Planning_spike_sorting_Rat_OS_Ephys.xlsx

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R	T	U	V	W	X	Y	Z	AA	AB	AC	AD	AE	AF	AG	AH	AI	AJ	AK	AL	AM	AN	AO	AP	AQ
1						Training														Test
2	Rat No.	treatment	study_day	condition	hardrive_analysis	comments	signal_check_and_excel	concatenation	tetrode_split	check_t1-pt1_concensus and JSON	spike_sorting	manual_curation	Computer used	waveform_extraction	cell_type	firing_rate	cell assembly	ripple timestamps	hard drive	concatenation	tetrode_split	check_t1-pt1_concensus and JSON	spike_sorting	manual_curation	concatenation	tetrode_split	check_t1-pt1_concensus and JSON	spike_sorting	qulity_metrics	manual_curation	comments_manual_curation	n_terodes	n_units	n_mua	n_noise	Person_curating	Computer used	Person assigned	raw_data_location	merged_data_location	curated_data_location	final_location
3	1	0	1	con	Homer (Irene's computer)		8/12/2020	9/12/2020	15/12/2020	19/12/2020	28/12/2020	28/12/2020					26/07/2021		Seagate1	19/04/2021
4	1	0	2	od	Homer (Irene's computer)	low consensus	10/12/2020	9/12/2020	15/12/2020	19/12/2020	30/12/2020	31/12/2020					26/07/2021		Seagate1	19/04/2021
5	1	0	3	or	Homer (Irene's computer)	low consensus	10/12/2020	9/12/2020	15/12/2020	21/12/2020	01/01/2021	06/01/2021					26/07/2021		Seagate1	19/04/2021
6	1	0	4	hc	Adrian's computer Data	low consensus. pt5 split in pt5.1 and pt5.2	10/12/2020	10/12/2020	15/12/2020	21/12/2020	05/09/2021	pending				PT5 is plit in two files, in the first one the allevent and message files 0bytes
7	1	0	5	con	Adrian's computer Data	low consensus	13/12/2020	16/04/2021	01-05-2021	pending	pending								Seagate1	19/04/2021
8	1	0	6	od	Homer (Irene's computer)		13/12/2020	17/04/2021	01-05-2021	17/05/2021	21/05/2021	03/06/2021					07/09/2021		Seagate1	19/04/2021
9	1	0	7	or	Homer (Irene's computer)		13/12/2020	17/04/2021	01-05-2021	19/05/2021	21/05/2021	03/06/2021					07/09/2021		Seagate1	19/04/2021
10	1	0	8	hc	Homer (Irene's computer)		13/12/2020	11/1/2021	11/1/2021	19/01/2021	22/01/2021	25/01/2021					07/09/2021
11
12	2	0	1	od	Adrian's computer Data		11/12/2020	30/8/2021	30/8/21	pending						PT5			Seagate1	19/04/2021
13	2	0	2	or	Homer (Irene's computer)		11/12/2020	14/12/2020	16/12/20	02/01/2021	05/01/2021	06/01/2021					07/09/2021		Seagate1	19/04/2021
14	2	0	3	con	Homer (Irene's computer)	low consensus	11/12/2020	14/12/2020	16/12/20	05/01/2021	07/01/2021	25/01/2021					07/09/2021		Seagate1	19/04/2021
15	2	0	4	hc	Homer (Irene's computer)	no consensus	11/12/2020	13/12/2020	16/12/20	07/01/2021	09/01/2021	25/01/2021					07/09/2021
16	2	0	5	or	Homer (Irene's computer)	low consensus	11/12/2020	12/1/2021	12/1/2021	19/01/2021	23/01/2021	25/01/2021					generate done		Seagate1	19/04/2021
17	2	0	6	con	Homer (Irene's computer)		11/12/2020	17/04/2021	01-05-2021	19/05/2021	24/05/2021	03/06/2021					generate done		Seagate1	19/04/2021
18	2	0	7	od	Homer (Irene's computer)		11/12/2020	18/04/2021	01-05-2021	25/05/2021	26/05/2021	03/06/2021	Adrian's computer DATA						Seagate1	19/04/2021
19	2	0	8	hc	2q		11/12/2020	19/04/2021	01-05-2021	27/05/2021	29/05/2021	03/06/2021	Adrian's computer DATA				generate done	3 presleep files and the 3rd presleep file has no states vector
20	2	0	9	or	Homer (Irene's computer)		11/12/2020	18/04/2021	01-05-2021	29/05/2021	30/05/2021	04/06/2021	Adrian's computer DATA				generate done		Seagate1	19/04/2021
21	2	0	10	cOD3min			11/12/2020
22
23	3	1	1	od	spike(Irene's computer)			19/03/2021	19/03/2021	22/3/2021	03/04/2021	april2021	Malaga				03/06/2021	Post Trial 3 data missing	Seagate1	22/04/2021
24	3	1	3	or	spike (Irene's computer)		9/12/2020	10/12/2020	15/12/2020	15/12/2020	17/12/2020	18/12/2020					24/05/2021		Seagate1	22/04/2021
