| A | B | C | D | E | F | |
|---|---|---|---|---|---|---|
1 | Microbial Database | |||||
2 | Prof. Abel Méndez, Planetary Habitability Laboratory, University of Puerto Rico at Arecibo | |||||
3 | email: abel.mendez@upr.edu | |||||
4 | ||||||
5 | Version: 02 (Aug 13, 2009) | |||||
6 | ||||||
7 | This database contains microbial properties for almost 600 genera. | |||||
8 | All the data was extracted from Bergey's Manual of Determinative Bacteriology, (9th) edition (1992). | |||||
9 | This database was updated with some new fields, but it stills under construction. | |||||
10 | ||||||
11 | LEGEND | |||||
12 | ||||||
13 | NUMBER | NAME | DESCRIPTION | KEY | ||
14 | ID | Identification Number | ||||
15 | CN | Category Number (I-IV) | ||||
16 | GN | Group Number (1-35) | ||||
17 | DM | Domain | (b = bacteria, a = archae) | |||
18 | Group Name | Group Name | ||||
19 | Genus | Genus | (in some cases a species name is also included) | |||
20 | MB | Metabolism | (co = chemoorganotrophic, cl = chemolithotrophic, fha = facultative hydrogen autotroph) | |||
21 | AE | Aerobic | (+ = yes, - = no) | |||
22 | FA | Facultative Anaerobic | (+ = yes, - = no) | |||
23 | MA | Microaerophilic | (+ = yes, - = no) | |||
24 | AN | Anaerobic | (+ = yes, - = no) | |||
25 | WL | Cell Wall | (+ = yes, - = no) | |||
26 | GT | Gram Type | (+ = positive, - = negative) | |||
27 | SL | Soil Habitat | (+ = yes, - = no) | |||
28 | FW | Freshwater Habitat | (+ = yes, - = no) | |||
29 | SW | Seawater Habitat | (+ = yes, - = no) | |||
30 | HT | Host Dependant or Associated Habitat | (+ = yes, - = no) | |||
31 | Shape | Cell Shape | (he = helical, cr = curved rod, vb = vibroid, rd = rod, cc = cocci) | |||
32 | Size | Cell Size (µm) | ||||
33 | G+C | DNA G+C Content (mol %) | ||||
34 | MT | Motility | (+ = yes, - = no) | |||
35 | T min | Minimum Growth Temperature (°C) | (in some cases these are lower limits) | |||
36 | T max | Maximum Growth Temperature (°C) | (in some cases these are upper limits) | |||
37 | To min | Minimum Optimum Growth Temperature (°C). | ||||
38 | To max | Maximum Optimum Growth Temperature (°C). | ||||
39 | pH min | Minimum Growth pH | (in some cases these are lower limits) | |||
40 | pH max | Maximum Growth pH | (in some cases these are upper limits) | |||
41 | pHo min | Minimum Optimum Growth pH. | ||||
42 | pHo max | Maximum Optimum Growth pH. | ||||
43 | S min | Minimum Growth Salinity (% w/v) | (in some cases these are lower limits) | |||
44 | S max | Maximum Growth Salinity (% w/v) | (in some cases these are upper limits) | |||
45 | So min | Minimum Optimum Growth Salinity (% w/v). | ||||
46 | So max | Maximum Optimum Growth Salinity (% w/v). | ||||
47 | GT | Generation Time (hours) | (under optimum growth conditions) | |||
48 | T | Growth temperature (°C) | ||||
49 | To | Optimum Growth Temperature (°C) | ||||
50 | pH | Growth pH. | ||||
51 | pHo | Optimum Growth pH. | ||||
52 | S | Growth Salinity (% w/v). | ||||
53 | So | Optimum Growth Salinity (% w/v). | ||||