VGP Ordinal List
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SPECIES AOther species with support
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SuperorderOrders Latin NameOrders English NameMYA div closest relative# speciesLatin NameEnglish NameStatusSpecies IDIUCN (2016-2018)Genome SizeKrHapFunding & Sample CoordinatorsNotesLatin NameEnglish NameSpecies IDIUCNGenome SizeKrHapSample & Sequencing CoordinatorNotesLatin NameEnglish NameSpecies IDIUCNGenome SizeKrHapSample & Sequencing CoordinatorNotes
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m1AfrotheriaProboscideaElephants62.973
Elephas maximus indicus
Indian Elephant3Endangered4.03Gene Myers <gene@mpi-cbg.de> funding; sequence at MPI
Cynthia C. Steiner <csteiner@sandiegozoo.org> male samples; Chul Lee working on getting sample from Talking Korean elephant; Felix Grew <fgrewe@fieldmuseum.org> has female sample
Loxodonta africanusAfrican Bush Elephant
4
m2AfrotheriaHyracoideaHyraxes62.974Procavia capensisRock hyrax3Least Concern4.06Gene Myers <gene@mpi-cbg.de> funding; sequence at MPI
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
Heterohyrax bruceiBush hyrax
5
m3AfrotheriaSireniaDugongs and manetees644Dugong dugonDugong3Endangered4.00
Federica DiPalma <Federica.Di-Palma@earlham.ac.uk>, Beth Shapiro; sequence at RU
Trichechus manatusWest Indian manateeVulnerable4.00
Federica DiPalma <Federica.Di-Palma@earlham.ac.uk>, Beth Shapiro
Alternative species T. inunguis (Amazonian manatee); Genome size is average of measurements
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m4AfrotheriaMacroscelideaElephant shrews7517Rhynchocyon cirneiCheckered Elephant Shrew3Near Threatened 6.00Felix Grewe; sequence at RU
Sample at VGL provided by Field Museum; funding swapped from Philipping flying lemur
Elephantulus rufescensRufous elephant shrewRhynchocyon petersi
Black and rufous elephant shrew
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m5AfrotheriaAfrosoricida (Tenrecs)Tenrecs6430Microgale cowaniCowan's Shrew Tenrec3Least Concern5.00
Genome size could be 3; Allen Institute or Jarvis Funding; sequence at RU
MVZ to provide sample; swapped for Aquatic shrew
Echinops telfairiLesser hedgehog tenrec
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m6AfrotheriaAfrosoricida (Golden moles)Golden moles6421
Amblysomus hottentotus
Hottentot golden mole3Threatened5.00Allen Institute or Jarvis Funding; sequence at RU
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample. Mean genome size
Chrysochloris asiaticaCape golden mole
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m7AfrotheriaTubulidentataAardvark761Orycteropus aferAardvark3Least Concern5.0020DGene Myers <gene@mpi-cbg.de> funding; sequence at MPI
Cynthia C. Steiner <csteiner@sandiegozoo.org> has samples; Felix Grew <fgrewe@fieldmuseum.org> has male sample. Mean genome size
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m8XenarthraPilosa (Anteaters)Anteaters554
Tamandua tetradactyla
Southern tamandua 3Least Concern4.1154D
Camila Mazzoni <mazzoni@izw-berlin.de>; Gene Myers; seuquence at MPI
Myrmecophaga tridactyla
Giant anteaterVulnerable4.5060D
Felix Grew <fgrewe@fieldmuseum.org> has male sample. Eduardo Eizirik <eduardo.eizirik@pucrs.br> can possibly get a sample
mean genome sizeCyclopes didactylus
Pygmy anteater
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m9XenarthraPilosa (Sloths)Sloths556Choloepus didactylusLinnaeus's Two-Toed Sloth3Least Concern4.20
Camila Mazzoni <mazzoni@izw-berlin.de>; Gene Myers; sequence at MPI
Choloepus hoffmanniHoffmann's two-toed slothBradypus tridactylus
Pale-throated sloth