25	3	1	5	con	spike (Irene's computer)		9/12/2020	11/12/2020	15/12/2020	17/12/2020	corrupt files error	error even after truncating				Pre-sleep
26	3	1	6	or	spike (Irene's computer)		9/12/2020	11/12/2020	15/12/2020	18/12/2020	22/12/2020	28/12/2020					generate done		Seagate1	22/04/2021	note: on the 01-05-2021 merging of PT5with Test to test agreement between training and test in bursty
27	3	1	8	con	spike	files were not in spike sorting folder, but another folder.	9/12/2020	13/12/2021	23/01/2021	24/01/2021	31/01/2021	done probably somewhere in januaryu 2021					03/06/2021		Seagate1	22/04/2021
28	3	1	9	6hsleep			9/12/2020
29	3	1	10	od	spike	high consensus	9/12/2020	15/01/2021	15/01/2021	02/02/2021	07/02/2021	marzo 2021					generate done		Seagate1	22/04/2021
30	3	1	11	cOD48h			9/12/2020
31	3	1	12	cOD3min			9/12/2020
32	3	1	13	con	bursty	spike full	9/12/2020	19/04/2021	01/05/2021	20/05/2021	29/05/2021	pending							Seagate1	in progress
33	3	1	14	hc	spike (irene's computer)	cell assembly candidate	9/12/2020	12/12/2020	15/12/2020	22/12/2020	26/12/2020	28/12/2020					Modified at 03/06/2021
34	3	1	15	hc	spike(irene's computer)	missing activation matrices	9/12/2020	around first week dec2020	around first week dec2020	around first week dec2020	around first week dec2020	around first week dec2020
35	3	1	16	or	spike(irene's computer)		9/12/2020	5/12/2020	5/12/2020	6/12/2020	13/12/2020	14/12/2020
36
37	4	1	3	con	bursty (irene's computer)		9/12/2020	15/12/2020	16/12/2020	23/12/2020	12/01/2020	25/01/2021					07/09/2021
38	4	1	4	hc	bursty (irene's computer)		9/12/2020	15/12/2020	16/12/2020	24/12/2020	14/01/2020	19/03/2021					07/09/2021
39	4	1	5	od	bursty (irene's computer)	low consensus in HPC	9/12/2020	15/12/2020	16/12/2020	24/12/2020	16/01/2020	20/03/2021					07/09/2021
40	4	1	6	or	bursty (irene's computer)		9/12/2020	16/12/2020	16/12/2020	25/12/2020	19/01/2020	20/03/2021					07/09/2021
41	4	1	7	cOD3min			10/12/2020											States vectors are missing
42	4	1	8	cOD48h			10/12/2020											States vectors are missing
43	4	1	9	hc	seagate1 (move to bursty. Problem with some names too long)	Pt4 split in pt4.1,pt4.2 y pt4.3	10/12/2020	20/04/2021	01-05-2021	30-05-2021	11-06-2021	07-07-2021
44	4	1	10	con	Bursty		10/12/2020	20/04/2021	01-05-2021	03-06-2021	13-06-2021	06-07-2021
45	4	1	11	6hsleep			10/12/2020
46	4	1	12	or	Bursty		10/12/2020	21/04/2021	01-05-2021	05-06-2021	06-06-2021	06-07-2021
47
48	6	0	1	hc	Adrián's computer			21-07-2021	21-07-2021	pending		error even after truncating				PT5
49	6	0	2	or	Adrián's computer	PT5 split in pt5 and pt5_1		21-07-2021	21-07-2021	pending		error even after truncating				Pre-sleep and PT5
50	6	0	3	con	Adrián's computer			22-07-2021	22-07-2021	pending		error even after truncating				PT5		Pre-sleep data is missing
51	6	0	4	od	Theta	PT5 split in pt5 and pt5_1	02/02/2020	21/12/2020	21/12/2020	09/03/2021	12/03/2021	26/03/2021					07/09/2021	Post trial 5 data split. Chunk 2 needs sleep scoring
52	6	0	5	cOD48h
53	6	0	6	cOD3min
54	6	0	7	hc	Theta	Trial2 split in trial2 and trial2_2. the first one only half minute	01/02/2021	14/01/2021	14/01/2021	12/03/2021	16/03/2021	27/03/2021					07/09/2021
55	6	0	8	or	Theta		01/02/2021	14/01/2021	14/01/2021	16/03/2021	19/03/2021	28/03/2021					07/09/2021
56	6	0	9	con	Theta	Pt5 split in pt5 and pt5_2	01/02/2021	15/01/2021	15/01/2021	19/03/2021	21/03/2021	27/03/2021					07/09/2021
57	6	0	10	hccod
58	6	0	11	or_n				01/08/2023	25/07/2023	25/07/2023	02/08/2023	31/08/2023	Tarkus																03/08/2023	31/08/2023		9	3	0	43	Florian	Tarkus
59	6	0	12	6hsleep
60
