GAP Phylogenomics EOI STAGE 1_2021-03-04

	A	B	C	D	E	F	G	H	I
1	GAP Phylogenomics EOI STAGE 1
2
3	Instructions:
4	1. If you wish to develop an Expression of Interest (EOI) proposal, please contact the Project Manager, Mabel Lum (mlum@bioplatforms.com, Tel: 0435 387 007) who will create a spreadsheet for your team. Spreadsheets are locked and can only be edited by the owning team, however all details are visible, by default, to all teams. If your team wishes to remain anonymous, please discuss with the Project Manager.
5	2. On your team's spreadsheet, indicate in column E which genera you wish to provide material for, and complete the corresponding information cells for that genus (columns F to P). In deciding which genera you would like to contribute, please refer to column E on this master sheet which indicates whether another team(s) is intending to contribute that genus. If so, please contact the Project Manager who may be able to facilitate negotiation between teams toward an efficient division of target genera prior to submitting an EOI. The taxon list is locked and cannot be edited. If you wish to make suggestions for additional taxa, please list them at the end of the spreadsheet, from row 2097 onwards, and complete all the corresponding information cells for that genus (columns F to P).
6	3. Genus names are organised alphabetically by family. All native vascular genera (per the Australian Plant Census) are included on the list, however some genera have been or will be completed by other projects and are hence excluded from this EOI. These genera are coloured brown. For the remaining included genera, priority is colour coded: low (gold) for genera completed by PAFTOL but with a non-Australian species; and high (green) for genera not yet sequenced at all. Please do not edit any information in columns A-D. If you need a specific facet of the data (such as a filtered list of genera per state or territory), please contact the Project Manager or make a copy of your team's spreadsheet and work on it offline. Once you have finalised your cell entries offline, paste the information back into the relevant cells in your team's spreadsheet in the online version.
7	4. Once your spreadsheet is finalised and you are ready to submit your EOI, complete the EOI form and submit it to the Project Manager Mabel Lum (mlum@bioplatforms.com). Deadline: COB Friday, 13th March 2020.
8	5. Please note: We cannot accept plant samples that are not compliant with the Nagoya Protocol. All plant samples must be vouchered by a specimen identified to species level that is accessioned in a public herbarium. We cannot accept plant samples that are not vouchered (no exceptions).
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11	HIGH PRIORITY
12	LOW PRIORITY (COMPLETED BY PAFTOL BUT WITH NON-AUSTRALIAN SPECIES)
13	EXCLUDED (COMPLETED BY PAFTOL WITH AN AUSTRALIAN SPECIES)
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15	Native Australian angiosperm genus (per Australian Plant Census)	Scientific Name Authorship	Family	Distribution (Australian states, territories and offshore islands) and Biostatus (native unless otherwise indicated)	Number of teams intending to contribute material	Team(s) intending to contribute material.	Notes	Orphan taxa - no taxa sampled	Genera without an Australian representative sampled
16	×Cyanthera	Hopper & A.P.Br.	Orchidaceae		0			1	1
17	×Glossadenia	Kavulak.	Orchidaceae		0			1	1
18	Aeginetia	L.	Orobanchaceae	NT	0			1	1
19	Althaea	L.	Malvaceae	SA	0			1	1
20	Amperea	A.Juss.	Euphorbiaceae	WA, NT, SA, Qld, NSW, Vic, Tas	0		sampled by NSW, library produced but sequencing failed	1	1
21	Anemone	L.	Ranunculaceae	SA (naturalised), NSW (sparingly naturalised), Tas	0			1	1
22	Anisomeles	R.Br.	Lamiaceae	WA, ChI, NT, Qld	0			1	1
23	Ballantinia	E.A.Shaw	Brassicaceae	Vic, Tas	0			1	1
