ABCDEFGHIJKLMNOPQRSTUVWXYZ
1
Gene NameSpeciesNCBI IDNCBI linkPadlock Probe NameRecognized Sequence positionRecognized Sequence (red: ligation site)Padlock Probe SequenceDetection Probe Sequence
Fluorophore
2
Sox2mus musculus NM_011443.4https://www.ncbi.nlm.nih.gov/nuccore/NM_011443.4Sox2_m_pr1_A1_SplR2334-2375AATCAGGCTGCCGAGAATCCATGTATATATTTGAACTAATAATTCTCGGCAGCCTGATT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACTGCTATCTTCTTT TATTAGTTCAAATATATACATGGSox2_m_pr1_Cy3CAA AUA TAT ACA UGG ATT CUC GGC AGC[Cy3]
3
Sox2_m_pr2_A1_SplR1712-1753AAAGTTCTAGTGGTACGTTAGGCGCTTCGCAGGGAGTCTAACGTACCACTAGAACTTT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACTGCTATCTTCTTT ACTCCCTGCGAAGCGCSox2_m_pr2_Cy3TGC GAA GCG CCU AAC GUA[Cy3]
4
Sox2_m_pr3_A1_SplR28-67AAAGTATCAGGAGTTGTCAAGGCAGAGAAGAGAGTGTTTGCTTGACAACTCCTGATACTTT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACTGCTATCTTCTTT CAAACACTCTCTTCTCTGCSox2_m_pr3_Cy3CTC TUC TCT GCC UTG ACA ACU C[Cy3]
5
Sox9mus musculusNM_011448.4https://www.ncbi.nlm.nih.gov/nuccore/NM_011448.4Sox9_m_pr1_A1_SplR2776-2817TGATAAAGCTCACCAATGCTCTATGTTATCTGTTTATTCCCAGCATTGGTGAGCTTTATCA TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGACCCTATCTTCTTT GGGAATAAACAGATAACATAGSox9_m_pr1_Cy5CAG AUA ACA UAG AGC ATT GGU GAG C[Cy5]
6
Sox9_m_pr2_A1_SplR1221-1260CATCTCCAACATTGAGACCTTCGACGTCAATGAGTTTGACAGGTCTCAATGTTGGAGATG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGACCCTATCTTCTTT GTCAAACTCATTGACGTCGASox9_m_pr2_Cy5TGA CGU CGA AGG UCT CAA UGT[Cy5]
7
Sox9_m_pr3_A1_SplR3541-3580CAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCGCATCTGAAACCTCTCATTTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGACCCTATCTTCTTT GACTCAGTGCTCCTCACTSox9_m_pr3_Cy5GCT CCU CAC UGC ATC UGA AAC[CY5]
8
Sftpcmus musculus NM_011359.2http://www.ncbi.nlm.nih.gov/nuccore/NM_011359.2Sftpc_m_pr7_A2_SplR521-560TGATACTGGTTCCGAGTCCGATTCTTCCGGGAGAGACCTGCGGACTCGGAACCAGTATCA TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGGCGCCTATCTTCTTT CAGGTCTCTCCCGGAAGAATSftpc_m_pr7 Cy3CGGAAGAAUCGGACUCGG[Cy3]
9
Sftpc_m_pr10_A2_SplR709-751AGAAACCGGTGGAAGTCTGTAAAGGAAAGGTGTCTCTCCTAACAGACTTCCACCGGTTTCT TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGGCGCCTATCTTCTTT TAGGAGAGACACCTTTCCTTTSftpc_m_pr10 Cy3CACCTUTCCTTTACAGACUTCCA[Cy3]
10
Sftpc_m_pr11_A2_SplR243-281CTTGAGATGAGCATCGGAGCACCGGAAACTCAGAAATCCGATGCTCATCTCAAG TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGGCGCCTATCTTCTTT TTTCTGAGTTTCCGGTGCSftpc_m_pr11 Cy3TCCGGUGCTCCGAUG[Cy3]
11
Scgb1a1mus musculusNM_011681.2http://www.ncbi.nlm.nih.gov/nuccore/NM_011681.2Scgb1a1_m_pr7_A2_SplR326-368AAGCAAGATTTAAGATTCTGAAGCTCACTGGATTTCAGAGATACTTCAGAATCTTAAATCTTGCTT ATTACTGACTCCTCTATGGTATATCTTGCGTGACGCTGCTTTCTATCTTCTTT TATCTCTGAAATCCAGTGAGScgb1a1_m_pr7_FITCAAATCCAGUGAGCUUCAGAAUCTT[FITC]Scgb1a1_m_pr7_AF750AAATCCAGUGAGCUUCAGAAUCTT[AF750]
12
Pecam1mus musculusNM_008816.3http://www.ncbi.nlm.nih.gov/nuccore/NM_008816.3Pecam1_m_pr6_A1_SplR971-1012CAAGTGACACACTTGGTCCAGGAGTTTACAGAAATTATCATCTGGACCAAGTGTGTCACTTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACATCTATCTTCTTT GATGATAATTTCTGTAAACTCCPecam1_m_pr6_Cy3TCT GUA AAC TCC UGG ACC AAG UG[Cy3]
13
