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General information
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This spreadsheet outlines the biogeochemical and chemical ocean diagnostics for CMIP6, as authored by Orr et al. (2016, GMD; https://doi.org/10.5194/gmd-2016-XX). All diagnostics in the GMD manuscript have been entered into this spreadsheet.
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Specific Comments
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1/ The format for this spreadsheet follows that for the CMIP5 spreadsheet from 15 August 2013.
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2/ Recommendations for the gridding of diagnostics (native ocean or spherical lat/lon or both) are detailed in the Griffies et al. (2016, GMD; https://doi.org/10.5194/gmd-2016-77) document.
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3/ As for CMIP5, unless otherwise specified, the ocean diagnostics represent a mean over only the liquid sea water portion of each grid cell (i.e., it is interpreted as "where ocean over ocean"), and the CMIP6 missing_value should be reported where the liquid sea fraction is 0.
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4/ Priorities noted in the tables have been set by scientists who have participated in model intercomparison activities and have used these variables research. Rationalization of the diagnostics are provided in the OMDP report. Please make every effort to save as many of the diagnostics as possible in order to enhance the value of the ocean portion of CMIP6.
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Version information
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160525 - Changed the following: 'Sea Water' -> 'Seawater', 'sea water' -> 'seawater', 'Silicate' -> 'silicon' (most inorganic silicon is not silicate in seawater), 'Phosphate' -> 'phosphorous' (most inorganic phosphorus is not phosphate in seawater) - Orr
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160525 - Changed long name for: 'po4' -> 'Total Dissolved Inorganic Phosphorus Concentration - Orr
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160525 - Changed long name for: 'si' -> 'Total Dissolved Inorganic Silicon Concentration' - Orr
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160525 - Added variables: 'phnat', 'phabio', 'co3nat', 'co3abio', 'dpco2nat', 'dpco2abio', 'spco2nat', 'spco2abio' - Orr
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160525 - Changed priority to 1 for: 'fgco2', 'fgco2nat',' fgco2abio', 'fg14co2abio' - Orr
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160525 - Fixed explanation of 'co3satcalc' and 'co2satarag' in Oyr to be consistent with Omon - Orr
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160525 - Other small tweaks to improve consistency between Oyr and Omon - Orr
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160610 - Added request for 3D tracers: 'dissi13c' (C-13), 'fg13co2' (C-13 air-sea flux) for Oyr and Omon - Orr
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160610 - Added request for 2D air-sea CO2 flux variables: 'fgco2', 'fgco2nat', ' fgco2abio', 'fg14co2abio' - Orr
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160613 - Renamed 'day' sheet to 'Oday' - Durack
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160613 - Removed redundant references to OMDP and CMOR tables - Durack
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160613 - Format tweaks and sheet cleanup (remove hidden cells) - Durack
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160614 - Updated header row to maintain consistency with physics diagnostics spreadsheet - Durack
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160615 - Imported into google sheets for collaboration - Durack
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160815 - Corrected all instances of *Seawater or seawater* to *sea water* and all name entries to *sea_water* - Durack
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161221 - Corrected new surface entries (rows 7:58) so that "CMOR variable name" (column Y) references "output variable name" (column F) - Durack (Omon, Y7:Y58)
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161221 - Corrected variable dms -> dmso to remove abiguity with the atmospheric "dms" variable - Durack (Omon, F106)
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161221 - Corrected variable expcfe -> expfe - Durack (Oyr, F70)
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170110 - Updated cell_methods following suggestion by Martin Juckes "time: mean area: mean where sea depth: sum where sea" - Durack (Omon Q132:Q144, Q152:154, Q173)
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170110 - Updated cell_methods following suggestion by Martin Juckes "time: mean area: mean where sea depth: sum where sea (top 100m only)" - Durack (Omon Q182:193)
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170110 - Updated CMOR dimensions following suggestion by Martin Juckes "longitude latitude time depth0m" - Durack (Omon X155:X169, X171, X174, X176)
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170303 - Comment 3 above has been amended so that "missing_value" rather than "0.0" is reported in cells where the liquid sea fraction is 0
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170304 - Correct invalid long_name from "Dimethyl Sulphide" to "Carbonate Ion in Equilibrium with Pure Calcite" - Durack (Omon, B57) https://github.com/cmip6dr/CMIP6_DataRequest_VariableDefinitions/issues/114