24	Baumea	Gaudich.	Cyperaceae	WA, NT, SA, Qld, NSW, LHI, ACT, Vic, Tas	0			1	1
25	Brachyglottis	J.R.Forst. & G.Forst.	Asteraceae	Tas	0		genus listed as 'removed'; only native species sometimes treated as Brachyglottis is treated by APC as Centropappus	1	1
26	Butomopsis	Kunth	Alismataceae	NT, Qld	0			1	1
27	Callicarpa	L.	Lamiaceae	WA, ChI, NT, Qld, NSW	0			1	1
28	Callistemon	R.Br.	Myrtaceae	WA, NT, SA, Qld, NSW, LHI, ACT (native and naturalised), Vic (native and naturalised), Tas	0			1	1
29	Cheesemania	O.E.Schulz	Brassicaceae	Tas	0		genus listed as 'removed'	1	1
30	Corsia	Becc.	Corsiaceae	Qld	0			1	1
31	Cyanostegia	Turcz.	Lamiaceae	WA	0			1	1
32	Cycnogeton	Endl.	Juncaginaceae	WA, NT, SA, Qld, NSW, ACT, Vic (native and naturalised), Tas	0			1	1
33	Cypselocarpus	F.Muell.	Gyrostemonaceae	WA	0			1	1
34	Cytogonidium	B.G.Briggs & L.A.S.Johnson	Restionaceae	WA	0			1	1
35	Dasymalla	Endl.	Lamiaceae	WA, NT	0			1	1
36	Demorchis	D.L.Jones & M.A.Clem.	Orchidaceae		0			1	1
37	Diaspasis	R.Br.	Goodeniaceae	WA	0		Diaspasis is now circumscripbed within Scaevola. Reference: Howarth, D. G., Gustafsson, M. H., Baum, D. A., & Motley, T. J. (2003). Phylogenetics of the genus Scaevola (Goodeniaceae): implication for dispersal patterns across the Pacific Basin and colonization of the Hawaiian Islands. American Journal of Botany, 90(6), 915-923; Shepherd, K. A., Lepschi, B. J., Johnson, E. A., Gardner, A. G., Sessa, E. B., & Jabaily, R. S. (2020). The concluding chapter: recircumscription of Goodenia (Goodeniaceae) to include four allied genera with an updated infrageneric classification. PhytoKeys, 152, 27.	1	1
38	Dicrastylis	J.Drumm. ex Harv.	Lamiaceae	WA, NT, SA, Qld, NSW	0			1	1
39	Dioclea	Kunth	Fabaceae	Qld	0			1	1
40	Diodontium	F.Muell.	Asteraceae	WA, NT	0		Nearly all collections of this species (if not all) are old, and sparse	1	1
41	Diplarrena	Labill.	Iridaceae	NSW, Vic, Tas	0			1	1
42	Elymus	L.	Poaceae	WA, SA, Qld, NSW, LHI, NI, ACT, Vic, Tas	0			1	1
43	Emilia	Cass.	Asteraceae	WA (naturalised), CoI, NT (naturalised), Qld (naturalised), NSW (naturalised)	0		flagged as not native to Australia	1	1
44	Enicostema	Blume	Gentianaceae	CoI	0			1	1
45	Entada	Adans.	Fabaceae	ChI, NT, Qld	0			1	1
46	Epaltes	Cass.	Asteraceae	WA, NT, SA, Qld, NSW, Vic	0		flagged as not native to Australia	1	1
47	Eschenbachia	Moench	Asteraceae	Qld, NSW (naturalised)	0			1	1
48	Feldstonia	P.S.Short	Asteraceae	WA	0			1	1
49	Gevuina	Molina	Proteaceae	Qld	0		Delete Gevuina, is restricted to South America, Australian species is now Bleasdalea, and is sampled	1	1
50	Hanslia	Schindl.	Fabaceae	Qld	0			1	1
51	Harmogia	Schauer	Myrtaceae	Qld, NSW	0			1	1
52	Harperia	W.Fitzg.	Restionaceae	WA	0		Now considered a Synonym of Desmocladus (Briggs 2014)	1	1
53	Hemigymnia	Stapf	Poaceae	Qld, NSW	0			1	1
54	Hemisteptia	Fisch. & C.A.Mey.	Asteraceae	Qld, NSW (extinct)	0			1	1
55	Homalosciadium	Domin	Apiaceae	WA	0			1	1
56	Hopkinsia	W.Fitzg.	Restionaceae	WA	0			1	1
57	Indagator	Halford	Malvaceae	Qld	0			1	1
58	Iphigenia	Kunth	Colchicaceae	WA, NT, Qld, NSW	1	RBGV,		0	0
59	Kelita	A.R.Bean	Amaranthaceae	Qld	0		deeply nested in Ptilotus (Hammer et al 2019)	1	1
60	Kulinia	B.G.Briggs & L.A.S.Johnson	Restionaceae	WA	0		Now considered a Synonym of Desmocladus (Briggs 2014)	1	1
61	Landoltia	Les & D.J.Crawford	Araceae	WA, SA, Qld, NSW, ACT, Vic	0			1	1
62	Leptochloa	P.Beauv.	Poaceae	WA, NT, SA, Qld, NSW	0			1	1
63	Lepturopetium	Morat	Poaceae	CoI	0			1	1
64	Liparophyllum	Hook.f.	Menyanthaceae	WA, Qld, NSW, Vic, Tas	0			1	1
65	Meeboldina	Suess.	Restionaceae	WA	0		Now considered a Synonym of Leptocarpus (Briggs 2014)	1	1
66	Melanthera	Rohr	Asteraceae	ChI, CoI, NT, Qld, NSW, LHI, NI	0			1	1
67	Meryta	J.R.Forst. & G.Forst.	Araliaceae	NI	0			1	1
68	Microcybe	Turcz.	Rutaceae	WA, SA, Vic	0			1	1