Pecam1_m_pr7_A1_SplR2660-2699GAATATTCTGAGGCTGAAATGTTGTGTCTCGGATAGACAGCATTTCAGCCTCAGAATATTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACATCTATCTTCTTT CTGTCTATCCGAGACACAAPecam1_m_pr7_Cy3CCG AGA CAC AAC AUU UCA GCC[Cy3]
14
Pecam1_m_pr8_A1_SplR2549-2593CTTGTTCATGTTGGGTATACAGAGACTCAGAGGCGCTAGTTAATCTGTATACCCAACATGAACAAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACATCTATCTTCTTT TTAACTAGCGCCTCTGAGTCPecam1_m_pr8_Cy3CGC CTC UGA GTC UCT GTA UAC C[Cy3]
15
Pecam1_m_pr9_A1_SplR1125-1165GTATCTCCAAAGCCAGTAGCATCATGGTCAACATAACAGAGGCTACTGGCTTTGGAGATAC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACATCTATCTTCTTT CTCTGTTATGTTGACCATGATPecam1_m_pr9_Cy3TGA CCA UGA UGC TAC UGG CTT[Cy3]
16
Pecam1_m_pr10_A1_SplR1697-1738GATGAAGTTGTGATTTCCATCCTGTCGAGTAACGAGGTACAGGGATGGAAATCACAACTTCATC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACATCTATCTTCTTT CTGTACCTCGTTACTCGACAPecam1_m_pr10_Cy3GTT ACU CGA CAG GAU GGA AAU CAC[Cy3]
17
Cyp2f2mus musculus NM_007817.2https://www.ncbi.nlm.nih.gov/nuccore/NM_007817.2Cyp2f2_m_pr1_A1_SplR668-710CCATCATCCACTTTATCAATGACAACTTCAAGATTATGAGATTGATAAAGTGGATGATGG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTCAACTATCTTTCAA CTCATAATCTTGAAGTTGTCCyp2f2_m_pr1_FITCATCTTGAAGUTGTCATTGAUAAAGUGGA[FITC]
18
Cyp2f2_m_pr2_A1_SplR600-640CTCTGTGTCCAACATTATCTGCTCTGTCGTCTTCGGAAGATAATGTTGGACACAGAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTCAACTATCTTTCAA TCCGAAGACGACAGAGCCyp2f2_m_pr1_FITCAGACGACAGAGCAGAUAATGTTG[FITC]
19
Cyp2f2_m_pr3_A1_SplR993-1032CACACTGCGTCACGCCTTCCTTATTCTTATGAAATACGCGTGACGCAGTGTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTCAACTATCTTTCAA GTATTTCATAAGAATAAGGAAGCyp2f2_m_pr1_FITCAUAAGGAAGGCGUGACGC[FITC]
20
Foxj1mus musculus NM_008240.3http://www.ncbi.nlm.nih.gov/nuccore/NM_008240.3Foxj1_m_pr1_A1_SplR723-762ACCAAGATCACTCTGTCGGCCATCTACAAGTGGATCACGCCGACAGAGTGATCTTGGT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCATCGCTATCTTATCG CGTGATCCACTTGTAGATGGFoxj1_m_Pr1_Cy3TGTAGAUGGCCGACAGAGU[Cy3]
21
Foxj1_m_pr2_A1_SplR1331-1370GAGATGTGGATCTTACAGTCCATGGCCGGCACATCAACGACTGTAAGATCCACATCTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCATCGCTATCTTATCG GTTGATGTGCCGGCCATGFoxj1_m_Pr2_Cy3CCGGCCAUGGACTGUAAG[Cy3]
22
Foxj1_m_pr3_A1_SplR1419-1459TTGATGAGACCTTCTTGGCCACATCCTTCCTACAGCATGCCAAGAAGGTCTCATCAA TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCATCGCTATCTTATCG ATGCTGTAGGAAGGATGTGFoxj1_m_Pr3_Cy3GAAGGATGUGGCCAAGAAGG[Cy3]
23
Scgb3a1mus musculusNM_054037.2https://www.ncbi.nlm.nih.gov/nuccore/NM_054037.2Scgb3a1_m_pr1_A1_SplR215-255CTAGCCTACCATTAAGCCACTTGGCCATCCTGAGGTTCATGTGGCTTAATGGTAGGCTAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACCTCTATCTTCTTT ATGAACCTCAGGATGGCCAAScgb3a1_m_pr1_FITCGGAUGGCCAAGTGGCUTAAT[FITC]
24
Scgb3a1_m_pr2_A1_SplR280-321ATCCTCTCATAGAGGGATCCAGGAAGTGTGTCACCGAGCGGATCCCTCTATGAGAGGAT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACCTCTATCTTCTTT GCTCGGTGACACACTTCCTScgb3a1_m_pr2_FITCACACTUTCCTGGATCCCUCTA[FITC]
25
Scgb3a1_m_pr3_A1_SplR52-90GAGACTCATTCTACCATGAAGCTTACCACCACCTTTCTATTCATGGTAGAATGAGTCTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACCTCTATCTTCTTT TAGAAAGGTGGTGGTAAGCScgb3a1_m_pr3_FITCTGGTGGUAAGCTTCATGGUAG[FITC]
26
