PASS1B flagged samples

	A	B	C	D	E	F	G	H	I
1	viallabel	dataset	reason	sex	pid	group	assay	flagged_by

2	90223013107	t31-plasma,metab-t-oxylipneg,emory	PC2	male	10025707	8w,training	metab-t-oxylipneg	BIC_QC_report
3	90426013107	t31-plasma,metab-t-oxylipneg,emory	PC1	male	10503110	1w,training	metab-t-oxylipneg	BIC_QC_report
4	90450013107	t31-plasma,metab-t-oxylipneg,emory	PC2	male	10672656	2w,training	metab-t-oxylipneg	BIC_QC_report
5	90571013107	t31-plasma,metab-t-oxylipneg,emory	PC2	female	10953744	1w,training	metab-t-oxylipneg	BIC_QC_report
6	90265015208	t52-hippocampus,metab-t-oxylipneg,emory	PC1	female	10046119	8w,control	metab-t-oxylipneg	BIC_QC_report
7	90560015208	t52-hippocampus,metab-t-oxylipneg,emory	PC2	female	10700102	1w,training	metab-t-oxylipneg	BIC_QC_report
8	90283015511	t55-gastrocnemius,metab-t-oxylipneg,emory	PC1	male	10139044	4w,training	metab-t-oxylipneg	BIC_QC_report
9	90441015511	t55-gastrocnemius,metab-t-oxylipneg,emory	PC1	male	10502300	2w,training	metab-t-oxylipneg	BIC_QC_report
10	90571015809	t58-heart,metab-t-oxylipneg,emory	PC3	female	10953744	1w,training	metab-t-oxylipneg	BIC_QC_report
11	90266016908	t69-brown-adipose,metab-t-oxylipneg,emory	PC3	female	10046380	8w,control	metab-t-oxylipneg	BIC_QC_report
12	90232017010	t70-white-adipose,metab-t-oxylipneg,emory	PC1	male	10026789	8w,control	metab-t-oxylipneg	BIC_QC_report
13	90222013104	t31-plasma,metab-u-hilicpos,broad	PC3	male	10025626	8w,training	metab-u-hilicpos	BIC_QC_report
14	90412015205	t52-hippocampus,metab-u-hilicpos,broad	PC2	female	10337199	4w,training	metab-u-hilicpos	BIC_QC_report
15	90225015303	t53-cortex,metab-u-hilicpos,broad	PC3	male	10025979	8w,training	metab-u-hilicpos	BIC_QC_report
16	90237015303	t53-cortex,metab-u-hilicpos,broad	PC3	male	10027327	8w,control	metab-u-hilicpos	BIC_QC_report
17	90245015303	t53-cortex,metab-u-hilicpos,broad	PC3	female	10043527	8w,control	metab-u-hilicpos	BIC_QC_report
18	90564015303	t53-cortex,metab-u-hilicpos,broad	PC3	female	10833331	1w,training	metab-u-hilicpos	BIC_QC_report
19	90578016103	t61-colon,metab-u-hilicpos,broad	PC1	female	10734945	2w,training	metab-u-hilicpos	BIC_QC_report
20	90223013105	t31-plasma,metab-u-ionpneg,michigan	PC3	male	10025707	8w,training	metab-u-ionpneg	BIC_QC_report
21	90564013105	t31-plasma,metab-u-ionpneg,michigan	PC3	female	10833331	1w,training	metab-u-ionpneg	BIC_QC_report
22	90265015206	t52-hippocampus,metab-u-ionpneg,michigan	PC2	female	10046119	8w,control	metab-u-ionpneg	BIC_QC_report
23	90412015206	t52-hippocampus,metab-u-ionpneg,michigan	PC2	female	10337199	4w,training	metab-u-ionpneg	BIC_QC_report
24	90426015206	t52-hippocampus,metab-u-ionpneg,michigan	PC2	male	10503110	1w,training	metab-u-ionpneg	BIC_QC_report
25	90449015206	t52-hippocampus,metab-u-ionpneg,michigan	PC2	male	10641858	2w,training	metab-u-ionpneg	BIC_QC_report
26	90412015510	t55-gastrocnemius,metab-u-lrpneg,georgia	PC2	female	10337199	4w,training	metab-u-lrpneg	BIC_QC_report
27	90576015510	t55-gastrocnemius,metab-u-lrpneg,georgia	PC1	female	10729518	2w,training	metab-u-lrpneg	BIC_QC_report
28	90266015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	female	10046380	8w,control	metab-u-lrppos	BIC_QC_report
29	90267015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	female	10046461	8w,training	metab-u-lrppos	BIC_QC_report
30	90280015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	male	10095241	4w,training	metab-u-lrppos	BIC_QC_report
31	90281015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	male	10106383	4w,training	metab-u-lrppos	BIC_QC_report
32	90283015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	male	10139044	4w,training	metab-u-lrppos	BIC_QC_report
