Source of entry

Committee Reviewed

Vendor Reviewed

Vendor Method

Standard name?

Application mode (when analyte is a medication)

Specimen Container?

Specimen Handling?

Vendor Result Description - gets spilt into Scale, QL and QN representation

Result scale (QL Nar, QL Nom, QL ord, QN, semiQN)

Units of measure

Reference Range

Test Performed LOINC Code

Test Ordered LOINC Code

Test Ordered LOINC Long Name

Vendor Comment

Clinical Context needed for mapping

Vendor Analyte Code

Vendor Reference ID

Equipment UID Type

LOINC Property

LOINC Version ID

Publication Version ID

Harmonization Indicator

Authorization Setting (CLIA)

Notes and Questions

Link to package insert

<Feel free to add other columns>

42425007^Equivocal^SCT
260415000^Not detected^SCT
260373001^Detected^SCT
455371000124106^Invalid result^SCT or 125154007^Specimen unsatisfactory for evaluation^SCT

Neisseria gonorrhoeae rRNA [Presence] in Specimen by NAA with probe detection

Neisseria gonorrhoeae rRNA [Presence] in Specimen by NAA with probe detection

Aptima® HCV Quant Dx Assay

HCV not detected - is NOT reported under this LOINC, since not a numeric value
HCV detected, less than 10 IU/m - report as "<10 IU/mL"
numeric value between 10 and 25 IU/mL
numeric value between 25 to 100,000,000 IU/mL
>100,000,000 IU/mL
invalid - is NOT reported under this LOINC, since not a numeric value

Hepatitis C virus RNA [Units/volume] (viral load) in Serum or Plasma by NAA with probe detection

Hepatitis C virus RNA panel (viral load) in Serum or Plasma by NAA with probe detection

Aptima® HCV Quant Dx Assay

HCV not detected - is NOT reported under this LOINC, since not a numeric value
HCV detected, less than 1.0 {Log_IU}/mL- report as "<1 {Log_IU}/mL"
numeric value between 1.00 to 1.40 {Log_IU}/mL
numeric value between 1.40 to 8.00 {Log_IU}/mL
> 8.00 {Log}IU/mL
invalid - is NOT repoerted under this LOINC, since not a numeric value

Hepatitis C virus RNA [log units/volume] (viral load) in Serum or Plasma by NAA with probe detection

Hepatitis C virus RNA panel (viral load) in Serum or Plasma by NAA with probe detection

Aptima® HCV Quant Dx Assay

260415000^Not detected^SCT
260373001^Detected^SCT
455371000124106^Invalid result^SCT or 125154007^Specimen unsatisfactory for evaluation^SCT

Hepatitis C virus RNA [Presence] in Serum or Plasma by NAA with probe detection

Hepatitis C virus RNA panel (viral load) in Serum or Plasma by NAA with probe detection

Repeatedly Reactive [735269004^Repeatedly reactive (qualifier value)^SCT] - (If one or both of the duplicate retests have a COI >= 1.00)

Nonreactive [131194007^Non-Reactive^SCT] - (If both of the duplicate retests have a COI <1.00)"

Hepatitis C virus Ab [Presence] in Serum or Plasma by Immunoassay

Hepatitis C virus Ab [Presence] in Serum or Plasma by Immunoassay

cobas HCV quantitative nucleic acid test for use on the cobas 6800/8800 Systems

Not detected [260415000^Not detected^SCT]
Detected [260373001^Detected^SCT]
Below threshold level [260988000^Below threshold level^SCT]
Numeric in IU/mL
Above threshold level [260981006^Above threshold level^SCT]

Hepatitis C virus RNA [Units/volume] (viral load) in Serum or Plasma by NAA with probe detection

Hepatitis C virus RNA [Units/volume] (viral load) in Serum or Plasma by NAA with probe detection

will need to set up the test to have two OBXs, where one is for the quantitative result and the second is for the interpretation.

Note: for quantitative results, OBX-2 should be “SN” using the quantitative LOINC and for qualitative results, OBX-2 should be either “CE” or “CWE”.

cobas HCV quantitative nucleic acid test for use on the cobas 6800/8800 Systems

Not detected [260415000^Not detected^SCT]
Detected [260373001^Detected^SCT]
Below threshold level [260988000^Below threshold level^SCT]
Numeric in IU/mL
Above threshold level [260981006^Above threshold level^SCT]

Hepatitis C virus RNA [Presence] in Serum or Plasma by NAA with probe detection^LN

Hepatitis C virus RNA [Units/volume] (viral load) in Serum or Plasma by NAA with probe detection

will need to set up the test to have two OBXs, where one is for the quantitative result and the second is for the interpretation.

