Synced JDRF metadata schema
 Share
The version of the browser you are using is no longer supported. Please upgrade to a supported browser.Dismiss

View only
 
ABCDEFGHIJKLMNOPQRSTUVWXYZAAABACAD
1
field namestudy_idpi_namesample_typebioproject_accessiongeo_loc_namesequencing_facilityenv_biomenv_featureenv_materialanimal_vendorhost_tissue_sampledpairedanalysis description
2
constraintsalphanumericAlphanumeric (and `-`)
Enum of (16S,WGS,MGX,MTX,etc)
PRJEBxxxxxxcountry:state:cityfree text
ENVO ontology: https://bioportal.bioontology.org/ontologies/ENVO
ENVO ontology: https://bioportal.bioontology.org/ontologies/ENVO
ENVO ontology: https://bioportal.bioontology.org/ontologies/ENVO
free string to accommodate different possible vendors
Use BRENDA Tissue and Enzyme source from http://bioportal.bioontology.org/ontologies/BTO
paired reads? Bool - default = false
free text
3
exampleEX9999HuttenhowermgxPRJEB22283
US:Massachusetts:Boston
Harvard Sequencing Core
ENVO:00000428
ENVO:00002297
ENVO:00010483
BTO_0000155FALSE
4
5
6
7
Changes from original
8
1. Reorded optional fields to match live site order
9
2. Made bioproject access optional (added to live site)
10
3. Made paired optional (as optional on live site)
11
4. Added analysis description (as optional on live site)
12
5. Updated bioproject contstraints to match NCBI FAQs
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
Loading...