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170304 - Correct invalid long_name from "Dimethyl Sulphide" to "Carbonate Ion in Equilibrium with Pure Aragonite" - Durack (Omon, B58) https://github.com/cmip6dr/CMIP6_DataRequest_VariableDefinitions/issues/114
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170304 - Correct CF standard_name for missing "_" - "surface_mole_concentration_of_carbonate_ion_for_sea_water_in equilibrium_with_pure_calcite" - Durack (Omon, G57)
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170304 - Correct CF standard_name for missing "_" - "surface_mole_concentration_of_carbonate_ion_for_sea_water_in equilibrium_with_pure_aragonite" - Durack (Omon, G58)
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170308 - Correct "CMOR dimensions" for chlos (Oday, W4) and phycos (Oday, W5) from "longitude latitude olevel time" -> "longitude latitude time" - Durack (Thanks to Karl Taylor)
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170509 - Following CF List updates, corrected standard_names (Oday, G4, G5) - Durack
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170509 - Following CF List updates, corrected standard_names (Omon, G7-26, 28, 30-38, 45-58, 61-64, 68, 81, 83-84, 86, 89, 91, 108-111, 113, 116-130, 139, 154, 156-157, 159-160, 162) - Durack
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170509 - Following CF List updates, corrected standard_names (Oyr, G6-9, 13, 27, 29-30, 32, 35, 37, 55-58, 75, 96, 100-104) - Durack
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170509 - Omon column "O" set to duplicate unit entries in column "C" - Durack
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170517 - Corrected standard name and units of "fgco2" following guidance from Alison Pamment (Omon, C&G162; Oyr, C&G100) - Durack http://mailman.cgd.ucar.edu/pipermail/cf-metadata/2017/059482.html
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171228 - updated standard name of dissi14cabioos (Omon) to include _abiotic_analogue: mole_concentration_of_dissolved_inorganic_carbon14_abiotic_analogue_in_sea_water
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170517 - Revised priority (1 -> 2) for "po4" and "si" (Omon, A89, A91) - Durack/Dunne https://github.com/cmip6dr/CMIP6_DataRequest_VariableDefinitions/issues/150
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170517 - Revised priority (2 -> 1) for "phos" and "ph" (Omon, A29, A82) - Durack/Dunne https://github.com/cmip6dr/CMIP6_DataRequest_VariableDefinitions/issues/150
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170608 - Deleted redundant informational cells (Omon, A6-AB6) - Durack/Dunne/Juckes https://github.com/cmip6dr/CMIP6_DataRequest_VariableDefinitions/issues/150#issuecomment-307097342
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170802 - Revised priority (1 -> 2) for talknat, o2, o2sat, no3, dfe, chl (Omon, A80, A84-86, A89, A91); (2 -> 1) for po4 (Omon, A88) - Durack/Orr/Juckes https://github.com/cmip6dr/CMIP6_DataRequest_VariableDefinitions/issues/150#issuecomment-317186594
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171228 - Sea Water is capitalized in long_names of some variables, but is lowercase in long_names of other variables. Should case be consistent for all variables?
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171228 - Corrected long_name of epc100 (Omon) : Downward Flux of Particulate Organic Carbon
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171228 - pdi and ppdiat (Oyr) appear to be the same variable. Need clarification as to how these are different.
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171228 - dpocdtdiaz and ppdiaz (Oyr) appear to be the same variable. Need clarification as to how these are different.
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171228 - dpocdtcalc and ppcalc (Oyr) appear to be the same variable. Need clarification as to how these are different.
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171228 - dpocdtpico and pppico (Oyr) appear to be the same variable. Need clarification as to how these are different.
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171228 - dpocdtmisc (Oyr) variable appears to be missing (if different from ppmisc)
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171228 - updated standard name of dissi14cabio (Oyr) to include _abiotic_analogue: mole_concentration_of_dissolved_inorganic_carbon14_abiotic_analogue_in_sea_water
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171228 - updated standard name of dissi14cabio (Omon) to include _abiotic_analogue: mole_concentration_of_dissolved_inorganic_carbon14_abiotic_analogue_in_sea_water
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171228 - updated standard name of dissi14cabioos (Omon) to include _abiotic_analogue: mole_concentration_of_dissolved_inorganic_carbon14_abiotic_analogue_in_sea_water
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171228 - updated standard name of bsi (Omon, Oyr) to include _organic: mole_concentration_of_particulate_organic_matter_expressed_as_silicon_in_sea_water
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171228 - phycos and chlos (Oday) - should the word "Sea" be removed from long_names to be consistent with Omon long_names?
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171228 - convention/consistency for PO4 which is called phosphorus or phospate. Need clarification.
phosphorus appears to be used consistently in CF standard name.
long_name uses either phosphorus (popos, phypos, intpbp, epp100, po4, pop, phyp, expp, bddtdip) or phosphate (fddtdip, fbddtdip).
