duneuro_parameters

	A	B	C	D	E	F	G	H	I	J
1	Modality	Parameters	sub-parameters	Possibel values	Description…. what is it ?, used by what?	default value	Tuned from GUI	All users	Advanced users	notes
2	EEG	FEM method	type	fitted, unfitted	FEM method, either fitted or unfitted, the fitted uses mesh; unfitted uses level set	fitted	yes	no	yes
3			solver_type	cg, dg, ?	either conforming (continious) Galerkin or discontinious Galerkin ?	cg	yes	no	yes
4			element_type	tetrahedron, hexahedron ,...	shape of the mesh element	tetrahedron	(implicit)	no	yes
5		only for hexa	geometry_adapted	false, true	is it related to solver_type ? Is is implicit to solver_type?	FALSE	no (implicit ?)	no	no
6			tolerance	1e-8,…	?	1.00E-08	?	no	yes
7		[electrodes]	filename	*.txt	the name of the electrode file	electrode_model.txt	no	no	no
8			type	normal	?	normal	no	no	no
9		[dipole]	filename	*.txt	the name of the dipole file	dipole_model.txt	no	no	no
10		[volume_conductor.grid]	filename	.msh, .dgf, *.geo,	the name of the head mesh model	head_model.*	no	no	no
11		[volume_conductor.tensors]	filename	cond, .knw	the name of the conductivty/tensor file	conductivity_model.*	no	no	no	The conductivity values should be specified by the user in the case of isotropy...
12		[solver]	solver_type	cg (conj gradient?), ??	?	cg	yes	no	yes
13			preconditioner_type	amg, ??	?	amg	?	no	?
14			cg_smoother_type	ssor, ??	?	ssor	?	no	?
15			intorderadd	0, ?	?	0	?	no	?
16	dg case		scheme	sipg,nipg,obb	Can allways be SIPG (only for slver_type = dg)	sipg				DG not available with venant?
17	dg case		penalty	double > 0.0	expert mode	20				DG not available with venant?
18	dg case		edge_norm_type	houston	possible values, see edge_norm_provider.hh line 320...	houston				DG not available with venant?
19	dg case		weights	true, false	?	true				DG not available with venant?
20	dg case		reduction	0.0 < double < 1.0	Not only for DG	1e-10				DG not available with venant?
21		[solution]	post_process	true, false	?	TRUE	yes	no	?
22			subtract_mean	true, false	apply average reference on the final LF, is it implicit to post_process?	FALSE	yes	no	?
23		[solution.solver]	reduction	1e-10, …	?	1.00E-10	yes	no	?
24		[solution.source_model]	type	partial_integration, venant, subtraction, ??	the fem source model,	venant	?	?	?
25			intorderadd	1,2, …,N	?	2	yes	no	?
26			intorderadd_lb	1,2, …,N	?	2	yes	no	?
27	cg case	venant case	numberOfMoments	1,2, …,N	venant computation	3	yes	no	?
28	cg case	venant case	referenceLength	1,2, …,N	venant computation	20	yes	no	?
29	cg case	venant case	weightingExponent	1,2, …,N	venant computation	1	yes	no	?
30	cg case	venant case	relaxationFactor	1e-6, …	venant computation	1.00E-06	yes	no	?
31	cg case	venant case	mixedMoments	false, true	?	FALSE	yes	no	?
32	cg case	venant case	restrict	false, true	restrict the monopoles to the current compartement	TRUE	yes	no	?
33	cg case	venant case	initialization	closest_vertex, single_element	choose seed entity for the patch, where venant has support (either a cell or a vertex)	closest_vertex	yes	no	?
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35	MEG	FEM method	type	fitted, unfitted	FEM method, either fitted or unfitted, the fitted uses mesh; unfitted uses level set	fitted	yes	no	yes
36			solver_type	cg, dg, ?	either conforming (continious) Galerkin or discontinious Galerkin ?	cg	yes	no	yes
37			element_type	tetrahedron, hexahedron ,...	shape of the mesh element	tetrahedron	(implicit)	no	yes
38		only for hexa	geometry_adapted	false, true	is it related to solver_type ? Is is implicit to solver_type?	FALSE	no (implicit ?)	no	no
39			tolerance	1e-8,…	?	1.00E-08	?	no	yes
40	~eeg	[coils]	filename	*.txt	name of the coils file	coil_model.txt	no	no	no
41	~eeg	[projections]	filename	*.txt	name of the projection file ? what is the difference to coils ?	projection_model.txt	no	no	no
42		[dipole]	filename	*.txt	the name of the dipole file	dipole_model.txt	no	no	no
43		[volume_conductor.grid]	filename	.msh, .dgf, *.geo,	the name of the head mesh model	head_model.*	no	no	no
44		[volume_conductor.tensors]	filename	cond, .knw	the name of the conductivty/tensor file	conductivity_model.*	no	no	no
45	~eeg	[meg]	intorderadd	0, ...N	?		no	no	no
46	~eeg		type	physical	?	physical	?	no	?
47		[solver]	solver_type	cg (conj gradient?), ??	?	cg	yes	no	yes
48			preconditioner_type	amg, ??	?	amg	?	no	?
49	cg case		cg_smoother_type	ssor, ??	?	ssor	?	no	?
50	dg case		dg_smoother_type	ssor, ??	?	ssor	?	no	?
51			intorderadd	0, ?	?	0	?	no	?
52	dg case		scheme	sipg,nipg,obb	Can allways be SIPG (only for slver_type = dg)	sipg				DG not available with venant?
53	dg case		penalty	double > 0.0	expert mode	20				DG not available with venant?
54	dg case		edge_norm_type	houston	possible values, see edge_norm_provider.hh line 320...	houston				DG not available with venant?
55	dg case		weights	true, false	?	true				DG not available with venant?
56	dg case		reduction	0.0 < double < 1.0	Not only for DG	1e-10				DG not available with venant?
57		[solution]	post_process	true, false	?	TRUE	yes	no	?
58			subtract_mean	true, false	apply average reference on the final LF, is it implicit to post_process?	FALSE	yes	no	?	no reference on MEG
59		[solution.solver]	reduction	1e-10, …	?	1.00E-10	no	no	?
60			intorderadd	0, ... ??	?	0	no	no	no
61		[solution.source_model]	type	partial_integration, venant, subtraction, ??	the fem source model,	venant	?	?	?
62			intorderadd	1,2, …,N	?	2	yes	no	?
63			intorderadd_lb	1,2, …,N	?	2	yes	no	?
64	cg case	venant case	numberOfMoments	1,2, …,N	venant computation	3	yes	no	?
65	cg case	venant case	referenceLength	1,2, …,N	venant computation	20	yes	no	?
66	cg case	venant case	weightingExponent	1,2, …,N	venant computation	1	yes	no	?
67	cg case	venant case	relaxationFactor	1e-6, …	venant computation	1.00E-06	yes	no	?
68	cg case	venant case	mixedMoments	false, true	?	FALSE	yes	no	?
69	cg case	venant case	restrict	false, true	restrict the monopoles to the current compartement	TRUE	yes	no	?
70	cg case	venant case	initialization	closest_vertex, single_element	choose seed entity for the patch, where venant has support (either a cell or a vertex)	closest_vertex	yes	no	?
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