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m10XenarthraCingulataArmadillos6721
Chaetophractus vellerosus
Screaming Hairy Armadillo3Least Concern4.46
Ed Lein <edl@alleninstitute.org>; Allen Institute Funding; sequence at RU
Brain RNASeq project; Cynthia does not have enough sample for VGP
Dasypus novemcinctusNine-banded armadillo
13
m11
Supraprimates (Euarchontoglires)
Primates (Apes & OW Monkeys)Apes/OW Monkeys3025/135Homo sapiensHuman4Least Concern3.5046DErich Jarvis <ejarvis@rockefeller.edu>Trio samples in progressPan troglodytesChimpanzee
Evan Eiclher <eee@gs.washington.edu>
Clint's genome - a maleMacaca mulatta
Rhesus macaque
3.20
William Richard Stuafer <wrs@pitt.edu>; Andreas Pfenning <apfenning@cmu.edu>
Trio, make high priority, IsoSeq brain for macaque and chimpanzee
14
m12
Supraprimates (Euarchontoglires)
Primates (NW Monkeys)NW Monkeys30132Callithrix jacchusCommon marmoset4Least Concern3.4344D
Guojie Zhang <guojie.zhang@bio.ku.dk>, Erich Jarvis <ejarvis@rockefeller.edu>
Zhang - Funds; Jarvis - Trio samples
Cotton-top tamarin by Federica DiPalma and Beth Shapiro
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m13
Supraprimates (Euarchontoglires)
Primates (Tarsiers)Tarsiers6614Carlito syrichtaPhilippine tarsier3Threatened5.20Gene Myers <gene@mpi-cbg.de> funding; sequence at MPI
Cynthia C. Steiner <csteiner@sandiegozoo.org> has tissue sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample
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m14
Supraprimates (Euarchontoglires)
Primates (Loris/Galagos)Loris/Galagos5534Otolemur garnettiiNorthern greater galago3Vulnerable3.58
Ed Lein <edl@alleninstitute.org>; Allen Institute Funding; sequence at RU
Allen Institute has sampleNycticebus coucangSunda slow loris
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample
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m15
Supraprimates (Euarchontoglires)
Primates (Lemurs)Lemurs55101Lemur cattaRing-tailed lemur3Endangered3.48
Tomas Marques-Bonet <tomas.marques@upf.edu>; Tom Gilbert
mean genome size
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m16
Supraprimates (Euarchontoglires)
DermopteraColugos802Cynocephalus volansPhilippine flying lemur3Least Concern3.20Allen Institute or Jarvis Funding; Sequence at RU
Felix swapped funding for Checkered Elephant Shrew. Sending sample Jan 2020
Galeopterus variegatusSunda flying lemur
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m17
Supraprimates (Euarchontoglires)
Rodentia (Porcupines)Porcupines6029Erethizon dorsatumNorth American porcupine3Least Concern2.90Felix Grew will support
Felix Grew <fgrewe@fieldmuseum.org>; Bruce Patterson <bpatterson@fieldmuseum.org> possibly
Hystrix brachyuraMalayan porcupine
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m18
Supraprimates (Euarchontoglires)
Rodentia (Gundi/Squirrel rat)Gundi/Squirrel-rat602Ctenodactylus gundiCommon gundi3Least Concern3.50Jarvis or Allen Insitute Funding; Sequence at RUMVZ to provide sampleLaotian rock ratLaonastes aenigmamus
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m19
Supraprimates (Euarchontoglires)
Rodentia (Dormice)Dormice6029Glis glisEdible dormouse2Least Concern3.00Richard Durbin <rd@sanger.ac.uk>/Mike StrattonDarwin UK EBP, sample identifiedGraphiurus murinusWoodland dormouseLeast Concern3.50
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m20
Supraprimates (Euarchontoglires)
Rodentia (Squirrels/Chipmunks)Squirrels/Chipmunks55285Sciurus vulgarisEurasian Red Squirrel4mSciVul1.1Least Concern4.00
Daniel Mead <da2@sanger.ac.uk>, Julia Wilson, Richard Durbin
Sanger 25G projectTamias striatusEastern chipmunk
Spermophilus tridecemlineatus