69	Mitreola	L.	Loganiaceae	WA, NT, Qld	0			1	1
70	Negria	F.Muell.	Gesneriaceae	LHI	0			1	1
71	Neosciadium	Domin	Apiaceae	WA, ?SA	0			1	1
72	Neotysonia	Dalla Torre & Harms	Asteraceae	WA	0		Neotysonia does not seem to have been collected since 1910, sampling may be difficult	1	1
73	Nestegis	Raf.	Oleaceae	NI	0			1	1
74	Newcastelia	F.Muell.	Lamiaceae	WA, NT, SA, Qld	0			1	1
75	Omegandra	G.J.Leach & C.C.Towns.	Amaranthaceae	NT, Qld	0			1	1
76	Oncinocalyx	F.Muell.	Lamiaceae	Qld, NSW	0			1	1
77	Onychosepalum	Steud.	Restionaceae	WA	0		Now considered a Synonym of Desmocladus (Briggs 2014)	1	1
78	Oxystelma	R.Br.	Apocynaceae	WA, NT	0			1	1
79	Paenula	Orchard	Asteraceae	NSW	0		this genus is known only from the type so sampling may be problematic	1	1
80	Pentaptilon	E.Pritz.	Goodeniaceae	WA	0		Pentaptilon is now circumscripbed within Goodenia. Reference: Shepherd, K. A., Lepschi, B. J., Johnson, E. A., Gardner, A. G., Sessa, E. B., & Jabaily, R. S. (2020). The concluding chapter: recircumscription of Goodenia (Goodeniaceae) to include four allied genera with an updated infrageneric classification. PhytoKeys, 152, 27.	1	1
81	Pleomele	Salisb.	Asparagaceae	NT, Qld	0			1	1
82	Premna	L.	Lamiaceae	WA, ChI, CoI, NT, Qld	0			1	1
83	Pringlea	T.Anderson ex Hook.f.	Brassicaceae	HI, MDI	0			1	1
84	Quisqualis	L.	Combretaceae	WA (naturalised), ChI, NT (naturalised), Qld (naturalised)	0		Looks only native to ChI; As far as I understand this species is embedded in Combretrum, which is already sampled FROM OVERSEAS. Probably best to cover a native Combretum.	1	1
85	Rhamnella	Miq.	Rhamnaceae	Qld	0			1	1
86	Rhetinocarpha	Paul G.Wilson & M.A.Wilson	Asteraceae	WA	0			1	1
87	Sauropus	Blume	Phyllanthaceae	WA, CoI (naturalised), ChI (naturalised), NT, SA, Qld (native and naturalised), NSW, Vic	0		Van Welzen et al 2014: Sauropus is a synonum of Breynia and all Australian samples are Synostemon, which is already sampled; At least the WA "Sauropus" are phrase names that have not been transferred to Synostemon, presumably also the others	1	1
88	Stenotalis	B.G.Briggs & L.A.S.Johnson	Restionaceae	WA	0		Now considered a Synonym of Leptocarpus (Briggs 2014)	1	1
89	Tripogon	Roem. & Schult.	Poaceae	WA, NT, SA, Qld, NSW, ACT, Vic	0			1	1
90	Trisetum	Pers.	Poaceae	Qld, NSW (native and naturalised), Vic, Tas	0			1	1
91	Vachellia	Wight & Arn.	Fabaceae	WA (native and naturalised), CoI (formerly naturalised), NT (native and naturalised), SA (naturalised), Qld (native and naturalised), NSW (naturalised)	0		sampled by NSW, library produced but sequencing failed	1	1
92	Ventilago	Gaertn.	Rhamnaceae	WA, NT, Qld, NSW	0			1	1
93	Verreauxia	Benth.	Goodeniaceae	WA	0		Verreauxia is now circumscripbed within Goodenia. Reference: Shepherd, K. A., Lepschi, B. J., Johnson, E. A., Gardner, A. G., Sessa, E. B., & Jabaily, R. S. (2020). The concluding chapter: recircumscription of Goodenia (Goodeniaceae) to include four allied genera with an updated infrageneric classification. PhytoKeys, 152, 27.	1	1
94	Villarsia	Vent.	Menyanthaceae	WA, SA, Qld, NSW, Vic, Tas	0		Villarsia is no longer in Austraelia - Tippery & Les 2009, who transferred all species to Liparophyllum and Ornduffia	1	1
95	Walteranthus	Keighery	Gyrostemonaceae	WA	0		Very rare and localised fire-ephemeral, WA. Only 4 samples in PERTH, most recent is 1982,	1	1
96	Wedelia	Jacq.	Asteraceae	WA, NT, SA, Qld, NSW	0		flagged as not native to Australia	1	1
97	Winifredia	L.A.S.Johnson & B.G.Briggs	Restionaceae	Tas	0		Submitted from NSW but extraction and subsequent lib prep failed	1	1
98	Zannichellia	L.	Potamogetonaceae	SA, NSW	0			1	1
99	Acmella	Rich. ex Pers.	Asteraceae	WA, NT, Qld, NSW	1	PAFTOL_nonAust_sp,	PAFTOL sample Acmella oppositifolia name updated to Heliopsis buphthalmoides	0	1
100	Actinoscirpus	(Ohwi) R.W.Haines & Lye	Cyperaceae	NT, Qld	1	PAFTOL_sp_or_Aust_status_unknown,		0	1