| A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | |
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1 | Table adapted from Rickelt S and Hynes RO, Matrix Biol, 2018 | |||||||||||||||||||||||||
2 | https://doi.org/10.1016/j.matbio.2018.04.011 | |||||||||||||||||||||||||
3 | Notes: | |||||||||||||||||||||||||
4 | Antibodies to extracellular matrix proteins tested on formaldehyde-fixed and paraffin-embedded (FFPE) tissue samples using immunohistochemistry (IHC). This table provides an overview of all tested antibodies that showed positive staining signals. Presented are our IHC validation information and results, however, we have not validated the molecular specificity of every antibody (see text). | |||||||||||||||||||||||||
5 | Antibody host species (gt, goat; m, mouse monoclonal antibody; rb, rabbit; rbM, rabbit monoclonal antibody; rt, rat; sh, sheep). | |||||||||||||||||||||||||
6 | Heat-induced epitope retrieval (HIER) method used (0.05% Tween in Citric acid, pH 6.0 or Tris, pH 9.0) or protease treatment (Tris, pH 9.0 + Pepsin treatment); for details see Supplementary Materials and Methods. Individual antibody dilutions recommended, the human and mouse reactivity as well as a positive control tissue, additional notes and references are listed. | |||||||||||||||||||||||||
7 | Additional abbreviations used: CRC, colorectal cancer; NT, not tested; PDAC, pancreatic ductal adenocarcinoma; TEB terminal end buds. | |||||||||||||||||||||||||
8 | * Indicates the preferred HIER method ECM-affiliatedplied for the individual antibody, however, other conditions also might work. | |||||||||||||||||||||||||
9 | ** Indicates the antibody dilution we have tested; however, each antibody vial should be tested for individual ECM-affiliatedplication and tissue since lot-specific variability can occur. For additional details on the individual antibodies see also the manufacturers datasheets. | |||||||||||||||||||||||||
10 | ‡ A representative image of the staining with the antibody is shown in the Supplementary Figure Gallery. | |||||||||||||||||||||||||
11 | ||||||||||||||||||||||||||
12 | Protein name | Gene Symbol | Matrisome Division | Matrisome Category | Host | Company | Catalog number | URL | HIER method * | Dilution ** | Human reactivity | Mouse reactivity | Positive control tissue | Additional notes | Suppl. Figure Gallery page #; also available at https://doi.org/10.1016/j.matbio.2018.04.011 | |||||||||||
13 | Agrin | AGRN | Core Matrisome | ECM Glycoproteins | rb | Novus Biologicals | NBP1-90209 | https://www.novusbio.com/products/agrin-antibody_nbp1-90209 | Tris, pH9.0 + Pepsin | 1:400 | YES ‡ | YES ‡ | kidney, lung | 4, 5 | ||||||||||||
14 | Agrin | AGRN | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab85174 | https://www.abcam.com/products/primary-antibodies/agrin-antibody-ab85174.html | Tris, pH9.0 + Pepsin | 1:1000-1:2000 | YES ‡ | YES ‡ | kidney, lung | 6, 7 | ||||||||||||
15 | Agrin | AGRN | Core Matrisome | ECM Glycoproteins | gt | R&D Systems | AF550 | https://www.rndsystems.com/products/rat-agrin-antibody_af550 | Tris, pH9.0 + Pepsin | 1:250-1:500 | occasional basal lamina stain | YES ‡ | kidney, lung | works on frozen tissues | 10 | |||||||||||