Bpifb1mus musculusNM_001012392.1https://www.ncbi.nlm.nih.gov/nuccore/NM_001012392.1Bpifb1_m_pr1_A1_SplR1286-1327GACAACCGGCTTATGCTCAACTTCAATAACGTCAGTAAGCATAAGCCGGTTGTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGACACTATCTTCTTT TACTGACGTTATTGAAGTTGBpifb1_m_pr1_FITCTATUGAAGTTGAGCAUAAGCCGG[FITC]
27
Bpifb1_m_pr2_A1_SplR356-397TGAGATACATCATATGGATGAAGGTCACCTCTGCTAACCATCCATATGATGTATCTCA TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGACACTATCTTCTTT GTTAGCAGAGGTGACCTTBpifb1_m_pr2_FITCAGAGGUGACCTTCATCCAUATGA[FITC]
28
Bpifb1_m_pr3_A1_SplR838-877CAGTAATATCCTGTTGAACCTGAAGGCCAAGCTGCTGGGTTCAACAGGATATTACTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGACACTATCTTCTTT CAGCAGCTTGGCCTTCABpifb1_m_pr3_FITCTTGGCCUTCAGGTUCAACAG[FITC]
29
Agermus musculusNM_001271423.1https://www.ncbi.nlm.nih.gov/nuccore/NM_001271423.1Ager_m_pr1_A1_SplR502-544CTGATTCCCGATGGCAAAGAAACACTCGTGAAGGAAGAGCTTTGCCATCGGGAATCAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTAACCTATCTTCTTT CTCTTCCTTCACGAGTGTTTAger_m_Pr1_Cy3ACGAGUGTTTCTTTGCCAUCG[Cy3]
30
Ager_m_pr2_A1_SplR360-399CGAGTCTACCAGATTCCTGGGAAGCCAGAAATTGTGGATCAGGAATCTGGTAGACTCG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTAACCTATCTTCTTT ATCCACAATTTCTGGCTTCCAger_m_Pr2_Cy3TCTGGCUTCCCAGGAAUCT[Cy3]
31
Ager_m_pr3_A1_SplR537-578GAGACCAGGAGACACCCTGAGACGGGACTCTTTACACTAGGGTGTCTCCTGGTCTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTAACCTATCTTCTTT AGTGTAAAGAGTCCCGTCTCAger_m_Pr3_Cy3CCCGUCTCAGGGUGTC[Cy3]
32
Etv5mus musculusNM_023794.2http://www.ncbi.nlm.nih.gov/nuccore/NM_023794.2Etv5_m_pr5_A1_SplR2721-2762TGGGAAGCAGATGTACATACTACATACATGTCACATACTTATGTACATCTGCTTCCCA TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACGTCTATCTTCTTT AGTATGTGACATGTATGTAGEtv5_m_Pr1_Cy3GTATGUAGTATGTACATCUGCTTCCC[CY3]
33
Etv5_m_pr6_A1_SplR1975-2014CCGAGTGTATGACAATCTGCGTTGATCATGGACTACAGATTGTCATACACTCGG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACGTCTATCTTCTTT GTAGTCCATGATCAACGCEtv5_m_Pr2_Cy3CATGAUCAACGCAGATTGUUCATACA[CY3]
34
Etv5_m_pr7_A1_SplR74-113CCAAGAAACTACTCAATGCTGAAGCCCTTCAAAGTGATAGAGCATTGAGTAGTTTCTTGG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCACGTCTATCTTCTTT CTATCACTTTGAAGGGCTTCEtv5_m_Pr3_Cy3GAAGGGCUTCAGCATUGAGT[CY3]
35
Ehfmus musculusNM_007914.3https://www.ncbi.nlm.nih.gov/nuccore/NM_007914.3Ehf_m_pr1_A1_SplR2574-2613CATTATAGAGCTATTGCTGTCAGAGAGTAGGTGAATCTGGGACAGCAATAGCTCTATAATG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTAGTCTATCTTCTTT CCAGATTCACCTACTCTCTEhf_m_pr1_FITC ACC TAC UCT CTG ACA GCA AUA GC[FITC]
36
Ehf_m_pr2_A1_SplR106-145CATAGGACTTCCCACCCAGAATCTTTAGGTAAATGAGATCTGGGTGGGAAGTCCTATG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTAGTCTATCTTCTTT GATCTCATTTACCTAAAGATTCEhf_m_pr2_FITCTAC CUA AAG ATT CTG GGU GGG AAG[FITC]
37
Ehf_m_pr3_A1_SplR3054-3098AGATCATCTGAGACTCCTATAGGACTTGATGAAATTAAGCAAGTATAGGAGTCTCAGATGATCT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTAGTCTATCTTCTTT CTTGCTTAATTTCATCAAGTCCEhf_m_pr3_FITC AAT TUC ATC AAG TCC UAT AGG AGU CTC AG[FITC]
38
Acta2mus musculushttps://www.ncbi.nlm.nih.gov/nuccore/NM_007392.3aSMA_m_pr1_A2_SplR1523-1562CATCAATCACTTCAACAGAGGAAGGTCCACTTAAATGATGCTCTGTTGAAGTGATTGATG TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGATCCCTATCTTCTTT CATCATTTAAGTGGACCTTCaSMA_m_pr1_FITCAGT GGA CCU TCC TCT GTU GAA G[FITC]aSMA_m_pr1_TrxAGT GGA CCU TCC TCT GTU GAA G[Trx]