33	90289015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	male	10185585	4w,training	metab-u-lrppos	BIC_QC_report
34	90292015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	male	10220917	4w,training	metab-u-lrppos	BIC_QC_report
35	90406015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	female	10306471	4w,training	metab-u-lrppos	BIC_QC_report
36	90410015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	female	10335064	4w,training	metab-u-lrppos	BIC_QC_report
37	90412015510	t55-gastrocnemius,metab-u-lrppos,georgia	PC1	female	10337199	4w,training	metab-u-lrppos	BIC_QC_report
62	90266016002	adrenal powder,stanford	PC1	female	10046380	8w,control	transcript-rna-seq	BIC_QC_report
63	90422016002	adrenal powder,stanford	PC1	male	10422463	1w,training	transcript-rna-seq	BIC_QC_report
64	90426016002	adrenal powder,stanford	PC1	male	10503110	1w,training	transcript-rna-seq	BIC_QC_report
65	90571016002	adrenal powder,stanford	PC1	female	10953744	1w,training	transcript-rna-seq	BIC_QC_report
66	90406016502	aorta powder,stanford	PC3	female	10306471	4w,training	transcript-rna-seq	BIC_QC_report
67	90266016902	brown adipose powder,mssm	PC1	female	10046380	8w,control	transcript-rna-seq	BIC_QC_report
68	90229016102	colon powder,stanford	PC3	male	10026355	8w,control	transcript-rna-seq	BIC_QC_report
69	90441016102	colon powder,stanford	RIN<6	male	10502300	2w,training	transcript-rna-seq	BIC_QC_report
70	90406015202	hippocampus powder,mssm	PC1	female	10306471	4w,training	transcript-rna-seq	BIC_QC_report
71	90252015402	hypothalmus powder,mssm	PC3	female	10044337	8w,control	transcript-rna-seq	BIC_QC_report
72	90406015402	hypothalmus powder,mssm	PC1	female	10306471	4w,training	transcript-rna-seq	BIC_QC_report
73	90444015902	kidney powder,mssm	PC2	male	10587543	2w,training	transcript-rna-seq	BIC_QC_report
74	90218016803	liver powder,mssm	PC2	male	10024735	8w,training	transcript-rna-seq	BIC_QC_report
75	90576016402	ovaries powder,stanford	PC1	female	10729518	2w,training	transcript-rna-seq	BIC_QC_report
76	90581016402	ovaries powder,stanford	PC1	female	10761160	2w,training	transcript-rna-seq	BIC_QC_report
77	90571016402	ovaries powder,stanford	PC1	female	10953744	1w,training	transcript-rna-seq	BIC_QC_report
78	90218013001	paxgene rna,stanford	NumReads<20M	male	10024735	8w,training	transcript-rna-seq	BIC_QC_report
79	90222013002	paxgene rna,stanford	Sex-flagged,PC1	male	10025626	8w,training	transcript-rna-seq	BIC_QC_report
80	90245013002	paxgene rna,stanford	NumReads<20M	female	10043527	8w,control	transcript-rna-seq	BIC_QC_report
81	90251013001	paxgene rna,stanford	Sex-flagged	female	10044256	8w,training	transcript-rna-seq	BIC_QC_report
82	90441016702	small intestine powder,stanford	PC2	male	10502300	2w,training	transcript-rna-seq	BIC_QC_report
83	90217015603	vastus lateralis powder,mssm	PC3	male	10023259	8w,control	transcript-rna-seq	BIC_QC_report
84	90252015603	vastus lateralis powder,mssm	PC1,PC2	female	10044337	8w,control	transcript-rna-seq	BIC_QC_report
85	90585015603	vastus lateralis powder,mssm	PC1	female	10871349	2w,training	transcript-rna-seq	BIC_QC_report
86	90245017005	white adipose powder,mssm	PC2	female	10043527	8w,control	transcript-rna-seq	BIC_QC_report
87	90410017005	white adipose powder,mssm	PC3	female	10335064	4w,training	transcript-rna-seq	BIC_QC_report
88	90423017005	white adipose powder,mssm	PC2,PC3	male	10424911	1w,training	transcript-rna-seq	BIC_QC_report
89	90564017005	white adipose powder,mssm	PC2	female	10833331	1w,training	transcript-rna-seq	BIC_QC_report
90	all	all	poor responder to training (VO2-max)	female	10044256	8w,training	all	Sue Bodine