16 | Cartilage oligomeric matrix protein | COMP | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab74524 | https://www.abcam.com/products/primary-antibodies/compcartilage-oligomeric-matrix-protein-antibody-ab74524.html?productWallTab=ShowAll | Tris, pH9.0 | 1:250 | YES ‡ | YES ‡ | cartilage, CRC, PDAC | 18, 19 | ||||||||||||
17 | Cartilage oligomeric matrix protein | COMP | Core Matrisome | ECM Glycoproteins | rt | Abcam | ab11056 | https://www.abcam.com/products/primary-antibodies/compcartilage-oligomeric-matrix-protein-antibody-ma37c94-hc484d1-ab11056.html?productWallTab=ShowAll | Tris, pH9.0 | 1:10 | YES ‡ | NO | cartilage, CRC, PDAC | 20 | ||||||||||||
18 | Dermatopontin | DPT | Core Matrisome | ECM Glycoproteins | rb | ABclonal | A8643 | https://abclonal.com/catalog-antibodies/DPTRabbitpAb/A8643 | Citric, pH6.0 | 1:1000-1:2000 | YES ‡ | NT | liver, placental cord | 41 | ||||||||||||
19 | EGF-containing fibulin-like extracellular matrix protein 1 | EFEMP1 | Core Matrisome | ECM Glycoproteins | rb | Thermo Fisher Scientific | PA5-29347 | https://www.thermofisher.com/antibody/product/Fibulin-3-Antibody-Polyclonal/PA5-29347 | Tris, pH9.0 | 1:250 | YES ‡ | NT | kidney, lung | 42 | ||||||||||||
20 | EGF-containing fibulin-like extracellular matrix protein 2 | EFEMP2 | Core Matrisome | ECM Glycoproteins | rbM | Abcam | ab125073 | https://www.abcam.com/products/primary-antibodies/fibulin-4-antibody-epr6842-ab125073.html?productWallTab=ShowAll | Tris, pH9.0 | 1:500 | YES ‡ | NO | colon, pancreas | 43 | ||||||||||||
21 | Elastin | ELN | Core Matrisome | ECM Glycoproteins | m | Abcam | ab77804 | https://www.abcam.com/products/primary-antibodies/elastin-antibody-10b8-ab77804.html?productWallTab=ShowAll | Citric, pH6.0 | 1:250-1:500 | YES ‡ | NT | colon | 44 | ||||||||||||
22 | Elastin | ELN | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab21610 | https://www.abcam.com/products/primary-antibodies/elastin-antibody-ab21610.html?productWallTab=ShowAll | Citric, pH6.0 | 1:250-1:500 | YES | NT | colon | |||||||||||||
23 | Elastin microfibril interfacer 1 | EMILIN1 | Core Matrisome | ECM Glycoproteins | rb | Sigma-Aldrich | HPA002822 | https://www.sigmaaldrich.com/US/en/product/sigma/hpa002822 | Tris, pH9.0 | 1:500-1:1000 | YES ‡ | NO | endometrium, intestine | 45 | ||||||||||||
24 | Fibulin 1 | FBLN1 | Core Matrisome | ECM Glycoproteins | m | Abcam | ab211536 | https://www.abcam.com/products/primary-antibodies/fibulin-1-antibody-cl0337-ab211536.html?productWallTab=ShowAll | Tris, pH9.0 | 1:50-1:75 | YES - but weak ‡ | NO | CRC, lung | 65 | ||||||||||||
25 | Fibulin 2 | FBLN2 | Core Matrisome | ECM Glycoproteins | rb | Novus Biologicals | NBP1-33479 | https://www.novusbio.com/products/fibulin-2-antibody_nbp1-33479 | Tris, pH9.0 | 1:500 | YES ‡ | NO | lung | 66 | ||||||||||||
26 | Fibulin 5 | FBLN5 | Core Matrisome | ECM Glycoproteins | rbM | Abcam | ab109428 | https://www.abcam.com/products/primary-antibodies/fibulin-5-antibody-epr4506-ab109428.html?productWallTab=ShowAll | Tris, pH9.0 | 1:750 | YES ‡ | YES ‡ | intestine, lung | 67, 68 | ||||||||||||
27 | Fibronectin 1 | FN1 | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab2413 | https://www.abcam.com/products/primary-antibodies/fibronectin-antibody-ab2413.html?productWallTab=ShowAll | Tris, pH9.0 | 1:10000 | YES ‡ | YES ‡ | CRC, placenta | 52, 53 | ||||||||||||