39
aSMA_m_pr2_A2_SplR955-996GCATCATGAAGTGTGATATTGACATCAGGAAGGATCTCTATGCAATATCACACTTCATGATGC TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGATCCCTATCTTCTTT CATAGAGATCCTTCCTGATGTaSMA_m_pr2_FITCTCC TTC CUG ATG TCA ATA UCA CAC T[FITC]aSMA_m_pr2_Trx
TCC TTC CUG ATG TCA ATA UCA CAC T
[Trx]
40
aSMA_m_pr3_A2_SplR2207-2246CTTTGCCTATCAGAATGGGAACTACAGAGGTTTATTTGAGCCCATTCTGATAGGCAAAG TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGATCCCTATCTTCTTT CTCAAATAAACCTCTGTAGTTaSMA_m_pr3_FITCTAA ACC TCU GTA GTU CCC ATT CUG ATA G[FITC]aSMA_m_pr3_Trx
TAA ACC TCU GTA GTU CCC ATT CUG ATA G
[Trx]
41
Pdgframus musculushttps://www.ncbi.nlm.nih.gov/nuccore/NM_001083316.2Pdgfra_m_pr1_A1_SplR2880-2921GTCGATTCTACTTTCTACAATAAGATCAAGAGTGGATACCGTATTGTAGAAAGTAGAATCGAC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCCGACTATCTTCTTT CGGTATCCACTCTTGATCTPdgfra_m_pr1_FITCGTA TCC ACU CTT GAT CTU ATT GTA GAA AGU AGA ATC[FITC]
42
Pdgfra_m_pr2_A1_SplR3377-3418ATCGAGGACATCGACATGATGGATGACATTGGTATAGATTCATCATGTCGATGTCCTCGAT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCCGACTATCTTCTTT GAATCTATACCAATGTCATCCPdgfra_m_pr2_FITCCCA ATG UCA TCC ATC AUG TCG ATG [FITC]
43
Pdgfra_m_pr3_A1_SplR5583-5622AATTAGACTTGAACTACATCCGTCTTTCTAGACTCGTGGGGATGTAGTTCAAGTCTAATT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCCGACTATCTTCTTT CCACGAGTCTAGAAAGACPdgfra_m_pr3_FITCTCU AGA AAG ACG GAU GTA GUT CAA GT[FITC]
44
Lgr5mus musculushttps://www.ncbi.nlm.nih.gov/nuccore/NM_010195.2Lgr5_m_pr1_A1_SplR1325-1364CGTCTGTGATCAGTTACCTAATCTCCAAGTGCTAGATTTGTAGGTAACTGATCACAGACG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGCGACTATCTTCTTT CAAATCTAGCACTTGGAGATLgr5_m_pr1_Cy3TAG CAC TUG GAG ATU AGG TAA CUG ATC[Cy3]
45
Lgr5_m_pr2_A1_SplR974-1013CTTTGATGGACTCCACAGCCTGGAGACTTTAGATTTAAACTGTGGAGTCCATCAAAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGCGACTATCTTCTTT TTTAAATCTAAAGTCTCCAGGLgr5_m_pr2_Cy3AGT CUC CAG GCT GUG GAG[Cy3]
46
Lgr5_m_pr3_A1_SplR2629-2688CCGTGGCTTTCTTATCCTTCTCCTCTTTGCTAAACCTCAAAGGATAAGAAAGCCACGG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGCGACTATCTTCTTT TGAGGTTTAGCAAAGAGGAGLgr5_m_pr3_Cy3GTT UAG CAA AGA GGA GAA GGA UAA GAA AG[CY3]
47
Pdgfrbmus musculus
https://www.ncbi.nlm.nih.gov/nuccore/NM_001146268.1
Pdgfrb_m_pr1_A1_SplR4655-4694CGAGGAAGCAGGGTCAAGTCCTTAAACTGATCTTTCTAGGCTTGACCCTGCTTCCTCG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTTCACTATCTTCTTT CCTAGAAAGATCAGTTTAAGGAPdgfrb_m_pr1_Cy5GAT CAG UTT AAG GAC TUG ACC CTG[Cy5]
48
Pdgfrb_m_pr2_A1_SplR4091-4130CTCAGCTGGATTGCTCTACTTTGATCTTCCTAAGAATCAGGTAGAGCAATCCAGCTGAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTTCACTATCTTCTTT CTGATTCTTAGGAAGATCAAAPdgfrb_m_pr2_Cy5CTT AGG AAG AUC AAA GUA GAG CAA UCC[Cy5]
49
Pdgfrb_m_pr3_A1_SplR2665-2704GATGAATCTATAGATTACGTGCCCATGTTGGACATGAAAGCACGTAATCTATAGATTCATC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTTCACTATCTTCTTT CTTTCATGTCCAACATGGGPdgfrb_m_pr3_Cy5TCC AAC AUG GGC ACG UAA TCT ATA [CY5]
50
Gli1mus musculusNM_010296.2https://www.ncbi.nlm.nih.gov/nuccore/NM_010296.2Gli1_m_pr1_A1_SplR2561-2600CTATAGCCAGTGTCCTCGACTTGAGCATTATGGACAAGTGTCGAGGACACTGGCTATAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCTTCCTATCTTCTTT CACTTGTCCATAATGCTCAAGGli1_m_pr1_Cy3CAT AAU GCT CAA GUC GAG GAC AC[CY3]