Thirteen-lined ground squirrel
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m21
Supraprimates (Euarchontoglires)
Rodentia (Mountain Beaver)Mountain Beaver551Aplodontia rufaMountain Beaver2Least Concern2.70Jarvis or Allen Insitute Funding; Sequence at RU
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m22
Supraprimates (Euarchontoglires)
Rodentia (Muridae)Mice/Rats501750Arvicola amphibiusWater vole4Least Concern3.30Richard Durbin <rd@sanger.ac.uk>/Mike StrattonSanger 25G/Darwin UK EBPArvicanthis niloticusNile ratLeast Concern3.00
Yury Bukhman <YBukhman@morgridge.org>
Mus musculusHouse mouseLeast Concern2.80
Black Rat possibly by Neil Gemmell
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m23
Supraprimates (Euarchontoglires)
Rodentia (Dipodidae)Jumping mice5050Jaculus jaculusLesser Egyptian jerboa3Least Concern3.00
Gene Myers <gene@mpi-cbg.de>; funding Kim Cooper <kcooper@ucsd.edu>
Kim Cooper has trio of samples
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m24
Supraprimates (Euarchontoglires)
Rodentia (Anomaluridae)Flying squirrels557Anomalurus beecroftiBeecroft's flying squirrel2Least Concern4.00Jarvis or Allen Insitute Funding; Sequence at RU
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m25
Supraprimates (Euarchontoglires)
Rodentia (Pedetidae)Springhares552Pedetes capensisSouth African springhare3Least Concern3.50Jarvis or Allen Insitute Funding; Sequence at RU
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has sample; need to determine sex
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m26
Supraprimates (Euarchontoglires)
Rodentia (Geomyoidea)Gophers/Kangaroo rats5935/59Thomomys bottaeBotta's Pocket Gopher3Least Concern4.50Jarvis or Allen Insitute Funding; Sequence at RUMVZ to provide sampleDipodomys heermanniHeermann's kangaroo rat
Cratogeomys castanops
Yellow-faced pocket gopher
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m27
Supraprimates (Euarchontoglires)
Rodentia (Castoridae)Beavers592Castor canadensisNorth American beaver3Least Concern2.70Jarvis or Allen Insitute Funding; Sequence at RU
Cynthia C. Steiner <csteiner@sandiegozoo.org> has tissue sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample
Castor fiberEurasian beaver
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m28
Supraprimates (Euarchontoglires)
Lagomorpha (Leporidae)Rabbits/Hares4960Oryctolagus cuniculusEuropean rabbit2Near Threatened 3.00Richard Durbin <rd@sanger.ac.uk>/Mike StrattonDarwin UK EBP
31
m29
Supraprimates (Euarchontoglires)
Lagomorpha (Ochotonidae)Pikas4930Ochotona princepsAmerican Pika3Least Concern2.75Jarvis or Allen Insitute Funding; Sequence at RU
Felix Grew <fgrewe@fieldmuseum.org> has male sample
Ochotona hyperboreaNorthern Pika (Japan)
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m30
Supraprimates (Euarchontoglires)
Scandentia (Tupaiidae)Treeshrews6319Tupaia tanaLarge treeshrew3Least Concern3.20Harris Lewin funding; Sequencing UC Davis; Bionano at RUTupaia belangeriNorthern treeshrew
Jeremy Foote <jbf130@uab.edu> sent sample to Rockefeller
Tupaia minor
Pygmy treeshrew
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m31
Supraprimates (Euarchontoglires)
Scandentia (Ptilocercidae)Pen-tailed treeshrew631Ptilocercus lowiiPen-tailed treeshrew2Least Concern3.00Allen Institute or Jarvis Funding; Sequence at RU
34
m32LaurasiatheriaCetartiodactyla (Cetacea)Whales, dolphines, orcas5490Phocoena sinusVaquita4mPhoSin1
Critically Endangered
3.00
Phil Morin <phillip.morin@noaa.gov>, Barbara Taylor <barbara.taylor@noaa.gov>
Tursiops truncatusBottlenose dolphinLeast Concern3.20
Erich Jarvis <ejarvis@rockefeller.edu>; Brigid Maloney
