Genome features.xlsx

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R	S	T
1	# feature	class	assembly	assembly_unit	seq_type	chromosome	genomic_accession	start	end	strand	product_accession	non-redundant_refseq	related_accession	name	symbol	GeneID	locus_tag	feature_interval_length	product_length	attributes
2	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	4883804	442	-					cooS		CLFE_RS00005	1890		old_locus_tag=CLFE_045400
3	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	4883804	442	-	WP_077851335.1	WP_077851335.1		anaerobic carbon-monoxide dehydrogenase catalytic subunit	cooS		CLFE_RS00005	1890	629
4	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	515	931	-							CLFE_RS00010	417		old_locus_tag=CLFE_000010
5	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	515	931	-	WP_077833257.1	WP_077833257.1		Rrf2 family transcriptional regulator			CLFE_RS00010	417	138
6	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	1012	1539	-							CLFE_RS00015	528		old_locus_tag=CLFE_000020
7	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	1012	1539	-	WP_077833258.1	WP_077833258.1		metal-dependent hydrolase			CLFE_RS00015	528	175
8	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	1555	2316	-							CLFE_RS00020	762		old_locus_tag=CLFE_000030
9	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	1555	2316	-	WP_077894291.1	WP_077894291.1		DeoR/GlpR family DNA-binding transcription regulator			CLFE_RS00020	762	253
10	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	2427	3164	-							CLFE_RS00025	738		old_locus_tag=CLFE_000040
11	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	2427	3164	-	WP_077833260.1	WP_077833260.1		amino acid ABC transporter ATP-binding protein			CLFE_RS00025	738	245
12	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	3161	3727	-							CLFE_RS00030	567
13	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	3161	3727	-	WP_242950826.1	WP_242950826.1		amino acid ABC transporter permease			CLFE_RS00030	567	188
14	gene	pseudogene	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	3830	4612	-							CLFE_RS00035	783		partial;pseudo
15	CDS	without_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	3830	4612	-				transporter substrate-binding domain-containing protein			CLFE_RS00035	783		partial;pseudo
16	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	4919	6487	-							CLFE_RS00040	1569		old_locus_tag=CLFE_000060
17	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	4919	6487	-	WP_077894290.1	WP_077894290.1		GTP-binding protein			CLFE_RS00040	1569	522
18	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	6499	7299	-							CLFE_RS00045	801		old_locus_tag=CLFE_000070
19	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	6499	7299	-	WP_077851332.1	WP_077851332.1		sulfate adenylyltransferase subunit 2			CLFE_RS00045	801	266
20	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	7315	8112	-							CLFE_RS00050	798		old_locus_tag=CLFE_000080
21	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	7315	8112	-	WP_077833263.1	WP_077833263.1		ABC transporter permease			CLFE_RS00050	798	265
22	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	8024	8863	-							CLFE_RS00055	840		old_locus_tag=CLFE_000090
23	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	8024	8863	-	WP_077833264.1	WP_077833264.1		ABC transporter ATP-binding protein			CLFE_RS00055	840	279
24	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	8884	9891	-							CLFE_RS00060	1008		old_locus_tag=CLFE_000100
25	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	8884	9891	-	WP_077894289.1	WP_077894289.1		aliphatic sulfonate ABC transporter substrate-binding protein			CLFE_RS00060	1008	335
26	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	9909	10223	-							CLFE_RS00065	315		old_locus_tag=CLFE_000110
27	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	9909	10223	-	WP_077894288.1	WP_077894288.1		4Fe-4S binding protein			CLFE_RS00065	315	104
28	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	10213	11892	-							CLFE_RS00070	1680		old_locus_tag=CLFE_000120
29	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	10213	11892	-	WP_077894287.1	WP_077894287.1		adenylyl-sulfate reductase subunit alpha			CLFE_RS00070	1680	559
30	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	11902	12504	-					cysC		CLFE_RS00075	603		old_locus_tag=CLFE_000130
31	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	11902	12504	-	WP_077894286.1	WP_077894286.1		adenylyl-sulfate kinase	cysC		CLFE_RS00075	603	200
32	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	12514	13743	-							CLFE_RS00080	1230		old_locus_tag=CLFE_000140
33	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	12514	13743	-	WP_077894285.1	WP_077894285.1		O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase			CLFE_RS00080	1230	409