28 | Fibronectin 1 - EIIIA/ED1 | FN1 | Core Matrisome | ECM Glycoproteins | m | Abcam | ab6328 | https://www.abcam.com/products/primary-antibodies/fibronectin-antibody-ist-9-bsa-and-azide-free-ab6328.html?productWallTab=ShowAll | Tris, pH9.0 | 1:100 | YES ‡ | NO - unclear due to background stain | placenta / CRC | 56 | ||||||||||||
29 | Fibronectin 1 - EIIIA/ED1 | FN1 | Core Matrisome | ECM Glycoproteins | m | Sigma-Aldrich | F6140 | https://www.sigmaaldrich.com/US/en/product/sigma/f6140 | Tris, pH9.0 | 1:400 | YES ‡ | NT | placenta / CRC | 57 | ||||||||||||
30 | Laminin (pan) | - | Core Matrisome | ECM Glycoproteins | rb | Novus Biologicals | NB300-144 | https://www.novusbio.com/products/laminin-antibody_nb300-144 | Tris, pH9.0 | 1:500 | YES ‡ | YES ‡ | CRC, intestine, pancreas | 77, 78 | ||||||||||||
31 | Laminin (pan) | - | Core Matrisome | ECM Glycoproteins | rb | Sigma-Aldrich | L9393 | https://www.sigmaaldrich.com/US/en/product/sigma/l9393 | Tris, pH9.0 | 1:100-1:200 | NT | YES ‡ | CRC, intestine, pancreas | 79 | ||||||||||||
32 | Laminin (pan) | - | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab11575 | https://www.abcam.com/products/primary-antibodies/laminin-antibody-ab11575.html?productWallTab=ShowAll | Tris, pH9.0 | 1:1000-1:2000 | NT | YES ‡ | CRC, intestine, pancreas | 80 | ||||||||||||
33 | Laminin, α1 | LAMA1 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91117 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lama1-antibody-amab91117/?q=&t= | Citric, pH6.0 | 1:250 | YES - but weak ‡ | NO | CRC, PDAC | 81 | ||||||||||||
34 | Laminin, α2 | LAMA2 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91166 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lama2-antibody-amab91166/?q=&t= | Tris, pH9.0 | 1:100 | YES | NO | CRC, PDAC, placenta | |||||||||||||
35 | Laminin, α2 | LAMA2 | Core Matrisome | ECM Glycoproteins | m | Novus Biologicals | H00003908-M01 | https://www.novusbio.com/products/laminin-alpha-2-antibody-2d4_h00003908-m01 | Tris, pH9.0 | 1:750-1:1000 | YES ‡ | NO | CRC, PDAC, placenta | 82 | ||||||||||||
36 | Laminin, α3 | LAMA3 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91123 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lama3-antibody-amab91123/?q=&t= | Citric, pH6.0 | 1:250 | YES ‡ | NO | CRC, PDAC | 83 | ||||||||||||
37 | Laminin, α4 | LAMA4 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91133 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lama4-antibody-amab91133/?q=&t= | Tris, pH9.0 | 1:250-1:500 | YES ‡ | NO | CRC, PDAC | 84 | ||||||||||||
38 | Laminin, α5 | LAMA5 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91124 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lama5-antibody-amab91124/?q=&t= | Tris, pH9.0 | 1:250-1:500 | YES ‡ | NO | CRC, PDAC | 85 | ||||||||||||
39 | Laminin, β1 | LAMB1 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91092 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lamb1-antibody-amab91092/?q=&t= | Citric, pH6.0 | 1:100-1:200 | YES ‡ | NO | CRC, PDAC | 86 | ||||||||||||
40 | Laminin, β2 | LAMB2 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91096 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lamb2-antibody-amab91096/?q=&t= | Tris, pH9.0 | 1:1500 | YES ‡ | NO | CRC, PDAC | 87 | ||||||||||||
41 | Laminin, β3 | LAMB3 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91161 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lamb3-antibody-amab91161/?q=&t= | Tris, pH9.0 | 1:250 | YES ‡ | NO | CRC, placental membrane | 88 | ||||||||||||