Trio; Funds from Marcelo Magnasco, RU
Balaenoptera musculus
Blue whale
Yury Bukhman <YBukhman@morgridge.org>
Has sample and some seuencing already done
Humpback whale: Susana Caballero <sj.caballero26@uniandes.edu.co> University de Los Andes, Colombia, is providing sample
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m33LaurasiatheriaCetartiodactyla (Hippopotamidae)Hippopotamuses542
Hippopotamus amphibius
Common hippopotamus3Vulnerable3.00Gene Myers <gene@mpi-cbg.de> funding; sequence at MPI
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
Choeropsis liberiensisPygmy hippopotamus
36
m34LaurasiatheriaCetartiodactyla (non Cetacea ungulates)Giraffes/Goats/Sheep/Deers/Cow60Bos taurus
Cow (Angus/Brahman hybrid)
4Least Concern2.70
Tim Smith <Tim.Smith@ARS.USDA.GOV>, Adam Phillippy <adam.phillippy@nih.gov>
Assembled using Koren et al trio approach; Heebal Kim and Chul Lee will contribute to VGP references on pure Hanwoo Korean breed
Cervus elaphusRed deer3.24
Carlos De Cabo De La Vega <carlosd@sescam.jccm.es>
Trio
Tragulus napu or Giraffa camelopardalis
Greater mouse-deer or Giraffe
Vulnerable or Least Concern
Capra hircus Domestic goat 3.24
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m35LaurasiatheriaCetartiodactyla (Suidae)Pigs6416Sus scrofa
Pig (Central European wild boar)
3Least Concern2.70
Richard Durbin Darwin UK, Central European wild pig?: sequence Sanger
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample of Central European wild pig
Pecari tajacuCollared peccary
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m36LaurasiatheriaCetartiodactyla (Camelidae)Cammels/Llama657Camelus dromedariusArabian camel3Not evaluated2.80
COVID-19 Funds Erich. Samantha Brooks <samantha.brooks@ufl.edu>; Heather Marie Hall <heather.holl@ufl.edu>; sequence RU
Has Pacbio, 10X and mate pair illumina data; Trio on another animal; no more funds left to finish off the assembly
Lama glamaLlamaCamelus ferus
Bactrian camel (IUCN Cr, wild)
39
m37LaurasiatheriaPerissodactyla (Equidae)Horses/Donkeys/Zebras6022Equus caballusDomestic horse3Not evaluated2.70Richard Durbin Darwin UK or Allen Institute? COVID-19 funds
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
40
m38LaurasiatheriaPerissodactyla (Rhinoceratidae)Rhinoceros515Diceros bicornis minorSouthern black rhinoceros3
Critically Endangered
3.34Klaus-Peter Koepfli <KoepfliK@si.edu>; sequence RUCeratotherium simumWhite rhinoceros
Near Threatened
3.34
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
41
m39LaurasiatheriaPerissodactyla (Tapiridae)Tapirs514Tapirus indicusMalayan tapir3Endangered2.75Allen Institute or Jarvis Funding; sequence at RU
Cynthia C. Steiner <csteiner@sandiegozoo.org> has blood sample; Eduardo Eizirik <eduardo.eizirik@pucrs.br> can possibly get a sample
42
m40LaurasiatheriaChiroptera (Yangochiroptera)Regular bats651054
Phyllostomus discolor
Pale spear-nosed bat4mPhyDis1Least Concern2.52Sonja Vernes <Sonja.Vernes@mpi.nl>, Erich JarvisMyotis myotisGreater mouse-eared bat
43
m41LaurasiatheriaChiroptera (Yinpterochiroptera)Megabats65186
Rhinolophus ferrumequinum
Greater horseshoe bat4mRhiFer1Least Concern2.00Emma Teeling <emma.teeling@ucd.ie>, Gene MyersPteropus vampyrusLarge flying fox
Near Threatened
44
m42LaurasiatheriaCarnivora (Caniformia)Dog-like (Seals/Bears/Racoons)57125Lutra lutraEurasian otter4mLutLut1Near Threatened 3.00
Daniel Mead <da2@sanger.ac.uk>, Julia Wilson, Richard Durbin
Sanger 25G projectZalophus californianusCalifornia Sea LionLeast Concern3.15
Jochen Wolf <j.wolf@biologie.uni-muenchen.de>
Phoca vitulina (if find Harbor seal support, do it)
Canis familiarisDomestic dogNot evaluated