91	all	all	poor responder to training (VO2-max)	male	10026193	8w,training	all	Sue Bodine	this PID isn't included in the phenotypic data
92	90406015204	hippocampus,stanford	PC1,PC2	female	10306471	4w,training	epigen-atac-seq	BIC_QC_report
93	90423015204	hippocampus,stanford	PC1,PC2	male	10424911	1w,training	epigen-atac-seq	BIC_QC_report
94	90239015504	gastrocnemius,mssm	PC1	male	10027599	8w,control	epigen-atac-seq	BIC_QC_report
95	90252015504	gastrocnemius,mssm	PC1	female	10044337	8w,control	epigen-atac-seq	BIC_QC_report
96	90265015504	gastrocnemius,mssm	PC1	female	10046119	8w,control	epigen-atac-seq	BIC_QC_report
97	90283015504	gastrocnemius,mssm	PC1	male	10139044	4w,training	epigen-atac-seq	BIC_QC_report
98	90420015504	gastrocnemius,mssm	PC1	female	10411690	4w,training	epigen-atac-seq	BIC_QC_report
99	90422015504	gastrocnemius,mssm	PC1	male	10422463	1w,training	epigen-atac-seq	BIC_QC_report
100	90576015504	gastrocnemius,mssm	PC1,PC2	female	10729518	2w,training	epigen-atac-seq	BIC_QC_report
101	90578015504	gastrocnemius,mssm	PC1	female	10734945	2w,training	epigen-atac-seq	BIC_QC_report
102	90222015505	gastrocnemius,stanford	PC2,PC3	male	10025626	8w,training	epigen-atac-seq	BIC_QC_report
103	90567015505	gastrocnemius,stanford	PC2	female	10901434	1w,training	epigen-atac-seq	BIC_QC_report
104	90585015505	gastrocnemius,stanford	NoMonoDiNucPeaks,PC3	female	10871349	2w,training	epigen-atac-seq	BIC_QC_report
105	90267015802	heart,stanford	NumFiltReads<20M,PC2,PC3	female	10046461	8w,training	epigen-atac-seq	BIC_QC_report
106	90567015802	heart,stanford	NumFiltReads<20M,PC2,PC3	female	10901434	1w,training	epigen-atac-seq	BIC_QC_report
107	90259015904	kidney,stanford	PC3	female	10045309	8w,training	epigen-atac-seq	BIC_QC_report
108	90259016602	lung,stanford	PC2,PC3	female	10045309	8w,training	epigen-atac-seq	BIC_QC_report
109	90439016602	lung,stanford	NoMonoDiNucPeaks,PC2	male	10486003	2w,training	epigen-atac-seq	BIC_QC_report
110	90265016602	lung,stanford	NoMonoDiNucPeaks,PC3	female	10046119	8w,control	epigen-atac-seq	BIC_QC_report
111	90267016805	liver,stanford	NumFiltReads<20M,PC2	female	10046461	8w,training	epigen-atac-seq	BIC_QC_report
112	90567016805	liver,stanford	NumFiltReads<20M,PC2	female	10901434	1w,training	epigen-atac-seq	BIC_QC_report
113	90266016904	brown adipose,stanford	PC2	female	10046380	8w,control	epigen-atac-seq	BIC_QC_report
114	90567017011	white adipose,stanford	NumFiltReads<20M,MacsFrip<0.1,TssEnrich<4,PC3	female	10901434	1w,training	epigen-atac-seq	BIC_QC_report
115	90217017011	white adipose,stanford	NoMonoDiNucPeaks,TssEnrich<4	male	10023259	8w,control	epigen-atac-seq	BIC_QC_report
116	90218017011	white adipose,stanford	NoMonoDiNucPeaks,TssEnrich<4	male	10024735	8w,training	epigen-atac-seq	BIC_QC_report
117	90222017011	white adipose,stanford	NoMonoDiNucPeaks,TssEnrich<4	male	10025626	8w,training	epigen-atac-seq	BIC_QC_report
118	90223017011	white adipose,stanford	NoMonoDiNucPeaks,TssEnrich<4	male	10025707	8w,training	epigen-atac-seq	BIC_QC_report
119	90229015802	heart,stanford	NoMonoDiNucPeaks	male	10026355	8w,control	epigen-atac-seq	BIC_QC_report
120	90229017011	white adipose,stanford	NoMonoDiNucPeaks	male	10026355	8w,control	epigen-atac-seq	BIC_QC_report
121	90232017011	white adipose,stanford	NoMonoDiNucPeaks	male	10026789	8w,control	epigen-atac-seq	BIC_QC_report
122	90237017011	white adipose,stanford	TssEnrich<4	male	10027327	8w,control	epigen-atac-seq	BIC_QC_report
123	90239017011	white adipose,stanford	TssEnrich<4	male	10027599	8w,control	epigen-atac-seq	BIC_QC_report
124	90245016805	liver,stanford	NumFiltReads<20M	female	10043527	8w,control	epigen-atac-seq	BIC_QC_report