Singleton E SNPs
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Haplogroup E Candidate SNPs found in only one person
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Build 37 positionBuild 36 positionAncestral alleleDerived alleleNotesData FileQuality Score
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Sample HG01104 Puerto RicoE1b1b1b1b (M183+)prob. neg for 2 known M183 subgrps
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1628019614789590CGthis mutation found also in NA18549, haplogroup G, L140+HgE_PartII_080511.vcf9.3
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1905855817567952CAHgE_PartII_080511.vcf14.9
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2203336020492748TC HgE_PartII_080511.vcf6.5
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Sample HG01107 Puerto RicoE1b1b1a1b (V13+)prob. neg for 8 known V13 subgrps
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1421088512720885CGHgE_PartII_080511.vcf25.3
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1542579913935193CACa gene found in this locationHgE_PartII_080511.vcf44.8
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1577531314284707AGHgE_PartII_080511.vcf51.3
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Sample HG01112 Medellin ColombiaE1b1b1c1 (M34+)prob. neg for 2 known M34 subgrps
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74274807487480GAHgE_PartII_080511.vcf6.9
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82217318281731GAHgE_PartII_080511.vcf15.3
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90180719078071GA HgE_PartII_080511.vcf5.4
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1400432712514327GAHgE_PartII_080511.vcf15.4
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1403574112545741CTHgE_PartII_080511.vcf49.5
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1719745315706847GCHgE_PartII_080511.vcf9.7
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Sample HG01187 Puerto RicoE1b1a1a (M58+)
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1471368213223703TCHgE_PartIII_081011.vcf41.7
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1643819814947592ATHgE_PartIII_081011.vcf64.7
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1649992315009317TCHgE_PartIII_081011.vcf39.2
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1712393615633330GAHgE_PartIII_081011.vcf44.6
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1813320716642601CGHgE_PartIII_081011.vcf65.2
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2264083421050222AGa gene found at this siteHgE_PartIII_081011.vcf32.6
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2399246822401856GAHgE_PartIII_081011.vcf44.5
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Sample HG01204 Puerto RicoE1b1a1g1 (P277+)neg for U290 & P59 subgrps and probably for 2 others as well
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44273394487339CGHgE_PartV_082111.vcf93.2
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83990348459034CAHgE_PartV_082111.vcf70.0
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985572710465727GTDYS615HgE_PartV_082111.vcf23.0
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1425775512767755TCHgE_PartV_082111.vcf73.4
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1649390215003296CTHgE_PartV_082111.vcf33.4
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1670864715218041CTa gene found at this siteHgE_PartV_082111.vcf15.5
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1720624915715643CTHgE_PartV_082111.vcf39.1
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1757116116080555GCHgE_PartV_082111.vcf7.5
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1789387416403268AGHgE_PartV_082111.vcf68.1
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1826100216770396GTHgE_PartV_082111.vcf9.8
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1910075217610146GAHgE_PartV_082111.vcf40.1
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2156751920026907CTHgE_PartV_082111.vcf28.2
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2208837920547767TAHgE_PartV_082111.vcf53.5
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2301850021427888GAHgE_PartV_082111.vcf15.3
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Sample HG01250 Medellin ColombiaE1b1b1c1 (M34+)prob. neg for 2 known M34 subgrps
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27893832849383ATTTATTHgE_PartII_080511.vcf8.2
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76539597713959GTHgE_PartII_080511.vcf13.7
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83933698453369TCHgE_PartII_080511.vcf9.5
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1362601212086012GAHgE_PartII_080511.vcf41.2
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1434444412854445GAHgE_PartII_080511.vcf64.9
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1449009113000099GCa gene found at this siteHgE_PartII_080511.vcf16.9
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1535092613860320GTHgE_PartII_080511.vcf12.5
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1537413613883530GAa gene found at this siteHgE_PartII_080511.vcf52.9
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1566817714177571CTHgE_PartII_080511.vcf45.8
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1575726214266656ACHgE_PartII_080511.vcf26.6
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1617223714681631GCHgE_PartII_080511.vcf18.7
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1791551116424905TCHgE_PartII_080511.vcf26.6
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1929834417807738CTa gene found at this siteHgE_PartII_080511.vcf25.5
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1939203617901430CTHgE_PartII_080511.vcf13.3
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2132050119779889GTHgE_PartII_080511.vcf15.4
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2216534620624734GTHgE_PartII_080511.vcf45.3
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2289159321300981TCa gene found at this siteHgE_PartII_080511.vcf8.7
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2330209421711482GCGHgE_PartII_080511.vcf10.2
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Sample HG01377 Medellin ColombiaE1b1b1a1d (V65+)
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31519233211923GAHgE_PartI_080211.vcf23.4
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32949403354940CTHgE_PartII_080511.vcf24.7
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36727293732729GCHgE_PartI_080211.vcf79.6
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60305886090588AGHgE_PartI_080211.vcf14.5
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72597727319772GAHgE_PartI_080211.vcf84.1
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78302417890241TCHgE_PartI_080211.vcf47.7
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85342148594214ATHgE_PartI_080211.vcf24.8
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85734368633436GAHgE_PartII_080511.vcf22.1
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994691910556919CTHgE_PartII_080511.vcf15.7
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1354293812002938CGHgE_PartII_080511.vcf15.8
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1366018612120186GAHgE_PartII_080511.vcf10.1
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1401622212526222GAHgE_PartI_080211.vcf13.8
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1491896113428355TCTCCTTCTa gene found at this siteHgE_PartI_080211.vcf69.9
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1769750016206894CTHgE_PartI_080211.vcf40.1
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1854196817051362ATHgE_PartI_080211.vcf59.1
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1864053117149925ATHgE_PartII_080511.vcf83.7
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1873532017244714ATHgE_PartI_080211.vcf50.8
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1912984617639240AGHgE_PartI_080211.vcf34.9
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1943125717940651AGHgE_PartI_080211.vcf54.6
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2108067819540066AGHgE_PartI_080211.vcf12.4
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2267631921085707GCa gene found at this siteHgE_PartII_080511.vcf73.7
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2316191021571298GAHgE_PartI_080211.vcf30.4
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2345008221859470TGHgE_PartII_080511.vcf47.5
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Sample HG01455 Medellin ColombiaE1b1b1c1 (M34+)prob. neg for 2 known M34 subgrps
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