42 | Laminin, γ1 | LAMC1 | Core Matrisome | ECM Glycoproteins | m | Atlas Antibodies | AMAb91137 | https://www.atlasantibodies.com/products/antibodies/primary-antibodies/precisa-monoclonals/lamc1-antibody-amab91137/?q=&t= | Citric, pH6.0 | 1:100 | YES ‡ | NT | CRC, PDAC | 89 | ||||||||||||
43 | Latent transforming growth factor β binding protein 1 | LTBP1 | Core Matrisome | ECM Glycoproteins | m | R&D Systems | MAB388 | https://www.rndsystems.com/products/human-latent-tgf-beta-bp1-antibody-35409_mab388 | Tris, pH9.0 + Pepsin | 1:20 | YES ‡ | NT | lung | 92 | ||||||||||||
44 | Latent transforming growth factor β binding protein 2 | LTBP2 | Core Matrisome | ECM Glycoproteins | rb | Novus Biologicals | NBP1-88411 | https://www.novusbio.com/products/latent-tgf-beta-bp2-ltbp-2-antibody_nbp1-88411 | Tris, pH9.0 | 1:200 | YES ‡ | YES | CRC, lung | 94 | ||||||||||||
45 | Latent transforming growth factor β binding protein 2 | LTBP2 | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab121193 | https://www.abcam.com/products/primary-antibodies/ltbp2-antibody-ab121193.html?productWallTab=ShowAll | Tris, pH9.0 | 1:100-1:200 | YES | NT | CRC, lung | |||||||||||||
46 | Milk fat globule-EGF factor 8 protein | MFGE8 | Core Matrisome | ECM Glycoproteins | m | R&D Systems | MAB27671 | https://www.rndsystems.com/search?keywords=+MAB27671 | Citric, pH6.0 | 1:250-1:500 | YES ‡ | NT | endometrium, pancreas | 109 | ||||||||||||
47 | Nidogen 2 | NID2 | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab14513 | https://www.abcam.com/products/primary-antibodies/nidogen-2nid-2-antibody-ab14513.html?productWallTab=ShowAll | Tris, pH9.0 | 1:2000-1:4000 | NT | YES ‡ | mouse mammary tissue, TEB | 115 | ||||||||||||
48 | Periostin | POSTN | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab14041 | https://www.abcam.com/products/primary-antibodies/periostin-antibody-ab14041.html?productWallTab=ShowAll | Tris, pH9.0 | 1:500-1:1000 | YES ‡ | YES ‡ | CRC, intestine | 116, 117 | ||||||||||||
49 | Secreted protein, acidic, cysteine-rich (osteonectin) | SPARC | Core Matrisome | ECM Glycoproteins | rbM | Cell Signaling | 8725 | https://www.cellsignal.com/products/primary-antibodies/sparc-d10f10-rabbit-mab/8725 | Citric, pH6.0 | 1:100 | YES ‡ | NT | cartilage, CRC, endometrium | the indivudual antibodies show varying staining pattern | 131 | |||||||||||
50 | Secreted protein, acidic, cysteine-rich (osteonectin) | SPARC | Core Matrisome | ECM Glycoproteins | rb | Sino Biological | 10929-RP02 | https://www.sinobiological.com/antibodies/human-sparc-10929-rp02 | Tris, pH9.0 | 1:500 | YES ‡ | NT | cartilage, CRC, endometrium | the indivudual antibodies show varying staining pattern | 131 | |||||||||||
51 | Secreted protein, acidic, cysteine-rich (osteonectin) | SPARC | Core Matrisome | ECM Glycoproteins | gt | R&D Systems | AF942 | https://www.rndsystems.com/products/mouse-sparc-antibody_af942 | Tris, pH9.0 | 1:200 | NO | YES | cartilage, CRC, endometrium | the indivudual antibodies show varying staining pattern | ||||||||||||
52 | Secreted phosphoprotein 1 (osteopontin) | SPP1 | Core Matrisome | ECM Glycoproteins | m | Abcam | ab166709 | https://www.abcam.com/products/primary-antibodies/osteopontin-antibody-7c5h12-ab166709.html?productWallTab=ShowAll | Tris, pH9.0 | 1:200 | YES ‡ | NT | bone, cartilage, CRC, kidney | 133 | ||||||||||||
