| A | B | C | D | E | F | |
|---|---|---|---|---|---|---|
1 | solution | gh reference | description | drawbacks/possible issues | favored by | |
2 | 1 | https://github.com/BioSchemas/specifications/issues/652#issuecomment-1789844464 | DefinedTerm with DefinedTermSet termCode without prefix (9606, 0005515, topic_0080, 0005670) many sameAs, including identifiers.org DefinedTerm @id -> purl.bioontology if possible DefinedTermSet @id -> purl.obolibrary if possible | termCode without prefix means that care must be taken with ontologies like ECO that do not use consistently the prefix+separator (ECO:0005670, ECO_0005670) in sameAs | Ivan | |
3 | 2 | https://github.com/BioSchemas/specifications/issues/652#issuecomment-1812645370 | use termCode with prefix and all variations including only numerical part so for ECO it would be both termCode = ECO_0005670 or termCode = ECO:0005670 | Working with data, accept that you might have different formats for termCode and deal with it | Marco | |
4 | 3 | https://github.com/BioSchemas/specifications/issues/652#issuecomment-1812904987 | force identifiers.org style termSet=LUI (9606, GO:0005515, topic_0080, ECO:0005670) | do we need to add a recommended prefix with a termPrefix property? | ||
5 | 4 | none yet | as #3 but include a identifiers.org prefix to termSet = sample compact identifier (taxonomy:9606, GO:0006915, edam:topic_0080, ECO:0005670) | need to decide if prefix are case sensitive or no (identifiers.org is case sensitive) | ||
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