Short-tailed weasel or stoat (Mustela erminea) supported by Andrew Veil and Klaus; Black-footed ferret (Mustela nigripes) supported by Klaus; Specticuled bear (Tremarctos ornatus) supported by Federica and Beth; Grey Seal VIncent Yanik, sample
45
m43LaurasiatheriaCarnivora (Feliformia)Cat-like (Civets/Mangooses/Hyenas)57160Lynx canadensisCanada lynx4rGopEvg1Least Concern2.92
Warren Johnson <johnsonw11661@gmail.com>, Kluas Peter-Koepfli
Felis catusDomestic cat
46
m44LaurasiatheriaPholidotaPangolins808Manis pentadactylaChinese pangolin3
Critically Endangered
2.70Erich Jarvis; sequence at RU COVID-19 funds
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m45LaurasiatheriaEulipotyphla (Soricidae)Shrews66385Suncus etruscusEtruscan shrew3Least Concern2.91Yury Bukhman <YBukhman@morgridge.org>Has funding and can get sampleSorex araneusCommon shrew
48
m46LaurasiatheriaEulipotyphla (Talpidae)Moles6650Talpa europaeaEuropean mole2Least Concern2.50
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; sequence at Sanger
Darwin UK EBP
49
m47LaurasiatheriaEulipotyphla (Erinaceidae)Hedgehogs7043Erinaceus europaeusEuropean hedgehog2Least Concern3.66
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; sequence at Sanger
Darwin UK EBP
50
m48LaurasiatheriaEulipotyphla (Erinaceidae)Solenodon751Solenodon paradoxusHispaniolan solenodon2Endangered3.00Erich Jarvis; sequence at RU
51
m49MarsupialsDiprotodontia (Phalangeriformes)Possums5270
Trichosurus vulpecula
Common brushtail possum4mTriVul1Least Concern3.00Neil Gemmell <neil.gemmell@otago.ac.nz>
Neil will support cost and samples Dec 8, 2017
Cercartetus nanusEastern pygmy possumLeast Concern3.48
52
m50Marsupials
Diprotodontia (Hypsiprymnodontidae/Macropodidae)
Kangaroos/Wallabies524/43Macropus eugeniiTamar wallaby2Least Concern4.50Allen Institute or Jarvis Funding; sequence at RUAndrew VealeMacropus giganteusEastern grey kangaroo
Hypsiprymnodon moschatus
Musky rat-kangaroo
53
m51Marsupials
Diprotodontia (Phascolarctidae/Vombatiformes)
Koalas/Wombats554Phascolarctos cinereusKoala3Vulnerable3.69Rebecca Johson's assembly
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample; Contact Katherine Belov https://www.nature.com/articles/s41588-018-0153-5
Vombatus ursinusCommon wombat
54
m52MarsupialsPeramelemorphiaBandicoots/Bilbies6320Macrotis lagotisGreater bilby3Vulnerable4.30
Carolyn Hogg carolyn.hogg@sydney.edu.au and Katherine Belov <kathy.belov@sydney.edu.au>
Has samples of this and other species, some 10X and HiC
55
m53MarsupialsDasyuromorphiaTasmanian devil/Numbats/Quolls6370Sarcophilus harrisiiTasmanian devil3mSarHar1Endangered3.00Elizabeth Murchison <epm27@cam.ac.uk>
Has 60X ONT, Bionano, and 10X; needs Pacbio and HiC
Myrmecobius fasciatusNumbat
56
m54MarsupialsNotoryctemorphiaMarsupial moles662Notoryctes typhlopsSouthern marsupial mole2Least Concern3.50
Nathan Clark <nclark@pitt.edu> applying for NIH grant to fund species, Jan 2018
Genome size highly estimated on other orders near it in the tree
Notoryctes caurinusNorthern marsupial mole
57
m55MarsupialsMicrobiotheriaMonito del montes681Dromiciops gliroidesMonito del montes3Near Threatened 3.00
Gene Myers <gene@mpi-cbg.de> and Kim Cooper <kcooper@ucsd.edu> funding; Roberto Nespolo, Universidad Austral in Chile, providing sample
58
m56MarsupialsDidelphimorphiaOpossums80103Monodelphis domesticaGray short-tailed opossum3Least Concern3.50
Ed Lein <edl@alleninstitute.org>; Paul Samollow <psamollow@cvm.tamu.edu>
Paul supply trio; Allen Institute sequence
59
m57MarsupialsPaucituberculataShrew opossums857Lestoros incaIncan caenolestid3Least Concern3.50Bruce pattterson and Felix Grew funding?
