VGP Ordinal List
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SPECIES ASPECIES BOther species with support
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SuperorderOrders Latin NameOrders English NameMYA div closest relative# speciesLatin NameEnglish NameStatusSpecies IDIUCN (2016-2018)Genome SizeKrHapFunding & Sample CoordinatorsNotesLatin NameEnglish NameSpecies IDIUCNGenome SizeKrHapSample & Sequencing CoordinatorNotesLatin NameEnglish NameSpecies IDIUCNGenome SizeKrHapSample & Sequencing CoordinatorNotes
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m1AfrotheriaProboscideaElephants62.973Elephas maximusAsian Elephant3Endangered4.03
Gene Myers <gene@mpi-cbg.de> funding
Cynthia C. Steiner <csteiner@sandiegozoo.org> has samples; Chul Lee working on getting sample from Talking Korean elephant; Felix Grew <fgrewe@fieldmuseum.org> has female sample
Loxodonta africanusAfrican Bush Elephant
4
m2AfrotheriaHyracoideaHyraxes62.974Procavia capensisRock hyrax1Least Concern4.06
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
Heterohyrax bruceiBush hyrax
5
m3AfrotheriaSireniaDugongs and manetees644Dugong dugonDugong3Endangered4.00
Federica DiPalma <Federica.Di-Palma@earlham.ac.uk>, Beth Shapiro
Trichechus manatusWest Indian manateeVulnerable4.00
Federica DiPalma <Federica.Di-Palma@earlham.ac.uk>, Beth Shapiro
Alternative species T. inunguis (Amazonian manatee); Genome size is average of measurements
6
m4AfrotheriaMacroscelideaElephant shrews7517Rhynchocyon cirneiCheckered Elephant Shrew0Near Threatened 6.00
Felix Grew <fgrewe@fieldmuseum.org> has female sample
Elephantulus rufescensRufous elephant shrewRhynchocyon petersi
Black and rufous elephant shrew
7
m5AfrotheriaAfrosoricida (Tenrecs)Tenrecs6430Limnogale mergulusAquatic Tenrec0Vulnerable5.00
Felix Grew <fgrewe@fieldmuseum.org> has female sample
Echinops telfairiLesser hedgehog tenrec
8
m6AfrotheriaAfrosoricida (Golden moles)Golden moles6421
Amblysomus hottentotus
Hottentot golden mole0Threatened5.00
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample. Mean genome size
Chrysochloris asiaticaCape golden mole
9
m7AfrotheriaTubulidentataAardvark761Orycteropus aferAardvark1Least Concern5.0020D
Cynthia C. Steiner <csteiner@sandiegozoo.org> has samples; Felix Grew <fgrewe@fieldmuseum.org> has male sample. Mean genome size
10
m8XenarthraPilosa (Anteaters)Anteaters554
Tamandua tetradactyla
Southern tamandua 3Least Concern4.1154D
Camila Mazzoni <mazzoni@izw-berlin.de>; Gene Myers
Myrmecophaga tridactyla
Giant anteaterVulnerable4.5060D
Felix Grew <fgrewe@fieldmuseum.org> has male sample. Eduardo Eizirik <eduardo.eizirik@pucrs.br> can possibly get a sample
mean genome sizeCyclopes didactylus
Pygmy anteater
11
m9XenarthraPilosa (Sloths)Sloths556Choloepus didactylusLinnaeus's Two-Toed Sloth3Least Concern4.20
Camila Mazzoni <mazzoni@izw-berlin.de>; Gene Myers
Choloepus hoffmanniHoffmann's two-toed slothBradypus tridactylus
Pale-throated sloth
12
m10XenarthraCingulataArmadillos6721
Chaetophractus vellerosus
Screaming Hairy Armadillo1Least Concern4.46
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
Dasypus novemcinctusNine-banded armadillo
13
m11
Supraprimates (Euarchontoglires)
Primates (Apes & OW Monkeys)Apes/OW Monkeys3025/135Homo sapiensHuman3Least Concern3.5046D