51
Gli1_m_pr2_A1_SplR172-211CAATGACTCCACCACAAGTCAATAGCTATAGTGAGCCATACTTGTGGTGGAGTCATTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCTTCCTATCTTCTTT ATGGCTCACTATAGCTATTGGli1_m_pr2_Cy3CAC TAU AGC TAT UGA CTT GUG GTG G[CY3]
52
Gli1_m_pr3_A1_SplR493-533CTTTCATCAACTCTCGCTGTACATCTCCGGGCGGTTCACAGCGAGAGTTGATGAAAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCTTCCTATCTTCTTT GAACCGCCCGGAGATGTGli1_m_pr3_Cy3CCG GAG AUG UAC AGC GAG A [CY3]
53
Lyz2mus musculusNM_017372.3https://www.ncbi.nlm.nih.gov/nuccore/NM_017372.3Lyz2_m_pr1_A2_SplR227-266GAGACCAAAGCACTGACTATGGGATATTTCAGATCAATAAGTCAGTGCTTTGGTCTC TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGGGTACTATCTTGGTA TATTGATCTGAAATATCCCATLyz2_m_pr1_Cy5TGAAATAUCCCATAGTCAGUGCTTTG[Cy5]
54
Lyz2_m_pr2_A2_SplR84-123CAAGGTCTATGAACGTTGTGAGTTTGCCAGAACTCTGAAACACAACGTTCATAGACCTTG TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGGGTACTATCTTGGTA TTTCAGAGTTCTGGCAAACTLyz2_m_pr2_Cy5CTGGCAAACUCACAACGUTC[Cy5]
55
Lyz2_m_pr3_A2_SplR169-208TGTGTTTAGCTCAGCACGAGAGCAATTATAACACACGAGTCGTGCTGAGCTAAACACA TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGGGTACTATCTTGGTA CTCGTGTGTTATAATTGCTCLyz2_m_pr3_Cy5TTATAATUGCTCTCGTGCUGAGC[Cy5]
56
Actbmus musculus NM_007393.5https://www.ncbi.nlm.nih.gov/nuccore/NM_007393.5Actb_m_pr1_A1_SplR290-334TTGAACATGGCATTGTTACCAACTGGGACGACATGGAGGTAACAATGCCATGTTCAA TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCAGTCTATCTTCAGT TCCATGTCGTCCCAGTTActb_m_Pr1_Cy5TCGTCCCAGUTGGUAACAATG[CY5]
57
Actb_m_pr2_A1_SplR917-958CCTGTGGCATCCATGAAACTACATTCAATTCCATCATGTTTCATGGATGCCACAGG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCAGTCTATCTTCAGT CATGATGGAATTGAATGTAGActb_mus_pr2_rev_ATTO740TTG AAT GUA GTT TCA UGG ATG CCA C
[ATTO740]
58
Reg3gmus musculusNM_011260.2https://www.ncbi.nlm.nih.gov/nuccore/NM_011260.2Reg3g_m_pr1_A1_SplR170-209CTATGGCTCCTATTGCTAT GCCTTGTTTAGTGTATCTAAAATAGCAATAGGAGCCATAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCAGCGCTATCTTCTTT TTTAGATACACTAAACAAGGCReg3g_m_pr1_FITCCACUAAACAAGGCATAGCAAUAGGA[FITC]Reg3g_m_pr1_TrxCACUAAACAAGGCATAGCAAUAGGA[Trx]
59
Reg3g_m_pr2_A1_SplR314-354CAGTGGTAACAGTGGCCAAT ATGTATGGATTGGGCTCCATGATTGGCCACTGTTACCACTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCAGCGCTATCTTCTTT CATGGAGCCCAATCCATACATReg3g_m_pr2_FITCCCAAUCCATACATATUGGCCACTG[FITC]Reg3g_m_pr2_TrxCCAAUCCATACATATUGGCCACTG[Trx]
60
Reg3g_m_pr3_A1_SplR488-529AGGATTTCTGAAGTGGAGA GAGAATTATTGTAACTTAGAGTTTCTCCACTTCAGAAATCCT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCAGCGCTATCTTCTTT AACTCTAAGTTACAATAATTCTCReg3g_m_pr3_FITCGTTACAAUAATTCTCTCTCCACUTCAGA[FITC]Reg3g_m_pr3_Trx
GTTACAAUAATTCTCTCTCCACUTCAGA
[Trx]
61
Muc5bmus musculusNM_028801.2https://www.ncbi.nlm.nih.gov/nuccore/NM_028801.2Muc5B_m_pr1_A1_SplR11156-11197GCTTTAACTACAATATACGTGT GCTTTGCTGTGATGACTATAACACGTATATTGTAGTTAAAGC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCTAGCTATCTTCTTT TATAGTCATCACAGCAAAGCMuc5b_m_pr1_FITCCACAGCAAAGCACACGTAUATTG[FITC]
62
Muc5B_m_pr2_A1_SplR10839-10880CATGACATCTACCCTACCAGTAACTGTGACTAATGCTACTACCTGGTAGGGTAGATGTCATG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCTAGCTATCTTCTTT GTAGTAGCATTAGTCACAGTTAMuc5b_m_pr2_FITCAGTCACAGUTACTGGUAGGGTAG[FITC]
63