53 | secreted phosphoprotein 1 (osteopontin) | SPP1 | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab8448 | https://www.abcam.com/products/primary-antibodies/osteopontin-antibody-ab8448.html?productWallTab=ShowAll | Citric, pH6.0 | 1:1000-1:2000 | YES ‡ | NT | bone, cartilage, CRC, kidney | 134 | ||||||||||||
54 | Sushi-repeat-containing protein, X-linked 2 | SRPX2 | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab91584 | https://www.abcam.com/products/primary-antibodies/srpx2-antibody-ab91584.html?productWallTab=ShowAll | Tris, pH9.0 | 1:5000 | YES ‡ | YES | endometrium, placenta | 138 | ||||||||||||
55 | Transforming growth factor, β-induced, 68kDa | TGFBI | Core Matrisome | ECM Glycoproteins | rb | Sigma-Aldrich | HPA017019 | https://www.sigmaaldrich.com/US/en/product/sigma/hpa017019 | Tris, pH9.0 | 1:250:1-500 | YES ‡ | NT | CRC, placenta | 150, 151 | ||||||||||||
56 | Thrombospondin 2 | THBS2 | Core Matrisome | ECM Glycoproteins | m | BD Biosciences | 611150 | https://www.bdbiosciences.com/en-us/products/reagents/microscopy-imaging-reagents/immunofluorescence-reagents/purified-mouse-anti-mouse-thrombospondin-2.611150 | Tris, pH9.0 | 1:200-1:500 | YES - matrix and epithelial cells | NT | CRC, PDAC | |||||||||||||
57 | Thrombospondin 2 | THBS2 | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab112543 | https://www.abcam.com/products/primary-antibodies/thrombospondin-2-antibody-ab112543.html?productWallTab=ShowAll | Tris, pH9.0 | 1:100-1:200 | YES | NT | CRC, PDAC | |||||||||||||
58 | Thrombospondin 2 | THBS2 | Core Matrisome | ECM Glycoproteins | rb | Thermo Fisher Scientific | PA5-50843 | https://www.thermofisher.com/antibody/product/Thrombospondin-2-Antibody-Polyclonal/PA5-50843 | Tris, pH9.0 | 1:500 | YES ‡ | YES ‡ | CRC, PDAC | 144, 145 | ||||||||||||
59 | Tenascin C | TNC | Core Matrisome | ECM Glycoproteins | rbM | Abcam | ab108930 | https://www.abcam.com/products/primary-antibodies/tenascin-c-antibody-epr4219-ab108930.html?productWallTab=ShowAll | Tris, pH9.0 | 1:1500 | YES ‡ | YES ‡ | CRC, placenta | 139, 140 | ||||||||||||
60 | Tenascin C | TNC | Core Matrisome | ECM Glycoproteins | rt | Sigma-Aldrich | T3413 | https://www.sigmaaldrich.com/US/en/product/sigma/t3413 | Tris, pH9.0 | 1:250-1:500 | NO | YES ‡ | mouse tumor tissues | specific for mouse tissues | 141 | |||||||||||
61 | Tenascin N | TNN | Core Matrisome | ECM Glycoproteins | rb | Abcam | ab121887 | https://www.abcam.com/products/primary-antibodies/tenascin-n-antibody-ab121887.html?productWallTab=ShowAll | Tris, pH9.0 | 1:250 | YES ‡ | NT | skin | 142 | ||||||||||||
62 | Tenascin X | TNX | Core Matrisome | ECM Glycoproteins | sh | R&D Systems | AF6999 | https://www.rndsystems.com/products/human-tenascin-x-antibody_af6999 | Tris, pH9.0 | 1:100 | YES - but weak | NT | CRC, lung mesothelioma | |||||||||||||
63 | Collagen, type I (pan) | - | Core Matrisome | Collagens | m | Abcam | ab88147 | https://www.abcam.com/products/primary-antibodies/collagen-i-antibody-3g3-bsa-and-azide-free-ab88147.html?productWallTab=ShowAll | Tris, pH9.0 | 1:500 | YES ‡ | NO | intestine, liver, lung | 25 | ||||||||||||
64 | Collagen, type I (pan) | - | Core Matrisome | Collagens | rb | Abcam | ab21286 | https://www.abcam.com/products/primary-antibodies/collagen-i-antibody-ab21286.html?productWallTab=ShowAll | Tris, pH9.0 | 1:2000 | NT | YES ‡ | intestine, liver, lung | 26 | ||||||||||||