Sample provided by MVZ; Swapped for Dusky caenolestid
60
m58MonotremesMonotremataPlatypuses/Echidna1805
Ornithorhynchus anatinus
Platypus4mOrnAna1Near Threatened 3.06Guojie Zhang <guojie.zhang@bio.ku.dk>All data types complete as of Feb 2018
Achyglossus aculeatus
EchidnaLeast Concern2.89
Guojie Zhang <guojie.zhang@bio.ku.dk>
61
b1Core landbirdsPasseriformes (Oscines)Songbirds29.594900Taeniopygia guttataZebra finch4
bTaeGut1, bTaeGut1
Least Concern1.2580DErich Jarvis <ejarvis@rockefeller.edu>
New reference being made of original black17 male, as well as a female genome
Corvus brachyrhynchos/ Ailurodeus buccoides
American Crow1.2580DGeospiza fortis
Medium Ground-finch
New Caledonia Crow by Neil Gemmell; Hooded Crow by Jochen Wolf <j.wolf@biologie.uni-muenchen.de>; Swainson's thrush by Kira Belmore <delmore@evolbio.mpg.de>; Grey Catbird by Per Ericson
62
b2Core landbirdsPasseriformes (Suboscines)Suboscines29.591295
Chiroxiphia lanceolata
Lanced-tailed manakin4bChiLan1Least Concern1.23
Christopher Balakrishnan <chrisbala10@gmail.com>, Erich Jarvis
RCN Manakin group supportManacus vitellinusGolden-collared manakinLeast Concern1.12
Erich Jarvis <ejarvis@rockefeller.edu>
48-bird genome source
63
b3Core landbirdsPasseriformes (Acanthisitti)New Zealand Wrens34.713Acanthisitta chlorisRifleman4bAcaChl1Least Concern1.05Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome source
64
b4Core landbirdsPsittaciformesParrots54.62378Strigops habroptilusKakapo4bStrHab1
Critically Endangered
1.31Erich Jarvis <ejarvis@rockefeller.edu>, Jason HowardNestor notabilis (Kea) alternative
Melopsittacus undulatus
Budgerigar58D
Erich Jarvis <ejarvis@rockefeller.edu>
Aratinga solstitialisSun parakeet
Tom Gilbert <tgilbert@snm.ku.dk>
65
b5Core landbirdsFalconiformesFalcons60.1665Falco rusticolusGyrfalcon4bFalRus1Least Concern1.4550D
Farooq.AlAjli@monash.edu; Qasim Ayub <qasim.ayub@monash.edu>
Has created Pacbio and HiSeq data, add 10X, Bionano, and HiC at VGL
Falco peregrinusPeregrine falcon
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; Qasim Ayub has blood sample
Darwin UK EBP / 48-bird genome original
Falco naumanni
Lesser kestrel
Trio sample (maybe has funding)
Giulio Formenti <giulio.formenti@unimi.it>
66
b6Core landbirdsCariamiformesSeriemas62.852Cariama cristataRed-legged seriema4bCarCri1Least Concern1.50Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
67
b7Core landbirdsPiciformesWoodpeckers45.32432Picoides pubescensDowny Woodpecker4bDryPub1Least Concern1.50Richard Durbin <rd@sanger.ac.uk>/Mike Stratton Darwin UK EBPPicus viridisEuropean green woodpeckerPogoniulus pusillus
Red-fronted tinkerbird
bPogPus1
Alexander N. G. Kirschel <kirschel.alexander@ucy.ac.cy>
68
b8Core landbirdsCoraciiformesBee eaters45.32168Merops nubicusCarmine bee-eater4bMerNub1Least Concern1.30Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
69
b9Core landbirdsBucerotiformesHornbills51.9673Bucorvus abyssinicusAbyssinian ground hornbill4bBucAby1Near Threatened 1.43Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
70
b10Core landbirdsTrogoniformesTrogons55.4943Trogon surrucuraSurucua trogon3Least Concern1.40Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome originalApaloderma vittatumBar-tailed trogon
71
b11Core landbirdsLeptosomiiformesCuckoo-roller58.691Leptosomus discolorCuckoo-roller3Least Concern1.15Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