Muc5B_m_pr3_A1_SplR4532-4571CATTCACTTCAAACAGCAGACTCACTTCAACTTCTATGTCTCTGCTGTTTGAAGTGAATG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCTAGCTATCTTCTTT GACATAGAAGTTGAAGTGAGMuc5b_m_pr3_FITCGTTGAAGUGAGTCTGCUGTTTG[FITC]
64
Tff2mus musculusNM_009363.3https://www.ncbi.nlm.nih.gov/nuccore/NM_009363.3TFF2_m_pr1_A1_SplR365-404CTGATCTTTGAAGTGCCCTGGTGTTTCTTCCCACAGTCTGCAGGGCACTTCAAAGATCAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTGTCCTATCTTCTTT CAGACTGTGGGAAGAAACACTff2_m_pr1_FITCGAAGAAACACCAGGGCACUT[FITC]
65
TFF2_m_pr2_A1_SplR180-219GTGAGCAGTGCTTTGATCTTGGATGCTGCTTTGACTCTAGAAGATCAAAGCACTGCTCAC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTGTCCTATCTTCTTT CTAGAGTCAAAGCAGCATCCTff2_m_pr2_FITCAGCAGCAUCCAAGAUCAAAGC[FITC]
66
TFF2_m_pr3_A1_SplR463-503CAAGCCAGAAGAAAGTTTCAACCAGACTTCATCAATCTCTGTTGAAACTTTCTTCTGGCTTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTGTCCTATCTTCTTT CAGAGATTGATGAAGTCTGGTff2_m_pr3_FITCGATGAAGUCTGGTTGAAACUTTCTTC[FITC]
67
Hpmus musculusNM_001329965.1https://www.ncbi.nlm.nih.gov/nuccore/NM_001329965.1Hp_m_pr1_A1_SplR676-715AGAGTCATGCCTATCTGCCTGCCTTCCAAAGACTACATAGGGCAGATAGGCATGACTCT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCCTACTATCTTCTTT CTATGTAGTCTTTGGAAGGCAHp_m_pr1_FITCTUGGAAGGCAGGCAGAUAG[FITC]Hp_m_pr1_TrxTUGGAAGGCAGGCAGAUAG[Trx]
68
Hp_m_pr2_A1_SplR224-263CAATGATGCCATGGACTTTGAAGATGACAGCTGCCCAAAGTCAAAGTCCATGGCATCATTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCCTACTATCTTCTTT CTTTGGGCAGCTGTCATCTHp_m_pr2_FITCAGCTGUCATCTTCAAAGUCCATG[FITC]Hp_m_pr2_TrxAGCTGUCATCTTCAAAGUCCATG[Trx]
69
Hp_m_pr3_A1_SplR1080-1120GAAGGACTGGGTTCAGGAAACCATGGCCAAGAACTAGTTCATTTCCTGAACCCAGTCCTTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCCTACTATCTTCTTT TGAACTAGTTCTTGGCCATGGHp_m_pr3_FITCTTGGCCAUGGTTTCCUGAAC[FITC]Hp_m_pr3_TrxTTGGCCAUGGTTTCCUGAAC[Trx]
70
Atp8a1mus musculusNM_009727.3https://www.ncbi.nlm.nih.gov/nuccore/NM_009727.3Atp8a1_m_pr1_A1_SplR542-589AGCTGTGGCTGCTATTAAAGAGATAATAGAAGATATTAAACGTTTAATAGCAGCCACAGCT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGTGACTATCTTCTTT CGTTTAATATCTTCTATTATCTCAtp8a1_m_pr1_Cy5TCTTCTAUTATCTCTTTAAUAGCAGCCAC[Cy5]
71
Atp8a1_m_pr2_A1_SplR4920-4961AATGAATACTTACCATCATAAGTAGGGTTCACTGATACGTTTCTTATGATGGTAAGTATTCATT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGTGACTATCTTCTTT AAACGTATCAGTGAACCCTAAtp8a1_m_pr2_Cy5CAGUGAACCCTACTTATGAUGGTAA[Cy5]
72
Atp8a1_m_pr3_A1_SplR6589-6627GTAAAGAGTCAGGGCGTTGTCTCAGCATTTGATGATATAAACGCCCTGACTCTTTAC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGTGACTATCTTCTTT TATATCATCAAATGCTGAGACAtp8a1_m_pr3_Cy5GCUGAGACAACGCCCUG[Cy5]
73
Lgr6mus musculusNM_001033409.3https://www.ncbi.nlm.nih.gov/nuccore/NM_001033409.3Lgr6_m_pr1_A1_SplR3241-3282AATACTTCTGACAGAGGCCTGGGAAATTTGCATAGGAGAAAGAGGCCTCTGTCAGAAGTATT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGGGGCTATCTTCTTT TTTCTCCTATGCAAATTTCCCLgr6_m_pr1_Cy5CAAATUTCCCAGGCCUCTGT[Cy5]
74
Lgr6_m_pr2_A1_SplR3449-3490ATTAATCTTGACCTATGCTGTGCCAAAGTGCTTCCTGTTAAACACAGCATAGGTCAAGATTAAT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGGGGCTATCTTCTTT TTTAACAGGAAGCACTTTGGLgr6_m_pr2_Cy5AGCACTUTGGCACAGCAUAG[Cy5]
75
Lgr6_m_pr3_A1_SplR2751-2790CTTTCTCAGATGTGGATCTTATTCTGGAAGCTTCTGAGGCTAAGATCCACATCTGAGAAAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGGGGCTATCTTCTTT GCCTCAGAAGCTTCCAGAALgr6_m_pr3_Cy5GAAGCUTCCAGAATAAGAUCCACATC[Cy5]
