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ELIXIR COMPUTE - flashtalks on cloud/compute services from nodes
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Focus: use of ELIXIR Cloud & Compute resources at the level of bioinformatics data & analysis
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Presentations
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PREAMBLE: ELIXIR node service delivery plans outline versatile transnational, national, institute level cloud resources.
We (ELIXIR Compute ExCo) now call for flash talks from ELIXIR nodes providing Compute services to introduce their local operations and plans shortly.
We discuss for instance what are the access models, security measures, and is there a commercial/hybrid cloud model supporting the provision
of servers for bioinformatics data analysis and other purposes. The Cloud part is followed by ELIXIR AAI demonstrations.
DISCUSSION: Many sites are national,transnational/international access is typically linked to grants.
Discussion needs to continue how resources to allocate for internationa/transnational bioinformatics use will emerge.
Many cloud and VM "flavors" exist, one size does not fit all.
ELIXIR nodes and e-Infrastructure organisations are welcome to join cloud discussion with ELIXIR Compute platform, events will be advertised at ELIXIR events pages
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Presenter and link to presentationNodeTitle/ infrastructure
service in one sentence
Principal target use:
transnational, national, institute
Bioinformatics flagshipKeywords Local/private/
hybrid/public/federated?
International access?International access policy (link)
Cost coverarge model:
user/operator/third party OR other (mixed)?
Other (security etc)
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Mirek RudaELIXIR CZCloud infrastructure for ELIXIR CZnational, transnationalMarine metagenomicspublic, federatedNO/YES, e.g. EXCELERATEno policy, collaboration
with Czech teams
Government (national)
funding for compute/storage resources; collaboration
with national e-infrastructures for additional resources
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Antti PursulaELIXIR FI, SE, DK, NONordic secure IT infrastructure -
Tryggve first approach
transnational (Nordic)Schizophrenia, private cloud across sitesprivate, secureYES, Nordic limiterhttps://wiki.neic.no/Tryggve_Getting_Started Joint nordic grant for countries
Secure cloud environments for sensitive data building on top of work of ELIXIR nodes,
planning use of ELIXIR AAI
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Jonathan LorenzoELIXIR FRBiosphere - French Infrastructure for Multi-Cloud Deployment of Bioinformatics Applicationsnational, transnationalBacterial genomics federated, national (5 clouds)NO/YES for EXCELERATEGovernment (national)
eduGAIN for authentication, 3 running clouds, 3 in progress; 490 users; OpenStack
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Mário J. Gaspar da SilvaELIXIR PT
Portuguese Bioinformatics Computational Infrastructure
national, transnationalPlants - OakPublic, federatedYESContact via ELIXIR PT
Node Home Page
mixed, national ("NIH Commons"
between governance areas)
recently formed national coordination HPC&cloud. eduGAIN for auth
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Jarno LaitinenELIXIR FIPouta IaaS Cloud Service for Biosciencenational, transnational (grant)Molecular Medicinecommunity cloudYES (grant participation)If CSC is partner it can be accepted by director. Otherwise costs. https://research.csc.fi/pricing-of-computing-services Ministry pays open academic research. Discussions going on.
Company wide ISO/IEC 271001. National goverment standard. Other system is specially designed for security point of view.
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Dario VianelloELIXIR EMBL-EBIEmbassy Cloud @EMBL-EBItransnational, institutePanCancer (1000 vCPU, 1 PB over NFS),
panProstate a follow up, Marine Metagenomics
Public, federatedYES (grant participation)
Contact an EBI GTL for details, collaboration with EMBL group
Other (mixed)
Housed in ISO27001 data centre, 5 PB storage exposed to embassy, SSO ELIXIR AAI
92 compute nodes; interest in hybrid cloud (local WG); cloud portal through ELIXIR AAI;
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Irene NoorenELIXIR NLNational cloud infrastructure @SURFnational, transnationalWorkshop as a servicepublic, privateNO, YES through collaboration with
national teams
mixed
hybrid cloud project
HPC Cloud service (OpenNebula); SURFconext; Galaxy SaaS; interest in hybrid clouds (SURFcumulus)
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Marco Antonio TangaroELIXIR ITIndigo datacloudinternational, nationalGalaxy as a servicedistributed, data federation
INDIGO-DataCloud; Galaxy as a cloud service used a the pilot use case
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Enol FernandezEGI.euEGI fedcloudinternational ELIXIR competence center - 4 use casesfederated, distributedYES (via federation and (ELIXIR) VO)EU grant, resource sharing
ISO20K, certificate - federated aai
AppDB, consolidator between clouds
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Not present but providing Compute for bioinformatics in ELIXIR
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ELIXIR DK
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ELIXIR SUI
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