Note: for quantitative results, OBX-2 should be “SN” using the quantitative LOINC and for qualitative results, OBX-2 should be either “CE” or “CWE”.

cobas HCV quantitative nucleic acid test for use on the cobas 6800/8800 Systems

Not detected [260415000^Not detected^SCT]
Detected [260373001^Detected^SCT]
Below threshold level [260988000^Below threshold level^SCT]
Numeric in IU/mL
Above threshold level [260981006^Above threshold level^SCT]

Hepatitis C virus RNA [Presence] in Serum or Plasma by NAA with probe detection^LN

Hepatitis C virus RNA [Units/volume] (viral load) in Serum or Plasma by NAA with probe detection

will need to set up the test to have two OBXs, where one is for the quantitative result and the second is for the interpretation.

Note: for quantitative results, OBX-2 should be “SN” using the quantitative LOINC and for qualitative results, OBX-2 should be either “CE” or “CWE”.

cobas HCV quantitative nucleic acid test for use on the cobas 6800/8800 Systems

Not detected [260415000^Not detected^SCT]
Detected [260373001^Detected^SCT]
Below threshold level [260988000^Below threshold level^SCT]
Numeric in IU/mL
Above threshold level [260981006^Above threshold level^SCT]

Hepatitis C virus RNA [Units/volume] (viral load) in Serum or Plasma by NAA with probe detection

Hepatitis C virus RNA [Units/volume] (viral load) in Serum or Plasma by NAA with probe detection

will need to set up the test to have two OBXs, where one is for the quantitative result and the second is for the interpretation.

Note: for quantitative results, OBX-2 should be “SN” using the quantitative LOINC and for qualitative results, OBX-2 should be either “CE” or “CWE”.

Repeatedly Reactive [735269004^Repeatedly reactive (qualifier value)^SCT] - (If one or both of the duplicate retests have a COI <= 1.0)

Nonreactive [131194007^Non-Reactive^SCT] - (If both of the duplicate retests have a COI >1.0)

Hepatitis B virus core Ab [Presence] in Serum or Plasma by Immunoassay

Hepatitis B virus core Ab [Presence] in Serum or Plasma by Immunoassay

direct anterior nasal (nasal) swab (697989009^Anterior nares swab^SCT)
nasopharyngeal swab (258500001^Nasopharyngeal swab^SCT)

Influenza virus A RNA [Presence] in Upper respiratory specimen by NAA with probe detection

Influenza virus types A and B panel - Upper respiratory specimen by NAA with probe detection

ID NOW Instrument_Abbott

Respiratory system specimen.upper

direct anterior nasal (nasal) swab (697989009^Anterior nares swab^SCT)
nasopharyngeal swab (258500001^Nasopharyngeal swab^SCT)

Influenza virus B RNA [Presence] in Upper respiratory specimen by NAA with probe detection

Influenza virus types A and B panel - Upper respiratory specimen by NAA with probe detection

ID NOW Instrument_Abbott

Respiratory system specimen.upper

BioCode Gastrointestinal Pathogen Panel (GPP)

Campylobacter sp DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Clostridioides difficile toxin A+B tcdA+tcdB genes [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

Clostridioides difficile toxin A+B tcdA+tcdB genes

BioCode Gastrointestinal Pathogen Panel (GPP)

Salmonella enterica+bongori DNA [Presence] in Specimen

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

Vibrio cholerae+parahaemolyticus+vulnificus DNA

BioCode Gastrointestinal Pathogen Panel (GPP)

Vibrio parahaemolyticus DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Yersinia enterocolitica DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Escherichia coli enteroaggregative DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

Escherichia coli enteroaggregative DNA

BioCode Gastrointestinal Pathogen Panel (GPP)

Escherichia coli enterotoxigenic ltA+st1a+st1b genes [Presence] in Stool

Gastrointestinal pathogens panel - Stool by NAA with probe detection

Escherichia coli enterotoxigenic ltA+st1a+st1b genes

BioCode Gastrointestinal Pathogen Panel (GPP)

Escherichia coli Stx1 and Stx2 toxin stx1+stx2 genes [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

Escherichia coli Stx1+Stx2 toxin stx1+stx2 genes

BioCode Gastrointestinal Pathogen Panel (GPP)

Shigella species+EIEC invasion plasmid antigen H ipaH gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

Shigella species+EIEC invasion plasmid antigen H (ipaH) gene

BioCode Gastrointestinal Pathogen Panel (GPP)