72
b12Core landbirdsColiiformesMousebirds60.366Colius striatusSpeckled mousebird3Least Concern1.50
Alex Suh <alexander.suh@ebc.uu.se> is paying for; Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
73
b13Core landbirdsStrigiformesOwls62.09224Tyto albaBarn owl3Least Concern1.5092DRichard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original; Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
74
b14Core landbirdsAccipitriformesEagles/Osprey60.41227Aquila chrysaetosEuropean golden eagle4bAquChr1Least Concern
Daniel Mead <da2@sanger.ac.uk>, Julia Wilson, Richard Durbin
Sanger 25G project
Haliaeetus leucocephalus
Bald EagleLeast Concern1.4366D
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original, Haliaeetus albicilla - White-tailed Eagle alternative
Pandion cristatusEastern Osprey
75
b15Core landbirdsCathartiformesVultures/Secretary bird60.418Gypaetus barbatusBearded vulture3Least Concern1.60Tomas Marques <tomas.marques@upf.edu> funding48-bird genome originalCathartes auraTurkey vulture
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome originalSagittarius serpentariusSecretarybird
76
b16Core waterbirdsPelecaniformes (Pelecanidae)Pelicans55.0210Pelecanus crispusDalmatian pelican3Vulnerable1.30Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
77
b17Core waterbirdsPelicaniformes (Ardeidae)Herons55.0266Egretta garzettaLittle egret2Least Concern1.3066DRichard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original; possible sample from Denis Larkin
78
b18Core waterbirdsPelicaniformes (Threskiornithidae)Ibises57.6534Theristicus caerulescensplumbeous ibis3Endangered1.2068DTom Gilbert <tgilbert@snm.ku.dk>, Erich JarvisNipponia nipponCrested ibis
79
b19Core waterbirdsPelicaniformes (Phalacrocoracidae)Cormorants/Anhinga59.444Phalacrocorax carboGreat cormorant3Least Concern1.40Richard Durbin <rd@sanger.ac.uk>/Mike Stratton Darwin UK EBP / 48-bird genome original
80
b20Core waterbirdsSuliformesFrigatebirds/Sula53.2515Morus bassanusNorthern gannet2Least Concern1.2Richard Durbin <rd@sanger.ac.uk>/Mike Stratton Darwin UK EBP / 48-bird genome originalFregata magnificensMagnificent FrigatebirdLeast Concern1.20Sula nebouxii
Blue-footed booby
81
b21Core waterbirdsCiconiiformesStorks59.8719Ciconia maguariMaguari stork4Least Concern1.54Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
82
b22Core waterbirdsProcellariiformesFulmars60.46135Fulmarus glacialisNorthern fulmar3Least Concern1.14Richard Durbin <rd@sanger.ac.uk>/Mike Stratton Darwin UK EBP / 48-bird genome original
83
b23Core waterbirdsSphenisciformesPenguins60.4618Aptenodytes forsteriEmperor penguin3Near Threatened 1.6072D
Guojie Zhang <guojie.zhang@bio.ku.dk>, Tom Gilbert, Erich Jarvis
Funds and samplesSpheniscus humboldtiHumboldt penguinUnknown1.60
Guojie Zhang <guojie.zhang@bio.ku.dk>, Tom Gilbert, Erich Jarvis
Funds and samplesEudyptes chrysocome
Southern rockhopper penguin
Unknown
Guojie Zhang <guojie.zhang@bio.ku.dk>, Tom Gilbert, Erich Jarvis
Funds and samples
84
b24Core waterbirdsGaviiformesLoons63.885Gavia stellataRed-throated Loon3Least Concern1.15Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
85
b25Core waterbirdsPhaethontiformesTropicbirds60.813Phaethon lepturusWhite-tailed tropicbird3Least Concern1.16Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
86