Erich Jarvis <ejarvis@rockefeller.edu>
Trio samples in progressPan troglodytesChimpanzee
Evan Eiclher <eee@gs.washington.edu>
Clint's genome - a maleMacaca mulatta
Rhesus macaque
3.20
William Richard Stuafer <wrs@pitt.edu>; Andreas Pfenning <apfenning@cmu.edu>
Trio, make high priority, IsoSeq brain for macaque and chimpanzee
14
m12
Supraprimates (Euarchontoglires)
Primates (NW Monkeys)NW Monkeys30132Callithrix jacchusCommon marmoset3Least Concern3.4344D
Guojie Zhang <guojie.zhang@bio.ku.dk>, Erich Jarvis <ejarvis@rockefeller.edu>
Zhang - Funds; Jarvis - Trio samples
Cotton-top tamarin by Federica DiPalma and Beth Shapiro
15
m13
Supraprimates (Euarchontoglires)
Primates (Tarsiers)Tarsiers6614Carlito syrichtaPhilippine tarsier1Threatened5.20
Cynthia C. Steiner <csteiner@sandiegozoo.org> has tissue sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample
16
m14
Supraprimates (Euarchontoglires)
Primates (Loris/Galagos)Loris/Galagos5534Nycticebus coucangSunda slow loris1Vulnerable3.58
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample
Otolemur garnettiiNorthern greater galago
17
m15
Supraprimates (Euarchontoglires)
Primates (Lemurs)Lemurs55101Lemur cattaRing-tailed lemur3Endangered3.48
Tomas Marques-Bonet <tomas.marques@upf.edu>; Tom Gilbert
mean genome size
18
m16
Supraprimates (Euarchontoglires)
DermopteraColugos802Cynocephalus volansPhilippine flying lemur1Least Concern3.20
Felix Grew <fgrewe@fieldmuseum.org> has male sample
Galeopterus variegatusSunda flying lemur
19
m17
Supraprimates (Euarchontoglires)
Rodentia (Porcupines)Porcupines6029Erethizon dorsatumNorth American porcupine3Least Concern2.90Felix Grew will support?
Felix Grew <fgrewe@fieldmuseum.org>; Bruce Patterson <bpatterson@fieldmuseum.org> possibly
Hystrix brachyuraMalayan porcupine
20
m18
Supraprimates (Euarchontoglires)
Rodentia (Gundi/Squirrel rat)Gundi/Squirrel-rat602Ctenodactylus gundiCommon gundi0Least Concern3.50Laotian rock ratLaonastes aenigmamus
21
m19
Supraprimates (Euarchontoglires)
Rodentia (Dormice)Dormice6029Glis glisEdible dormouse2Least Concern3.00
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP, sample identified
Graphiurus murinusWoodland dormouseLeast Concern3.50
22
m20
Supraprimates (Euarchontoglires)
Rodentia (Squirrels/Chipmunks)Squirrels/Chipmunks55285Sciurus vulgarisEurasian Red Squirrel3Least Concern4.00
Daniel Mead <da2@sanger.ac.uk>, Julia Wilson, Richard Durbin
Sanger 25G projectTamias striatusEastern chipmunk
Spermophilus tridecemlineatus
Thirteen-lined ground squirrel
23
m21
Supraprimates (Euarchontoglires)
Rodentia (Mountain Beaver)Mountain Beaver551Aplodontia rufaMountain Beaver0Least Concern2.70
24
m22
Supraprimates (Euarchontoglires)
Rodentia (Muridae)Mice/Rats501750Arvicola amphibiusWater vole3Least Concern3.30
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Sanger 25G/Darwin UK EBP
Rattus rattusBlack RatLeast Concern3.00
Neil Gemmell <neil.gemmell@otago.ac.nz>
Max Planck Science of Human History has N50 110M scaffold assembly. Need to know N50 contig, and if this really meets the G10K metric
Mus musculusHouse mouseLeast Concern2.80
25
m23
Supraprimates (Euarchontoglires)
Rodentia (Dipodidae)Jumping mice5050Jaculus jaculusLesser Egyptian jerboa3Least Concern3.00
Gene Myers <gene@mpi-cbg.de>; funding Kim Cooper <kcooper@ucsd.edu>