Escherichia coli O157 DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Cryptosporidium parvum+hominis DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Entamoeba histolytica DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Giardia lamblia DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Adenovirus 40+41 DNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Norovirus genogroup I+II RNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

BioCode Gastrointestinal Pathogen Panel (GPP)

Rotavirus A RNA [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens panel - Stool by NAA with probe detection

Hepatitis B virus core IgM Ab [Presence] in Serum or Plasma by Immunoassay^LN

24113-3^Hepatitis B virus core IgM Ab [Presence] in Serum or Plasma by Immunoassay^LN

Hepatitis B virus core IgM Ab [Presence] in Serum or Plasma by Immunoassay^LN

24113-3^Hepatitis B virus core IgM Ab [Presence] in Serum or Plasma by Immunoassay^LN

Hepatitis B virus surface Ab [Units/volume] in Serum or Plasma by Immunoassay

Hepatitis B virus surface Ab [Units/volume] in Serum or Plasma by Immunoassay

Hepatitis B virus surface Ab [Units/volume] in Serum or Plasma by Immunoassay

Hepatitis B virus surface Ab [Units/volume] in Serum or Plasma by Immunoassay

Hepatitis B virus surface Ab [Units/volume] in Serum or Plasma by Immunoassay

Hepatitis B virus surface Ab [Units/volume] in Serum or Plasma by Immunoassay

Campylobacter coli+jejuni+upsaliensis DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Campylobacter coli+jejuni+upsaliensis DNA

tar.amp.non-probe

Clostridium difficile toxin A+B (tcdA+tcdB) genes [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Clostridium difficile toxin A+B (tcdA+tcdB) genes

tar.amp.non-probe

Plesiomonas shigelloides DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Salmonella enterica+bongori DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Yersinia enterocolitica DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Vibrio cholerae+parahaemolyticus+vulnificus DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Vibrio cholerae+parahaemolyticus+vulnificus DNA

tar.amp.non-probe

Vibrio cholerae DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Escherichia coli enteroaggregative pAA plasmid aggR+aatA genes [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Escherichia coli enteroaggregative pAA plasmid aggR+aatA genes

tar.amp.non-probe

Escherichia coli enteropathogenic eae gene [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Escherichia coli enteropathogenic eae gene

tar.amp.non-probe

Escherichia coli enterotoxigenic ltA+st1a+st1b genes [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Escherichia coli enterotoxigenic ltA+st1a+st1b genes

tar.amp.non-probe

Escherichia coli shiga-like toxin 1+2 (stx1+stx2) genes [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Escherichia coli shiga-like toxin 1+2 (stx1+stx2) genes

tar.amp.non-probe

Escherichia coli O157 DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Shigella species+EIEC invasion plasmid antigen H (ipaH) gene [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

Shigella species+EIEC invasion plasmid antigen H (ipaH) gene

tar.amp.non-probe

Cryptosporidium sp DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Cyclospora cayetanensis DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Entamoeba histolytica DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Giardia lamblia DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Adenovirus F(40+41) DNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Astrovirus subtypes 1-8 RNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Norovirus genogroup I+II RNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Rotavirus A RNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

Sapovirus genogroups I+II+IV+V RNA [Presence] in Stool by Target amplification with non-probe based detection

GI path DNA+RNA Pnl Stl Non-probe PCR

tar.amp.non-probe

multiplexed nucleic acid test

tar.amp.non-probe

(tar.amp.non-probe)

Nanosphere Enteric Pathogens (EP)

Campylobacter coli+jejuni+lari fusA gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

Campylobacter coli+jejuni+lari fusA gene

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Salmonella sp rpoD gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Shigella species+EIEC invasion plasmid antigen H ipaH gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

Shigella species+EIEC invasion plasmid antigen H (ipaH) gene

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Vibrio cholerae+parahaemolyticus rfbL+trkH+tnaA genes [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

Vibrio cholerae+parahaemolyticus rfbL+trkH+tnaA genes

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Yersinia enterocolitica recN gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Escherichia coli Stx1 toxin stx1 gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Escherichia coli Stx2 toxin stx2 gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Norovirus genogroup I+II orf1-orf2 junction region [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

Norovirus genogroup I+II orf1-orf2 junction region

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf

Nanosphere Enteric Pathogens (EP)

Rotavirus A nsp5 gene [Presence] in Stool by NAA with probe detection

Gastrointestinal pathogens identified in Stool by NAA with probe detection

Verigene Enteric Pathogens Nucleic Acid Test_Luminex Corporation

Nanosphere Verigene System_Verigene

http://www.nanosphere.us/sites/default/files/support-docs/027-00037-01_e_verigene_ep_ivd_ce_package_insert.pdf