34	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	14186	14755	-							CLFE_RS00085	570		old_locus_tag=CLFE_000150
35	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	14186	14755	-	WP_077894284.1	WP_077894284.1		DUF1062 domain-containing protein			CLFE_RS00085	570	189
36	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	14964	15938	-					hemB		CLFE_RS00090	975		old_locus_tag=CLFE_000160
37	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	14964	15938	-	WP_077894283.1	WP_077894283.1		porphobilinogen synthase	hemB		CLFE_RS00090	975	324
38	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	15955	17223	-					hemL		CLFE_RS00095	1269		old_locus_tag=CLFE_000170
39	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	15955	17223	-	WP_077894282.1	WP_077894282.1		glutamate-1-semialdehyde 2,1-aminomutase	hemL		CLFE_RS00095	1269	422
40	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	17213	18685	-					cobA		CLFE_RS00100	1473		old_locus_tag=CLFE_000180
41	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	17213	18685	-	WP_077894281.1	WP_077894281.1		uroporphyrinogen-III C-methyltransferase	cobA		CLFE_RS00100	1473	490
42	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	18675	19559	-					hemC		CLFE_RS00105	885		old_locus_tag=CLFE_000190
43	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	18675	19559	-	WP_077894280.1	WP_077894280.1		hydroxymethylbilane synthase	hemC		CLFE_RS00105	885	294
44	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	19577	20221	-							CLFE_RS00110	645		old_locus_tag=CLFE_000200
45	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	19577	20221	-	WP_077833275.1	WP_077833275.1		NAD(P)-dependent oxidoreductase			CLFE_RS00110	645	214
46	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	20179	21375	-					hemA		CLFE_RS00115	1197		old_locus_tag=CLFE_000210
47	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	20179	21375	-	WP_077894279.1	WP_077894279.1		glutamyl-tRNA reductase	hemA		CLFE_RS00115	1197	398
48	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	21539	23089	-							CLFE_RS00120	1551		old_locus_tag=CLFE_000220
49	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	21539	23089	-	WP_077894278.1	WP_077894278.1		nitrite/sulfite reductase			CLFE_RS00120	1551	516
50	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	23224	24096	+							CLFE_RS00125	873		old_locus_tag=CLFE_000230
51	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	23224	24096	+	WP_077833278.1	WP_077833278.1		LysR substrate-binding domain-containing protein			CLFE_RS00125	873	290
52	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	24091	24549	-							CLFE_RS00130	459		old_locus_tag=CLFE_000240
53	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	24091	24549	-	WP_077833279.1	WP_077833279.1		DUF441 family protein			CLFE_RS00130	459	152
54	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	24837	25850	-					ilvC		CLFE_RS00135	1014		old_locus_tag=CLFE_000250
55	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	24837	25850	-	WP_077833280.1	WP_077833280.1		ketol-acid reductoisomerase	ilvC		CLFE_RS00135	1014	337
56	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	26467	27351	-							CLFE_RS00140	885		old_locus_tag=CLFE_000260
57	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	26467	27351	-	WP_077894277.1	WP_077894277.1		polysaccharide deacetylase			CLFE_RS00140	885	294
58	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	27393	28349	-							CLFE_RS00145	957		old_locus_tag=CLFE_000270
59	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	27393	28349	-	WP_077894276.1	WP_077894276.1		2-hydroxyacid dehydrogenase			CLFE_RS00145	957	318
60	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	28365	28853	-					msrA		CLFE_RS00150	489		old_locus_tag=CLFE_000280
61	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	28365	28853	-	WP_077894275.1	WP_077894275.1		peptide-methionine (S)-S-oxide reductase MsrA	msrA		CLFE_RS00150	489	162
62	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	28905	29378	-							CLFE_RS00155	474		old_locus_tag=CLFE_000290
63	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	28905	29378	-	WP_077894274.1	WP_077894274.1		8-oxo-dGTP diphosphatase			CLFE_RS00155	474	157
64	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	29742	30341	-							CLFE_RS00160	600		old_locus_tag=CLFE_000300
65	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	29742	30341	-	WP_077833285.1	WP_077833285.1		type II toxin-antitoxin system PemK/MazF family toxin			CLFE_RS00160	600	199
66	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	30694	32721	-							CLFE_RS00165	2028		old_locus_tag=CLFE_000310