Kim Cooper aas trio of samples
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m24
Supraprimates (Euarchontoglires)
Rodentia (Anomaluridae)Flying squirrels557Anomalurus beecroftiBeecroft's flying squirrel0Least Concern4.00
27
m25
Supraprimates (Euarchontoglires)
Rodentia (Pedetidae)Springhares552Pedetes capensisSouth African springhare1Least Concern3.50
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has sample; need to determine sex
28
m26
Supraprimates (Euarchontoglires)
Rodentia (Geomyoidea)Gophers/Kangaroo rats5935/59Thomomys bottaeBotta's Pocket Gopher1Least Concern4.50
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
Dipodomys heermanniHeermann's kangaroo rat
Cratogeomys castanops
Yellow-faced pocket gopher
29
m27
Supraprimates (Euarchontoglires)
Rodentia (Castoridae)Beavers592Castor canadensisNorth American beaver1Least Concern2.70
Cynthia C. Steiner <csteiner@sandiegozoo.org> has tissue sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample
Castor fiberEurasian beaver
30
m28
Supraprimates (Euarchontoglires)
Lagomorpha (Leporidae)Rabbits/Hares4960Oryctolagus cuniculusEuropean rabbit2Near Threatened 3.00
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP
31
m29
Supraprimates (Euarchontoglires)
Lagomorpha (Ochotonidae)Pikas4930Ochotona princepsAmerican Pika1Least Concern2.75
Felix Grew <fgrewe@fieldmuseum.org> has male sample
Ochotona hyperboreaNorthern Pika (Japan)
32
m30
Supraprimates (Euarchontoglires)
Scandentia (Tupaiidae)Treeshrews6319Tupaia belangeriNorthern treeshrew1Least Concern3.20
Jeremy Foote<jbf130@uab.edu> sent sample to Rockefeller
Tupaia minorPygmy treeshrew
33
m31
Supraprimates (Euarchontoglires)
Scandentia (Ptilocercidae)Pen-tailed treeshrew631Ptilocercus lowiiPen-tailed treeshrew0Least Concern3.00
34
m32LaurasiatheriaCetartiodactyla (Cetacea)Whales, dolphines, orcas5490Phocoena sinusVaquita4
Critically Endangered
3.00
Phil Morin <phillip.morin@noaa.gov>, Barbara Taylor <barbara.taylor@noaa.gov>
Tursiops truncatusBottlenose dolphinLeast Concern3.20
Erich Jarvis <ejarvis@rockefeller.edu>; Brigid Maloney
Trio; Funds from Marcelo Magnasco, RU
Balaenoptera musculus
Blue whale
Yury Bukhman <YBukhman@morgridge.org>
Has sample and some seuencing already done
Humpback whale: Susana Caballero <sj.caballero26@uniandes.edu.co> University de Los Andes, Colombia, is providing sample
35
m33LaurasiatheriaCetartiodactyla (Hippopotamidae)Hippopotamuses542
Hippopotamus amphibius
Common hippopotamus1Vulnerable3.00
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
Choeropsis liberiensisPygmy hippopotamus
36
m34LaurasiatheriaCetartiodactyla (non Cetacea ungulates)Giraffes/Goats/Sheep/Deers/Cow60Bos taurus
Cow (Angus/Brahman hybrid)
3Least Concern2.70
Tim Smith <Tim.Smith@ARS.USDA.GOV>, Adam Phillippy <adam.phillippy@nih.gov>
Assembled using Koren et al trio approach; Heebal Kim and Chul Lee will contribute to VGP references on pure Hanwoo Korean breed
Cervus elaphusRed deer3.24
Carlos De Cabo De La Vega <carlosd@sescam.jccm.es>
Trio
Tragulus napu or Giraffa camelopardalis
Greater mouse-deer or Giraffe
Vulnerable or Least Concern
Capra hircus Domestic goat 3.24
37
m35LaurasiatheriaCetartiodactyla (Suidae)Pigs6416Sus scrofaPig1Least Concern2.70
Richard Durbin Darwin UK, Central European wild pig?
