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The Kraemer Lab runs online bi-weekly lab meetings. These are held on Thursdays at 4PM UK time (unless otherwise stated), and are open for all interested attendees to join. The meetings run for one hour and combine different topics related to our research and formats: talks by invited speakers, journal club-style paper discussions and deep dives into specific analytical methods. If you're interested in joining, feel free to contact Bernardo Gutierrez (bernardo.gutierrez@biology.ox.ac.uk).
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DateFormatHostSpeakerTopicAffiliationNotes
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October 16Invited speakerBernardoOscar Cortes AzueroQuantifying the burden of Chikungunya virus in BrazilUniversity of Cambridge
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October 30Paper discussionBernardo--Population immunity predicts evolutionary trajectories of SARS-CoV-2--
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November 13Invited speakerYaldaMark KhuranaHigh-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from DenmarkUniversity of Copenhagen
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November 27Methods discussionPrathyush--Hypergraphs and applications--
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December 11Invited speakerRhysSpyros LytrasLeveraging the power of protein language models to understand virus evolutionDivision of Systems Virology, University of TokyoMeeting at 12PM UK time
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December 25BREAK------
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January 8BREAK------
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January 22Invited speakerJosephFrancesco ParinoDefining regimes to control and contain the spatial dissemination of emerging infectious diseasesEPIcx Lab, INSERM, Sorbonne University
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February 5NO SESSION--------
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February 19Paper discussionPrathyush--Optimizing surveillance for livestock disease spreading through animal movements--
https://royalsocietypublishing.org/doi/10.1098/rsif.2012.0289
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March 5Invited speakerYaldaMahan GhafariIntrahost viral evolution SARS-CoV-2BDI & Department of Biology, University of Oxford
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March 19Paper discussionBernardo--Indian Ocean temperature anomalies predict long-term global dengue trends
https://www.science.org/doi/10.1126/science.adj4427?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
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April 2Methods discussionRhys--Quantifying signatures of natural selection on viral genomes--
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April 17Work in ProgressBen--Preliminary findings: Modelling wastewater surveillance for detecting novel pathogens--
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May 1Methods discussion Bernardo--Modelling population-level protective immunity--
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May 15Invited speakerPrathyushJonathan PekarH5N1 evolution and transmission in cattleUniversity of Edinburgh
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May 29Methods discussionCathal--Robust and actionable infectious disease forecasting--
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June 12NO SESSION--------
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June 26Invited speakerPrathyushNicola PedreschiThe temporal rich club phenomenonMathematical Institute, University of Oxfordhttps://www.nature.com/articles/s41567-022-01634-8
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July 10Invited speakerBernardoAishani Aatresh
What is the relationship between viral prospecting in animals and medical countermeasure development?
Rhodes Trust Scholar in Residence, University of Oxford
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July 24Methods discussionHillary--Dynamic sexual network modelling ~ MpoxKEMRI - University of Oxford
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August 7Methods discussionSumali--Serocatalytic models (for multi-lineage pathogens)
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August 21Invited speakerBernardoMarta Pardo Araujo
Understanding the Effect of Climate and Human Mobility on the Spread of Invasive Vectors and Diseases
Centro de Estudios Avanzados de Blanes (CEAB), Spain
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September 4Wrap-up sessionYalda, Prathyush and Bernardo--
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*Tentative
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Michaelmas term time
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Hilary term time
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Trinity term time
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