Grugni et al 2019
 Share
The version of the browser you are using is no longer supported. Please upgrade to a supported browser.Dismiss

View only
 
 
ABCDEFGHIJKLMNOPQRSTUVWXYZ
1
Table S1. List of the high coverage samples analysed in this study along with their geographic origin and Y-chromosome haplogroup affiliation.
2
3
Sample ID(a)
SourceAverage sequence depth on target
Main Hg
sub-haplogroup classification (b)MacroareaCountry/Region (Ethnic group) Reference
5
NA12
modern DNA
53.09Hg QM242, L472, M346, L53, L54, M1107, M930, M3, Y4276, Y4303, Y4300Meso AmericaMexicoPresent study
https://www.yfull.com/tree/Q-Y4300/
10
NA34
modern DNA
49.64Hg QM242, L472, M346, L53, L54, M1107, M930, M3, M848Central AmericaPanamaPresent studyhttps://www.yfull.com/tree/Q-M3/
18
NA58
modern DNA
53.91Hg QM242, L472, M346, L53, L54, M1107, M930, M3, M848, CTS2731Meso AmericaMexicoPresent study
https://www.yfull.com/tree/Q-CTS2731*/
35
NA3
modern DNA
53.28Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, M925, Y12421, BZ1287
Central AmericaPanamaPresent study
https://www.yfull.com/tree/Q-Y12421/
36
NA35
modern DNA
61.08Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, M925, Y12421, BZ1287
Central AmericaPanamaPresent study
https://www.yfull.com/tree/Q-Y12421/
39
NA11
modern DNA
53.69Hg QM242, L472, M346, L53, L54, M1107, M930, M3, M848, B42, B43
South East America
BrazilPresent studyhttps://www.yfull.com/tree/Q-M3/
40
NA23
modern DNA
52.49Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, B42, B43, Z35504
South East America
ParaguayPresent studyhttps://www.yfull.com/tree/Q-M3/
52
NA15
modern DNA
52.40Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, Z5906, CTS4000, Z5907, Z35487
South AmericaPeruPresent study
https://www.yfull.com/tree/Q-CTS4000/
53
NA13
modern DNA
75.15Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, Z5906, CTS4000, Z5907, Z35487
South AmericaPeruPresent study
https://www.yfull.com/tree/Q-CTS4000/
54
NA2
modern DNA
67.26Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, Z5906, CTS4000, Z5907, Z35487
South AmericaBoliviaPresent study
https://www.yfull.com/tree/Q-CTS4000/
61
NA30
modern DNA
52.56Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, Z5906, PV191, PV193
South East America
ArgentinaPresent study
https://www.yfull.com/tree/Q-Z5906*/
62
NA59
modern DNA
63.27Hg QM242, L472, M346, L53, L54, M1107, M930, M3, M848, Y780South AmericaPeruPresent study
https://www.yfull.com/tree/Q-Y780*/
65
NA1
modern DNA
65.59Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, Y780, Y805, Z35619
South AmericaPeruPresent study
https://www.yfull.com/tree/Q-Y805/
75
NA61
modern DNA
67.91Hg QM242, L472, M346, L53, L54, M1107, M930, M3, M848, PV332South AmericaPeruPresent studyhttps://www.yfull.com/tree/Q-M3/
90
NA33
modern DNA
60.62Hg Q
M242, L472, M346, L53, L54, M1107, M930, M3, M848, Z5908, Z5910, Z5911, Z5912, PV423, SA01
South AmericaPeruPresent study
https://www.yfull.com/tree/Q-Z5911/
95
NA52
modern DNA
50.38Hg QM242, L472, M346, L53, L54, M1107, Z780Meso AmericaMexicoPresent study
https://www.yfull.com/tree/Q-CTS2730/
97
NA42
modern DNA
52.91Hg QM242, L472, M346, L53, L54, M1107, Z780Meso AmericaMexico (Valley Zapotecs)Present study
https://www.yfull.com/tree/Q-CTS2730/
98
NA4
modern DNA
63.61Hg QM242, L472, M346, L53, L54, M1107, Z780South AmericaPeruPresent study
https://www.yfull.com/tree/Q-CTS2730/
100
NA62
modern DNA
63.26Hg QM242, L472, M346, L53, L54, M1107, Z780, SA02Central AmericaPanamaPresent study
https://www.yfull.com/tree/Q-CTS2730/
101
NA5
modern DNA
80.77Hg QM242, L472, M346, L53, L54, M1107, Z780, SA02South AmericaColombiaPresent study
https://www.yfull.com/tree/Q-CTS2730/
105
NA22
modern DNA
57.29Hg QM242, L472, M346, L53, L54, M1107, Z780, Z781, YP910Meso AmericaMexicoPresent study
https://www.yfull.com/tree/Q-YP1111/
106
NA53
modern DNA
70.12Hg QM242, L472, M346, L53, L54, M1107, Z780, Z781, YP919, BZ1716Meso AmericaMexicoPresent study
https://www.yfull.com/tree/Q-YP921/
107
NA25
modern DNA
60.65Hg QM242, L472, M346, L53, L54, M1107, Z780, Z781, YP919, BZ1716Meso AmericaMexicoPresent study
https://www.yfull.com/tree/Q-YP921/
109
NA31
modern DNA
52.76Hg QM242, L472, M346, L53, L54, M1107, Z780, Z781, YP919, M4743South AmericaColombiaPresent study
https://www.yfull.com/tree/Q-Z781*/
112
EA46
modern DNA
54.57Hg QM242, L472, M346, L53, L54, L330, B287, B30East AsiaMongolia/Khovd, MyangadPresent study
https://www.yfull.com/tree/Q-YP1691/
120
EA45
modern DNA
53.58Hg QM242, L472, M346, L53, L54, L330, YP771East AsiaMongolia/Khovd, MyangadPresent study
https://www.yfull.com/tree/Q-BZ180/
126
EA63
modern DNA
52.16Hg QM242, L472, M346, Y2659, L940EuropeUkrainePresent study
https://www.yfull.com/tree/Q-Y15684*/
швед под Полтавой?
129
EA38
modern DNA
53.12Hg QM242, L472, F1096, F746, B143, PV706, PV707SiberiaKamchatka (Koryaks)Present study
https://www.yfull.com/tree/Q-YP1500/
общий предок с палеоэскимосом, подтверждение вывода по образцам Кармин
136
EA43
modern DNA
52.46Hg QM242, L472, F1096, F746, pre-M120, M120South East AsiaChinaPresent study
https://www.yfull.com/tree/Q-Y515/
142
EA49
modern DNA
54.55Hg QM242, L472, F1096, M25, L713, YP1677Middle EastIran/LorestanPresent study
https://www.yfull.com/tree/Q-YP1677/
туркмен?
149
EA51
modern DNA
53.73Hg QM242, L275, F1213, M378, L245Middle EastIran/GolestanPresent study
https://www.yfull.com/tree/Q-BZ306/
150
NA56
modern DNA
54.33Hg QM242, L275, F1213, M378, BZ386Central AmericaPanamaPresent study
https://www.yfull.com/tree/Q-BZ386/
153
EA47
modern DNA
54.42Hg QM242, L275, Y1150, YP4500EuropeItaly/Lombardy, BergamoPresent study
https://www.yfull.com/tree/Q-Y28557/
155
EA50
modern DNA
52.51Hg QM242, L275, Y1150, YP4500South AsiaIndia (Hindu)Present study
https://www.yfull.com/tree/Q-Y34111*/
158
159
Notes:
160
(a) NA: Native American; EA: Eurasian
161
(b) Classification according to the phylogeny of Additional file 5.
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
Loading...