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample of Central European wild pig
Pecari tajacuCollared peccary
38
m36LaurasiatheriaCetartiodactyla (Camelidae)Cammels/Llama657
Camelus dromedarius
Arabian camel3Not evaluated2.80
Samantha Brooks <samantha.brooks@ufl.edu>; Heather Marie Hall <heather.holl@ufl.edu>
Has Pacbio, 10X and mate pair illumina data; Trio on another animal
Lama glamaLlamaCamelus ferus
Bactrian camel (IUCN Cr, wild)
39
m37LaurasiatheriaPerissodactyla (Equidae)Horses/Donkeys/Zebras6022Equus caballusDomestic horse1Not evaluated2.70Richard Durbin Darwin UK?
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
40
m38LaurasiatheriaPerissodactyla (Rhinoceratidae)Rhinoceros515Ceratotherium simumWhite rhinoceros1Near Threatened 3.34
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
41
m39LaurasiatheriaPerissodactyla (Tapiridae)Tapirs514Tapirus indicusMalayan tapir1Endangered2.75
Cynthia C. Steiner <csteiner@sandiegozoo.org> has blood sample; Eduardo Eizirik <eduardo.eizirik@pucrs.br> can possibly get a sample
42
m40LaurasiatheriaChiroptera (Yangochiroptera)Regular bats651054
Phyllostomus discolor
Pale spear-nosed bat4mPhyDis1Least Concern2.52
Sonja Vernes <Sonja.Vernes@mpi.nl>, Erich Jarvis
Myotis myotisGreater mouse-eared bat
43
m41LaurasiatheriaChiroptera (Yinpterochiroptera)Megabats65186
Rhinolophus ferrumequinum
Greater horseshoe bat4mRhiFer1Least Concern2.00
Emma Teeling <emma.teeling@ucd.ie>, Gene Myers
Pteropus vampyrusLarge flying fox
Near Threatened
44
m42LaurasiatheriaCarnivora (Caniformia)Dog-like (Seals/Bears/Racoons)57125Lutra lutraEurasian otter3Near Threatened 3.00
Daniel Mead <da2@sanger.ac.uk>, Julia Wilson, Richard Durbin
Sanger 25G projectZalophus californianusCalifornia Sea LionLeast Concern3.15
Jochen Wolf <j.wolf@biologie.uni-muenchen.de>
Phoca vitulina (if find Harbor seal support, do it)
Canis familiarisDomestic dogNot evaluated
Short-tailed weasel or stoat (Mustela erminea) supported by Andrew Veil and Klaus; Black-footed ferret (Mustela nigripes) supported by Klaus; Specticuled bear (Tremarctos ornatus) supported by Federica and Beth
45
m43LaurasiatheriaCarnivora (Feliformia)Cat-like (Civets/Mangooses/Hyenas)57160Lynx canadensisCanada lynx4rGopEvg1Least Concern2.92
Warren Johnson <johnsonw11661@gmail.com>, Kluas Peter-Koepfli
Felis catusDomestic cat
Grey Seal VIncent Yanik, sample
46
m44LaurasiatheriaPholidotaPangolins808Manis pentadactylaChinese pangolin1
Critically Endangered
2.70
47
m45LaurasiatheriaEulipotyphla (Soricidae)Shrews66385Suncus etruscusEtruscan shrew3Least Concern2.91
Yury Bukhman <YBukhman@morgridge.org>
Has funding and can get sample
Sorex araneusCommon shrew
48
m46LaurasiatheriaEulipotyphla (Talpidae)Moles6650Talpa europaeaEuropean mole2Least Concern2.50
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP
49
m47LaurasiatheriaEulipotyphla (Erinaceidae)Hedgehogs7043Erinaceus europaeusEuropean hedgehog2Least Concern3.66
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP
50
m48LaurasiatheriaEulipotyphla (Erinaceidae)Solenodon751Solenodon paradoxusHispaniolan solenodon0Endangered3.00
51
m49MarsupialsDiprotodontia (Phalangeriformes)Possums5270
Trichosurus vulpecula
Common brushtail possum3Least Concern3.00
Neil Gemmell <neil.gemmell@otago.ac.nz>
Neil will support cost and samples Dec 8, 2017
Cercartetus nanusEastern pygmy possumLeast Concern3.48
52
m50Marsupials
Diprotodontia (Hypsiprymnodontidae/Macropodidae)
Kangaroos/Wallabies524/43Macropus eugeniiTamar Wallaby1Least Concern4.50Andrew VealeMacropus giganteusEastern grey kangaroo
Hypsiprymnodon moschatus
Musky rat-kangaroo
53
m51MarsupialsDiprotodontia (Phascolarctidae/Vombatiformes)Koalas/Wombats554Phascolarctos cinereusKoala1Vulnerable3.69
Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample; Felix Grew <fgrewe@fieldmuseum.org> has male sample; Contact Katherine Belov https://www.nature.com/articles/s41588-018-0153-5
Vombatus ursinusCommon wombat
54
m52MarsupialsPeramelemorphiaBandicoots/Bilbies6320Echymipera kalubuCommon echymipera1Least Concern4.30
Katherine Belov <kathy.belov@sydney.edu.au>
Has samples of this and other species, some 10X and HiC
Macrotis lagotisGreater bilbyVulnerable
55
m53MarsupialsDasyuromorphiaTasmanian devil/Numbats/Quolls6370Sarcophilus harrisiiTasmanian devil3Endangered3.00
Elizabeth Murchison <epm27@cam.ac.uk>
Has 60X ONT, Bionano, and 10X; needs Pacbio and HiC
Myrmecobius fasciatusNumbat
56
m54MarsupialsNotoryctemorphiaMarsupial moles662Notoryctes typhlopsSouthern marsupial mole0Least Concern3.50
Nathan Clark <nclark@pitt.edu> applying for NIH grant to fund species, Jan 2018
Genome size highly estimated on other orders near it in the tree
Notoryctes caurinusNorthern marsupial mole
57
m55MarsupialsMicrobiotheriaMonito del montes681Dromiciops gliroidesMonito del montes3Near Threatened 3.00
Gene Myers <gene@mpi-cbg.de> and Kim Cooper <kcooper@ucsd.edu> funding; Roberto Nespolo, Universidad Austral in Chile, providing sample
58
m56MarsupialsDidelphimorphiaOpossums80103Monodelphis domesticaGray short-tailed opossum0Least Concern3.50
59
m57MarsupialsPaucituberculataShrew opossums857Caenolestes fuliginosusDusky caenolestid0Least Concern3.50
Genome size highly estimated on other orders near it in the tree
60
m58MonotremesMonotremataPlatypuses/Echidna1805
Ornithorhynchus anatinus
Platypus4mOrnAna1Near Threatened 3.06
Guojie Zhang <guojie.zhang@bio.ku.dk>
All data types complete as of Feb 2018
Achyglossus aculeatus
EchidnaLeast Concern2.89
Guojie Zhang <guojie.zhang@bio.ku.dk>
61
b1Core landbirdsPasseriformes (Oscines)Songbirds29.594900Taeniopygia guttataZebra finch4
bTaeGut1, bTaeGut1
Least Concern1.2580D
Erich Jarvis <ejarvis@rockefeller.edu>
New reference being made of original black17 male, as well as a female genome
Corvus brachyrhynchos/ Ailurodeus buccoides
American Crow1.2580DGeospiza fortis
Medium Ground-finch
New Caledonia Crow by Neil Gemmell; Hooded Crow by Jochen Wolf <j.wolf@biologie.uni-muenchen.de>; Swainson's thrush by Kira Belmore <delmore@evolbio.mpg.de>; Grey Catbird by Per Ericson
62
b2Core landbirdsPasseriformes (Suboscines)Suboscines29.591295
Chiroxiphia lanceolata
Lanced-tailed manakin3Least Concern1.23
Christopher Balakrishnan <chrisbala10@gmail.com>, Erich Jarvis
RCN Manakin group support
Manacus vitellinusGolden-collared manakinLeast Concern1.12
Erich Jarvis <ejarvis@rockefeller.edu>
48-bird genome source
63
b3Core landbirdsPasseriformes (Acanthisitti)New Zealand Wrens34.713Acanthisitta chlorisRifleman3Least Concern1.05
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome source
64
b4Core landbirdsPassitaciformesParrots54.62378Strigops habroptilusKakapo4bStrHab1
Critically Endangered
1.31
Erich Jarvis <ejarvis@rockefeller.edu>, Jason Howard
Nestor notabilis (Kea) alternative
Melopsittacus undulatus
Budgerigar58D
Erich Jarvis <ejarvis@rockefeller.edu>
Aratinga solstitialisSun parakeet
Tom Gilbert <tgilbert@snm.ku.dk>
65
b5Core landbirdsFalconiformesFalcons60.1665Falco peregrinusPeregrine falcon3Least Concern1.4550D
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; Qasim Ayub has blood sample
Darwin UK EBP / 48-bird genome original
Falco rusticolusGyrfalcon
Qasim Ayub <qasim.ayub@monash.edu>
Has created Pacbio and HiSeq data, needs to add 10X, Bionano, and HiC
Falco naumanniLesser kestrel
Trio sample (maybe has funding)