76
Ascl1mus musculusNM_008553.4https://www.ncbi.nlm.nih.gov/nuccore/NM_008553.4Ascl1_m_pr1_A1_SplR1230-1269AGGAACAAGAGCTGCTGGACTTTACCAACTGGTTCTGAGTCCAGCAGCTCTTGTTCCT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCAAGACTATCTTCTTT CTCAGAACCAGTTGGTAAAGAscl1_m_pr1_Cy5GTTGGUAAAGUCCAGCAGCT[Cy5]
77
Ascl1_m_pr2_A1_SplR1600-1639CACACAGACAGACACTATATTAACTCCCAACCACTAACAATATAGTGTCTGTCTGTGTG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCAAGACTATCTTCTTT TGTTAGTGGTTGGGAGTTAAscl1_m_pr2_Cy5TGGTUGGGAGTTAAUATAGTGTCUGT[Cy5]
78
Ascl1_m_pr3_A1_SplR1751-1791CGATCTATGGACATTTGCCTCCATTGAAGCAACGTCAGGGCAAATGTCCATAGATCG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCAAGACTATCTTCTTT CTGACGTTGCTTCAATGGAAscl1_m_pr1_Cy5GCTTCAAUGGAGGCAAAUGTC[Cy5]
79
Nkd1mus musculus NM_001163660.1
https://www.ncbi.nlm.nih.gov/nuccore/NM_001163660.1
Nkd1_m_pr1_A1_SplR2219-2260GCCTGTCCATGTCTCTGTATCTTTCTATAAATACACTCTCAGATACAGAGACATGGACAGG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTATGCTATCTTCTTT CTGAGAGTGTATTTATAGAAAGNkd1_m_pr1_Cy3GTGTATTUATAGAAAGAUACAGAGACAUGGAC[CY3]
80
Nkd1_m_pr2_A1_SplR3777-3818CTCTAAGCCTTTATGCGCTACCTTGATCTCTTACAGGTGAACGCGCATAAAGGCTTAGAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTATGCTATCTTCTTT CCTGTAAGAGATCAAGGTANkd1_m_pr2_Cy3AGAUCAAGGUAGCGCAUAAAGG[CY3]
81
Nkd1_m_pr3_A1_SplR375-415CTCTATATGACTTCGACAACAATGGCAAAGTGACCCGTGAGGTTGTCGAAGTCATATAGAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTATGCTATCTTCTTT ACGGGTCACTTTGCCATTNkd1_m_pr3_Cy3ACTTUGCCATTGTTGUCGAAGT[CY3]
82
Fzd7mus musculus NM_008057.3https://www.ncbi.nlm.nih.gov/nuccore/NM_008057.3Fzd7_m_pr1_A1_SplR4144-4184CAAGAGGAATGATAGCGAAGGAAGAGGAGAGTTTGAGTCAGCCTTCGCTATCATTCCTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCAAGCTATCTTCTTT TGACTCAAACTCTCCTCTTFzd7_m_pr1_Cy5ACTCTCCUCTTCCUTCGCUATC[Cy5]
83
Fzd7_m_pr2_A1_SplR2766-2806CTAAGACTTGCAGGACGATGCTAACTGTGAAAGATATGGACATCGTCCTGCAAGTCTTAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCAAGCTATCTTCTTT CCATATCTTTCACAGTTAGCFzd7_m_pr2_Cy5ACAGTUAGCATCGUCCTGC[Cy5]
84
Fzd7_m_pr3_A1_SplR2136-2175CTTTGTGTCTCTCTTTCGCATCCGCACCATCATGAAGCACATGCGAAAGAGAGACACAA TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCAAGCTATCTTCTTT GCTTCATGATGGTGCGGFzd7_m_pr3_Cy5ATGGUGCGGAUGCGAAA[Cy5]
85
Tuba1amus musculusNM_011653.2https://www.ncbi.nlm.nih.gov/nuccore/NM_011653.2Tuba1a_m_pr1_A1_SplR1379-1420GGGAGGAAGAAGGAGAGGAATACTAAATTAAATGTCACAAGGATTCCTCTCCTTCTTCCT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTCCGCTATCTTCTTT CCTTGTGACATTTAATTTAGTTuba1a_m_pr1_Cy3TGACATTTAAUTTAGTATTCCUCTCCTTCTUC[Cy3]
86
Tuba1a_m_pr2_A1_SplR716-755CCTACACTAACCTAAACAGGTTGATAGGTCAAATTGTGTCCCTGTTTAGGTTAGTGTAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTCCGCTATCTTCTTT GACACAATTTGACCTATCAATuba1a_m_pr2_Cy3ATTTGACCUATCAACCUGTTTAGGTUAG[Cy3]
87
Tuba1a_m_pr3_A1_SplR651-692CTTCATGGTAGACAATGAGGCCATCTATGATATCTGTCGCTCATTGTCTACCATGAAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCTCCGCTATCTTCTTT CGACAGATATCATAGATGGCTuba1a_m_pr3_Cy3TATCAUAGATGGCCUCATTGTCUACC[Cy3]
88