61	7	1	1	hc	in data (irene's computer). remember to copy to FANO when manual curation is done		15/12/2020	16/12/2020	16/12/2020	08/03/2021	11/03/2021	20/03/2021	Malaga				07/09/2021
62	7	1	2	or	in data (irene's computer). remember to copy to FANO when manual curation is done	PT5 split in pt5 and pt5_2	15/12/2020	23/7/2021	24/7/2021	pending		error even after truncating	Malaga			PT5. Recording split and first one is corrupted. It can be opened in the scorer, but the raw signal cannot be observed. So only the last 2633s were recorded		Post Trial 5 States vector is abnormally short
63	7	1	3	con		All tetrodes from one headstage gone during rearing during the whole sd. The Y-piece was broken. Consider replace this sd by SD11_CON	15/12/2020
64	7	1	4	hc		All tetrodes from one headstage gone during rearing during the whole sd. The Y-piece was broken. Consider replace this sd by SD9_HC	15/12/2020
65	7	1	5	od	in data (irene's computer). remember to copy to FANO when manual curation is done		15/12/2020	18/12/2020	18/12/2020	12/03/2021	15/03/2021	20/03/2021	Malaga				07/09/2021
66	7	1	6	cOD48h			15/12/2020
67	7	1	7	hccod			15/12/2020
68	7	1	8	cod3min			15/12/2020
69	7	1	9	hc	in data (irene's computer). remember to copy to FANO when manual curation is done		15/12/2020	21/12/2020	21/12/2020	16/03/2021	20/03/2021	30/03/2021	Malaga
70	7	1	10	or	FANO		15/12/2020	03/06/2021	06/06/2021	06/06/2021	07/06/2021	06-07-2021
71	7	1	11	con	in data (irene's computer). remember to copy to FANO when manual curation is done		15/12/2020	20/12/2020	20/12/2020	22/03/2021	26/03/2021	01/04/2021	Malaga				07/09/2021
72	7	1	12	hccod			16/12/2020
73	7	1	13	or_n			16/12/2020
74	7	1	14	6hsleep			16/12/2020
75
76	8	1	1	hc	Data (Adrián's computer)	PT3 split in PT3_1 and PT3_2 and 3 min between them	18/12/2020	10/09/2021	13/09/2021	pending						Pre-sleep and PT3
77	8	1	2	con	bursty		18/12/2020	18/12/2020	18/12/2020	03/03/2021	06/03/2021	20/03/2021	Malaga				07/09/2021
78	8	1	3	or	bursty	PT5 aprox 24 min shorter. And PT5 split in pt5 and pt5_2, probably that is why we got many detections that were noise	21/12/2020 (Y-piece artefacts in some channels)	09-07-2021	09-07-2021			23-07-2021				PT5
79	8	1	4	hccod			21/12/2020
80	8	1	5	cOD48h			21/12/2020
81	8	1	6	od	bursty		21/12/2020	20/12/2020	20/12/2020	06/03/2021		23-07-2021				I noticed that the all channel events file was empty. The trial 1 and PT1 was fine, so no sure. Re check	07/09/2021
82	8	1	7	cOD3min			21/12/2020
83	8	1	8	or_n			21/12/2020
84	8	1	9	6hsleep			21/12/2020
85	8	1	10	hc	bursty		21/12/2020	17/7/2021	17/7/2021			23-07-2021	Malaga			I do not have any notes. So maybe it is just the merging, will try to repeat it. Or maybe try to repeat the spike sorting	07/09/2021
86
87	9	0	1	hc	Rat9_temporary (Irene's computer)		17/12/2020	21/12/2020	21/12/2020	08/02/2021	26-03-2021	22-03-2021					07/09/2021
88	9	0	2	con	Rat9_temporary (Irene's computer)		17/12/2020	21/12/2020	21/12/2020	17/02/2021	20/02/2021	23-03-2021					07/09/2021
89	9	0	3	or	Rat9_temporary (Irene's computer)		17/12/2020	21/12/2020	21/12/2020	21/02/2021	03/03/2021	24-03-2021					07/09/2021
90	9	0	4	hccod			17/12/2020												data irene's computer	30-04-2021	pT5+Test to proof agreement between training and test, but corrupted
91	9	0	5	cOD48h			17/12/2020
92	9	0	6	od	Rat9_temporary(irene's computer)		17/12/2020	22/12/2020	22/12/2020	03/03/2021	06/03/2021	26-03-2021					07/09/2021
93	9	0	7	cOD3min			17/12/2020
94	9	0	8	6hsleep			17/12/2020
95	9	0	9	or_n			17/12/2020	26/07/2023	26/07/2023	26/07/2023	29/07/2023	31/08/2023	Tarkus																03/08/2023	31/08/2023		9	9	0	530	Florian	Tarkus
96
97
98
99
100