Giulio Formenti <giulio.formenti@unimi.it>
66
b6Core landbirdsCariaformersSeriemas62.852Cariama cristataRed-legged seriema3Least Concern1.50
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
67
b7Core landbirdsPiciformesWoodpeckers45.32432Picus viridisEuropean green woodpecker2Least Concern1.50
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBPPicoides pubescensDowny WoodpeckerLeast Concern1.5048-bird genome original
68
b8Core landbirdsCoraciiformesBee eaters45.32168Merops nubicusCarmine bee-eater4Least Concern1.30
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
69
b9Core landbirdsBucerotiformesHornbills51.9673Bucorvus abyssinicusAbyssinian ground hornbill4Near Threatened 1.43
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
70
b10Core landbirdsTrogoniformesTrogons55.4943Apaloderma vittatumBar-tailed trogon3Least Concern1.40
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
71
b11Core landbirdsLeptosomiiformesCuckoo-roller58.691Leptosomus discolorCuckoo-roller3Least Concern1.15
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
72
b12Core landbirdsColiiformesMousebirds60.366Colius striatusSpeckled mousebird3Least Concern1.50
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
73
b13Core landbirdsStrigiformesOwls62.09224Tyto albaBarn owl3Least Concern1.5092D
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original; Cynthia C. Steiner <csteiner@sandiegozoo.org> has cell culture sample
74
b14Core landbirdsAccipitriformesEagles/Osprey60.41227Aquila chrysaetosEuropean golden eagle4bAquChr1Least Concern
Daniel Mead <da2@sanger.ac.uk>, Julia Wilson, Richard Durbin
Sanger 25G project
Haliaeetus leucocephalus
Bald EagleLeast Concern1.4366D
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original, Haliaeetus albicilla - White-tailed Eagle alternative
Pandion cristatusEastern Osprey
75
b15Core landbirdsCathartiformesVultures/Secretary bird60.418Cathartes auraTurkey vulture3Least Concern1.60
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome originalSagittarius serpentariusSecretarybird
76
b16Core waterbirdsCathartiformesPelicans55.0210Pelecanus crispusDalmatian pelican3Vulnerable1.30
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
77
b17Core waterbirdsPelicaniformes (Ardeidae)Herons55.0266Egretta garzettaLittle egret2Least Concern1.3066D
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original; possible sample from Denis Larkin
78
b18Core waterbirdsPelicaniformes (Threskiornithidae)Ibises57.6534Nipponia nipponCrested ibis2Endangered1.2068D
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
79
b19Core waterbirdsPelicaniformes (Phalacrocoracidae)Cormorants/Anhinga59.444Phalacrocorax carboGreat cormorant3Least Concern1.40
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original
80
b20Core waterbirdsSuliformesFrigatebirds/Sula53.2515Morus bassanusNorthern gannet2Least Concern1.2
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original
Fregata magnificensMagnificent FrigatebirdLeast Concern1.20Sula nebouxii
Blue-footed booby
81
b21Core waterbirdsCiconiiformesStorks59.8719Ciconia maguariMaguari stork2Least Concern1.54
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
82
b22Core waterbirdsProcellariiformesFulmars60.46135Fulmarus glacialisNorthern fulmar3Least Concern1.14
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original
83
b23Core waterbirdsSphenisciformesPenguins60.4618Aptenodytes forsteriEmperor penguin3Near Threatened 1.6072D
Guojie Zhang <guojie.zhang@bio.ku.dk>, Tom Gilbert, Erich Jarvis
Funds and samplesSpheniscus humboldtiHumboldt penguinUnknown1.60
Guojie Zhang <guojie.zhang@bio.ku.dk>, Tom Gilbert, Erich Jarvis
Funds and samplesEudyptes chrysocome