67	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	30694	32721	-	WP_077894310.1	WP_077894310.1		DUF4135 domain-containing protein			CLFE_RS00165	2028	675
68	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	32826	33551	-							CLFE_RS00170	726		old_locus_tag=CLFE_000320
69	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	32826	33551	-	WP_077833286.1	WP_077833286.1		LytTR family DNA-binding domain-containing protein			CLFE_RS00170	726	241
70	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	33554	34888	-							CLFE_RS00175	1335		old_locus_tag=CLFE_000330
71	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	33554	34888	-	WP_077894273.1	WP_077894273.1		GHKL domain-containing protein			CLFE_RS00175	1335	444
72	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	34998	35162	-							CLFE_RS00180	165		old_locus_tag=CLFE_000340
73	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	34998	35162	-	WP_077894272.1	WP_077894272.1		cyclic lactone autoinducer peptide			CLFE_RS00180	165	54
74	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	35137	35760	-							CLFE_RS00185	624		old_locus_tag=CLFE_000350
75	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	35137	35760	-	WP_077894271.1	WP_077894271.1		accessory gene regulator B family protein			CLFE_RS00185	624	207
76	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	35981	36712	+							CLFE_RS00190	732		old_locus_tag=CLFE_000360
77	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	35981	36712	+	WP_077894270.1	WP_077894270.1		CPBP family intramembrane metalloprotease			CLFE_RS00190	732	243
78	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	36690	37601	-							CLFE_RS00195	912		old_locus_tag=CLFE_000370
79	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	36690	37601	-	WP_077894269.1	WP_077894269.1		DMT family transporter			CLFE_RS00195	912	303
80	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	37949	38578	-							CLFE_RS00200	630
81	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	37949	38578	-	WP_242951666.1	WP_242951666.1		CatB-related O-acetyltransferase			CLFE_RS00200	630	209
82	gene	pseudogene	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	38657	38998	-							CLFE_RS00205	342		partial;pseudo
83	CDS	without_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	38657	38998	-				GNAT family N-acetyltransferase			CLFE_RS00205	342		partial;pseudo
84	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	39054	40202	-							CLFE_RS00210	1149		old_locus_tag=CLFE_000390
85	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	39054	40202	-	WP_242951664.1	WP_242951664.1		MFS transporter			CLFE_RS00210	1149	382
86	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	40410	41471	-							CLFE_RS00215	1062		old_locus_tag=CLFE_000400
87	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	40410	41471	-	WP_077894267.1	WP_077894267.1		acetylxylan esterase			CLFE_RS00215	1062	353
88	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	41477	42283	-							CLFE_RS00220	807		old_locus_tag=CLFE_000410
89	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	41477	42283	-	WP_077894266.1	WP_077894266.1		pentapeptide repeat-containing protein			CLFE_RS00220	807	268
90	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	42331	42798	-							CLFE_RS00225	468		old_locus_tag=CLFE_000420
91	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	42331	42798	-	WP_077894265.1	WP_077894265.1		GNAT family N-acetyltransferase			CLFE_RS00225	468	155
92	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	42800	44692	-							CLFE_RS00230	1893		old_locus_tag=CLFE_000430
93	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	42800	44692	-	WP_242951663.1	WP_242951663.1		ABC transporter permease			CLFE_RS00230	1893	630
94	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	44682	45458	-							CLFE_RS00235	777		old_locus_tag=CLFE_000440
95	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	44682	45458	-	WP_077894264.1	WP_077894264.1		ABC transporter ATP-binding protein			CLFE_RS00235	777	258
96	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	45626	46234	-							CLFE_RS00240	609		old_locus_tag=CLFE_000450
97	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	45626	46234	-	WP_077894263.1	WP_077894263.1		hypothetical protein			CLFE_RS00240	609	202
98	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	46513	47139	+							CLFE_RS00245	627		old_locus_tag=CLFE_000460
99	CDS	with_protein	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	46513	47139	+	WP_077894262.1	WP_077894262.1		L-2-amino-thiazoline-4-carboxylic acid hydrolase			CLFE_RS00245	627	208
100	gene	protein_coding	GCF_002006355.2	Primary Assembly	chromosome		NZ_CP096980.1	47161	47493	+							CLFE_RS00250	333		old_locus_tag=CLFE_000470