Cyp4b1mus musculusNM_007823.2https://www.ncbi.nlm.nih.gov/nuccore/NM_007823.2Cyp4b1_m_pr1_A2_SplR350-389CTGCATATGTGTATGACTTCTTCCTCCAGTGGATCGGAAAGAAGTCATACACATATGCAG TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGACTACTATCTTCTTT CCGATCCACTGGAGGAACyp4b1_m_pr1_Cy3CCACUGGAGGAAGAAGUCATAC[CY3]
89
Cyp4b1_m_pr2_A2_SplR1547-1587GAAAGTAGGTCTTAGGAGAGCAAGGATATGGAGTCATTGTGCTCTCCTAAGACCTACTTT TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGACTACTATCTTCTTT ACAATGACTCCATATCCTTGCyp4b1_m_pr2_Cy3TCCAUATCCTTGCUCTCCUAAGAC[CY3]
90
Cyp4b1_m_pr2_A2_SplR291-330CCTGAACATCTATGAGCCTGACTATGCTAAAGCTGTATACAGGCTCATAGATGTTCAGG TCCTCTATGATTACTGACGTATATCTTGCGTGACGCTGACTACTATCTTCTTT GTATACAGCTTTAGCATAGTCCyp4b1_m_pr3_Cy3CTTUAGCATAGUCAGGCTCAUAGATG[CY3]
91
Lgi3mus musculusNM_145219.4https://www.ncbi.nlm.nih.gov/nuccore/NM_145219.4Lgi3_m_pr1_A1_SplR532-572CTCTAACAAGTTCACACTGATTGGAGACAATGCCTTCATAGTCAGTGTGAACTTGTTAGAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGTCCCTATCTTCTTT TATGAAGGCATTGTCTCCAALgi3_m_pr1_Cy5CATTGUCTCCAAUCAGTGUGAACT[CY5]
92
Lgi3_m_pr2_A1_SplR604-644GAACAATGACATCTGGGCTCTCTCCAAGTTTACCTTCAGAGGAGCCCAGATGTCATTGTT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGTCCCTATCTTCTTT CTCTGAAGGTAAACTTGGAGALgi3_m_pr2_Cy5ACTUGGAGAGAGCCCAGA[CY5]
93
Lgi3_m_pr3_A1_SplR953-992GAACCTTTCCTTTACTCTAGTGACCTCTACTTGGCTCTGGACTAGAGTAAAGGAAAGGTTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCGTCCCTATCTTCTTT CAGAGCCAAGTAGAGGTCLgi3_m_pr3_Cy5CCAAGUAGAGGUCACTAGAGUAAAGG[CY5]
94
Sftpbmus musculusNM_001282071.2https://www.ncbi.nlm.nih.gov/nuccore/NM_001282071.2Sftpb_m_pr1_A1_SplR232-271CATCTTCCTTGGTCATCTTTGTGAGGAGGTGGACAATATCCAAAGATGACCAAGGAAGATG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCGTCCTATCTTCTTT GATATTGTCCACCTCCTCASftpb_m_pr1_FITCCACCUCCTCACAAAGAUGACC[FITC]
95
Sftpb_m_pr2_A1_SplR814-855CTACAGGACACTGAGTGCCATTTCTGCAAGTCTGTGATCAACTGGCACTCAGTGTCCTGTAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCGTCCTATCTTCTTT GTTGATCACAGACTTGCAGAAASftpb_m_pr2_FITCCTUGCAGAAATGGCACUCAG[FITC]
96
Sftpb_m_pr3_A1_SplR1432-1473CCCTTGCTAACATTTCTATGAAATCCAAACTTGAGAAGAATATCATAGAAATGTTAGCAAGG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCGTCCTATCTTCTTT TATTCTTCTCAAGTTTGGATTSftpb_m_pr3_FITCTCAAGTUTGGATTTCATAGAAAUGTTAGC[FITC]
97
Napsamus musculus NM_008437.1https://www.ncbi.nlm.nih.gov/nuccore/NM_008437.1Napsa_m_pr1_A1_SplR1177-1217GACTATGTCATCAAGATTCTTCAGAGCGATGTTGGCCTCTGTGAAGAATCTTGATGACATAGTC TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCACGCTATCTTCTTT CAGAGGCCAACATCGCTCNapsa_m_pr1_Cy3CCAACAUCGCTCUGAAGAAUCTT[CY3]
98
Napsa_m_pr2_A1_SplR268-307CTTGGACACAGAATCTTAAACCCACTGAATGGATGGGAACGTTTAAGATTCTGTGTCCAAG TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCACGCTATCTTCTTT GTTCCCATCCATTCAGTGGNapsa_m_pr2_Cy3CCA TTC AGU GGG TTT AAG AUT CTG T[CY3]
99
Napsa_m_pr3_A1_SplR478-517AGATGTCATTTCTTCAGTTTGGCATGCTGGTTTCACCATCAAACTGAAGAAATGACATCT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCCACGCTATCTTCTTT ATGGTGAAACCAGCATGCNapsa_m_pr3_Cy3ACCAGCAUGCCAAACUGAA[CY3]
100
Cldn18mus musculusNM_001194922.1https://www.ncbi.nlm.nih.gov/nuccore/NM_001194922.1Cldn18_m_pr1_A1_SplR2459-2503ATTATCTGAAATGGCATAAAGAATGAACAGACCAAACAATTTAATCTTTATGCCATTTCAGATAAT TCCTCTATGATTACTGACTGCGTCTATTTAGTGGAGCCAAGCCTATCTTCTTT TTAAATTGTTTGGTCTGTTCATCldn18_m_pr1_FITCTTGGUCTGTTCAUTCTTTAUGCCATT[FITC]