureter vasculature			add to uberon?
24	ureter	ureter	UBERON:0000056	renal pelvis	renal pelvis	UBERON:0001224	kidney calyx	kidney calyx	UBERON:0006517
25	ureter	ureter	UBERON:0000056	renal pelvis	renal pelvis	UBERON:0001224	major calyx	major calyx	UBERON:0001226
26	ureter	ureter	UBERON:0000056	renal pelvis	renal pelvis	UBERON:0001224	minor calyx	minor calyx	UBERON:0001227
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