Southern rockhopper penguin
Unknown
Guojie Zhang <guojie.zhang@bio.ku.dk>, Tom Gilbert, Erich Jarvis
Funds and samples
84
b24Core waterbirdsGaviiformesLoons63.885Gavia stellataRed-throated Loon3Least Concern1.15
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
85
b25Core waterbirdsPhaethontiformesTropicbirds60.813Phaethon lepturusWhite-tailed tropicbird3Least Concern1.16
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
86
b26Core waterbirdsEurypgiformesSunbittern/Kagu60.812Eurypyga heliasSunbittern3Least Concern1.10
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome originalRhynochetos jubatusKagu
87
b27Core waterbirdsCharadriiformesPlovers65.56377Pluvialis apricariaEurasian golden Plover2Least Concern1.2076D
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton
Darwin UK EBP / 48-bird genome original
Alca TordaRazorbill
Near Threatened
1.20
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
Sterna hirundoCommon tern
MIriam Liedvogel <liedvogel@evolbio.mpg.de>
Also try to sequence: Charadrius vociferus (Killdeer)
88
b28Core waterbirdsGruiformesCranes65.56163
Balearica regulorum gibbericeps
Grey crowned-crane3Endangered1.40
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
89
b29Core waterbirdsOpisthocomiformesHoatzin67.371Opisthocomus hoazinHoatzin2Least Concern1.14
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
90
b30CaprimulgimorphaeTrochiliformesHummingbirds45.4340Calypte annaAnna's hummingbird4bCalAnn1Least Concern1.1474D
Erich Jarvis <ejarvis@rockefeller.edu>
48-bird genome original
91
b31CaprimulgimorphaeApodiformesSwifts45.4105Apus apusCommon swift3Least Concern1.2
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; Giulio Formenti <giulio.formenti@unimi.it> has female blood sample of wild animal
Darwin UK EBP / 48-bird genome original
Chaetura pelagicaChimney Swift
Near Threatened
1.10
92
b32CaprimulgimorphaeApodiformes (Hemiprocnidae)Whiskered treeswift49.384Hemiprocne comataWhiskered treeswift2Least Concern1.20
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
93
b33CaprimulgimorphaeCaprimulgiformesNightjars64.1193Caprimulgus europaeusEurasian nightjar3Least Concern1.2
Richard Durbin <rd@sanger.ac.uk>/Mike Stratton; Giulio Formenti <giulio.formenti@unimi.it> has female blood sample from wild animal
Darwin UK EBP / 48-bird genome original
Antrostomus carolinensis
Chuck-will's-widowLeast Concern1.30
94
b34CaprimulgimorphaeCaprimulgiformes (Aegothelidae)Owlet nightjars56.6210Aegotheles insignisBarred owlet-nightjar2Least Concern1.30
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
95
b35CaprimulgimorphaeCaprimulgiformes (Podargidae)Frogmouths59.9616Podargus strigoidesTawny frogmouth2Least Concern1.20
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
96
b36CaprimulgimorphaeCaprimulgiformes (Steatornithidae)Oilbird54.721Steatornis caripensisOilbird2Least Concern1.20
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
97
b37CaprimulgimorphaeCaprimulgiformes (Nyctibiidae)Potoos54.727Nyctibius grandisGreat potoo2Least Concern1.20
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
98
b38OtidimorphaeOtidiformesBustards62.9226Chlamydotis macqueeniiMacQueen's bustard3Vulnerable1.40
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
99
b39OtidimorphaeMusophagiformesTuracos62.9223
Tauraco erythrolophus
Red-crested turaco4Least Concern1.17
Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
100
b40OtidimorphaeCuculiformesCuckoos66.27147Cuculus canorusCommon cuckoo3Least Concern1.40
Jochen Wolf <j.wolf@biologie.uni-muenchen.de>; Tom Gilbert <tgilbert@snm.ku.dk>, Erich Jarvis
48-bird genome original
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