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171228 - convention/consistency of SiO4 which is called, silica, silicate or silicon. Clarification needed.
silicon appears to be used consistently in CF standard name.
long_name uses silicon (sios, bsios, physios, si, bddtdisi)
silicate (fddtdisi, fbddtdisi)
silica (intpbsi, epsi100, bsi, physi, pbsi, expsi)
(bsios/physios, the surface equivalents of bsi/physi use silicon in long name)
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171228 - long_name updated for limndiat, limndiaz, limncalc, limnpico (Omon) to use uppercase "L' for 'Limitation"
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171228 - long_name updated for limirrdiat, limirrdiaz, limirrcalc, limirrpico (Omon) to use uppercase "L' for 'Limitation"
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171228 - long_name updated for limfediat, limfediaz, limifecalc, limfepico (Omon) to use uppercase "L' for 'Limitation"
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171228 - propose updating long_name for co3os, co3natos, co3abioos (Omon) to capitalize ‘I’ in ‘Ion’
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171228 - propose updating long_name for co3, co3nat, co3abio, co3satcalc, co3satarag (Omon and Oyr) to capitalize ‘I’ in ‘Ion’
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171228 - Corrected long_name of co3satcalc (Omon) to be consistent with Oyr: Carbonate ion Concentration for sea water in equilibrium with pure Calcite
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171228 - Corrected long_name of co3satarag (Omon) to be consistent with Oyr: Carbonate ion Concentration for sea water in equilibrium with pure Aragonite
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171228 - phydiaz (Omon and Oyr) long_name updated to change case of letter E in "Expressed' to lowercase (for consistency with e.g. phydiat)
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171228 - bddtdisi (Oyr) long_name updated to change case of the letter s in silicon to uppercase (for consistency with e.g. bddtdife)
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171228 - Sea Water is capitalized in long_names of some variables, but is lowercase in long_names of other variables. Should case be consistent for all variables?
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180112 - Resolving items in rows 49-53 per JPD email. Using strikethrough on rows containing pdi, dpocdtdiaz, dpocdtcalc, dpocdtpico to indicate removal of redundant variables.
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180112 - resolving row 58. Updated chlos long_name in Oday to match that in Omon. Surface Mass Concentration of Total Phytoplankton expressed as Chlorophyll in sea water
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180112 - resolving row 58. Updated phycos long_name in Oday to match that in Omon. Surface Phytoplankton Carbon Concentration
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180112 - capitalized Phosphorus in long_name of bddtdip (Oyr)
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180112 - changed long_name of fddtdip (Omon) to use Phosphorus. Resolves item in Row 59.
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180112 - fbddtdip already uses Phosphorus in long_name in this version of data request. Resolves item in row 59
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180112 - bsi, physi (Omon, Oyr) and fddtdisi, fbddtdisi (Omon) already use Silicon in long_names in this version of data request. Resolves item in row 60.
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180112 - changed long_name to Silicon for intpbsi (Omon), epsi100 (Omon), pbsi (Oyr), expsi (Oyr). Resolves item in row 60.
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180112 - capitalized Silicon in long_name of bsi (Oyr)
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180112 - capitalized Ion in long_names of co3os, co3natos, co3abioos (Omon), co3, co3nat, co3abio, co3satcalc, co3satarag (Omon and Oyr). Resolves item in rows 64, 65.
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180112 - changed sea water to lowercase in standard names (Omon - rows 18 to 24, 71-77). Resolves item in row 47 (and duplicate item in row 70)
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180117 - removed 'surface_' from po4os CF standard name (Omon) to be consistent with other surface variables (JGJ)
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180117 - added '_expressed_as_carbon' to CF standard names for calc and arag (Omon, Oyr) (JGJ)
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180117 - incorrect long_name for phyfeos (Omon). Updated long_name to Surface Mole Concentration of Total Phytoplankton expressed as Iron in sea water (JGJ)
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180117 - incorrect long_name for phyfe (Omon). Updated long_name to Mole Concentration of Total Phytoplankton expressed as Iron in sea water (JGJ)
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180117 - updated CF standard name for co3 (Omon, Oyr) to be consistent with latest CF standard names and equivalent surface variables (JGJ)
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180117 - updated long_names of co3satcalc and co3satarag (Omon, Oyr) to match equivalent surface variables (JGJ)
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180117- updated long_name of dfe (Oyr) to be consistent with dfe (Omon) and equivalent surface variable (JGJ)
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180117 - updated long_name of chl (Oyr) to be consistent with chl (Omon) and equivalent surface vaiable (JGJ)
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180117 - updated long_name of chldiat (Oyr) - added 's' to Diatom to be consistent with Omon (JGJ)
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180117 - updated long_name of phyn (Omon) to be consistent with that in Oyr (JGJ)
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TODO: Clarify standard_names and units for surface flux terms - Omon (rows 162-168) - http://mailman.cgd.ucar.edu/pipermail/cf-metadata/2017/059483.html
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TODO: Check updates in https://github.com/cmip6dr/CMIP6_DataRequest_VariableDefinitions/issues/119
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TODO: Purge "working" columns in Oday sheet, H, I, J, K, L, O, and X
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TODO: Purge "working" columns in Omon sheet, H, I, J, K, L, M, N, and P
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TODO: Purge "working" columns in Oyr sheet, H, I, J, and M and "EditsRequired" sub-sheet
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TODO: All *os variables need to include "depthOm" in their dimensions
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