b26Core waterbirdsEurypgiformesSunbittern/Kagu60.812Eurypyga heliasSunbittern3Least Concern1.10Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome originalRhynochetos jubatusKagu
87
b27Core waterbirdsCharadriiformesPlovers65.56377Pluvialis apricariaEurasian golden Plover4Least Concern1.2076D
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; in progress at Rockefeller
Darwin UK EBP / 48-bird genome originalAlca TordaRazorbillbAlcTor1
Near Threatened
1.20
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
Sterna hirundoCommon tern
MIriam Liedvogel <liedvogel@evolbio.mpg.de>
Also try to sequence: Charadrius vociferus (Killdeer)
88
b28Core waterbirdsGruiformesCranes65.56163
Balearica regulorum gibbericeps
Grey crowned-crane4bBalReg1Endangered1.40Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
89
b29Core waterbirdsOpisthocomiformesHoatzin67.371Opisthocomus hoazinHoatzin2Least Concern1.14Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
90
b30CaprimulgimorphaeTrochiliformesHummingbirds45.4340Calypte annaAnna's hummingbird4bCalAnn1Least Concern1.1474DErich Jarvis <ejarvis@rockefeller.edu>48-bird genome original
91
b31CaprimulgimorphaeApodiformesSwifts45.4105Apus apusCommon swift3Least Concern1.2
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; Giulio Formenti <giulio.formenti@unimi.it> has female blood sample of wild animal
Darwin UK EBP / 48-bird genome originalChaetura pelagicaChimney Swift
Near Threatened
1.10
92
b32CaprimulgimorphaeApodiformes (Hemiprocnidae)Whiskered treeswift49.384Hemiprocne comataWhiskered treeswift3Least Concern1.20Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
93
b33CaprimulgimorphaeCaprimulgiformesNightjars64.1193Caprimulgus europaeusEurasian nightjar3Least Concern1.2
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; Giulio Formenti <giulio.formenti@unimi.it> has female blood sample from wild animal
Darwin UK EBP / 48-bird genome original
Antrostomus carolinensis
Chuck-will's-widowLeast Concern1.30
94
b34CaprimulgimorphaeCaprimulgiformes (Aegothelidae)Owlet nightjars56.6210Aegotheles insignisBarred owlet-nightjar2Least Concern1.30Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
95
b35CaprimulgimorphaeCaprimulgiformes (Podargidae)Frogmouths59.9616Podargus strigoidesTawny frogmouth3Least Concern1.20Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
96
b36CaprimulgimorphaeCaprimulgiformes (Steatornithidae)Oilbird54.721Steatornis caripensisOilbird2Least Concern1.20Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
97
b37CaprimulgimorphaeCaprimulgiformes (Nyctibiidae)Potoos54.727Nyctibius grandisGreat potoo4Least Concern1.20Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
98
b38OtidimorphaeOtidiformesBustards62.9226Otis tardaGreat bustard3Vulnerable1.40
Scott Edwards <sedwards@fas.harvard.edu> will support a bustard; Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
Chlamydotis macqueenii
MacQueen's bustard
99
b39OtidimorphaeMusophagiformesTuracos62.9223
Tauraco erythrolophus
Red-crested turaco4bTauEry1Least Concern1.17Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis48-bird genome original
100
b40OtidimorphaeCuculiformesCuckoos66.27147Cuculus canorusCommon cuckoo3Least Concern1.40
Jochen Wolf <j.wolf@biologie.uni-muenchen.de>; Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
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