65 | Collagen, type I (pan) | - | Core Matrisome | Collagens | rb | MilliporeSigma | AB765P | https://www.sigmaaldrich.com/US/en/product/mm/ab765p | Tris, pH9.0 | 1:100-1:250 | NO | YES - but weak | mouse intestine, lung | |||||||||||||
66 | Collagen, type IV (pan) | - | Core Matrisome | Collagens | rb | Abcam | ab6586 | https://www.abcam.com/products/primary-antibodies/collagen-iv-antibody-ab6586.html?productWallTab=ShowAll | Tris, pH9.0 + Pepsin | 1:2000-1:4000 | YES ‡ | YES ‡ | most tissues | 29, 30 | ||||||||||||
67 | Collagen, type VI (pan) | - | Core Matrisome | Collagens | rb | MilliporeSigma | AB7821 | https://www.sigmaaldrich.com/US/en/product/mm/ab7821 | Tris, pH9.0 | 1:2000-1:4000 | YES ‡ | YES ‡ | kidney, intestine, ovary | 31, 32 | ||||||||||||
68 | Endostatin (Collagen XVIII fragment) | - | Core Matrisome | Collagens | gt | R&D Systems | AF1098 | https://www.rndsystems.com/products/human-endostatin-antibody_af1098 | Tris, pH9.0 + Pepsin | 1:300-1:500 | YES ‡ | NT | CRC, endometrium | 48 | ||||||||||||
69 | Collagen, type XIII, α1 | COL13A1 | Core Matrisome | Collagens | rb | Novus Biologicals | NBP2-13854 | https://www.novusbio.com/products/collagen-xiii-alpha-1-antibody_nbp2-13854 | Tris, pH9.0 | 1:250 | YES ‡ | YES ‡ | mammary tissue, skin | 34, 35 | ||||||||||||
70 | Collagen, type I, α1 | COL1A1 | Core Matrisome | Collagens | sh | R&D Systems | AF6220 | https://www.rndsystems.com/products/human-pro-collagen-i-alpha1-antibody_af6220 | Tris, pH9.0 | 1:75 | YES ‡ | YES - but weak | endometrium, PDAC | 27 | ||||||||||||
71 | Collagen, type I, α1 | COL1A1 | Core Matrisome | Collagens | rb | Rockland Immunochemicals | 600-401-D19 | https://www.rockland.com/categories/primary-antibodies/collagen-i-alpha-1-propeptide-antibody-600-401-D19/ | Tris, pH9.0 + Pepsin | 1:250 | YES | NO | endometrium, PDAC | |||||||||||||
72 | Collagen, type XXII, α1 | COL22A1 | Core Matrisome | Collagens | rb | Abcam | ab121846 | https://www.abcam.com/products/primary-antibodies/col22a1-antibody-ab121846.html?productWallTab=ShowAll | Tris, pH9.0 | 1:200 | NO | YES ‡ | mouse muscle-tendon junction | 36 | ||||||||||||
73 | Collagen, type III, α1 | COL3A1 | Core Matrisome | Collagens | rb | Abcam | ab7778 | https://www.abcam.com/products/primary-antibodies/collagen-iii-antibody-ab7778.html?productWallTab=ShowAll | Tris, pH9.0 + Pepsin | 1:500-1:1000 | YES ‡ | NT | endometrium, skin | 28 | ||||||||||||
74 | Collagen, type VII, α1 | COL7A1 | Core Matrisome | Collagens | rb | Abcam | ab93350 | https://www.abcam.com/products/primary-antibodies/collagen-vii-antibody-bsa-and-azide-free-ab93350.html?productWallTab=ShowAll | Tris, pH9.0 + Pepsin | 1:250 | YES ‡ | NO | skin | 33 | ||||||||||||
75 | Heparan sulfate proteoglycan 2 (perlecan) | HSPG2 | Core Matrisome | Proteoglycans | rb | Boster | PB9277 | https://www.bosterbio.com/anti-hspg2-picoband-trade-antibody-pb9277-boster.html | Tris, pH9.0 | 1:500-1:750 | YES ‡ | YES ‡ | CRC, intestine, kidney | 73, 74 | ||||||||||||
76 | Versican | VCAN | Core Matrisome | Proteoglycans | rb | MilliporeSigma | AB1033 | https://www.sigmaaldrich.com/US/en/product/mm/ab1033 | Citric, pH6.0 | 1:250 | NO | YES ‡ | mouse cartilage, TEB | specific for mouse tissues | 152 | |||||||||||
77 | Chondroitin sulfate | - | Matrisome Associated | ECM-affiliated | m | Sigma-Aldrich | C8035 | https://www.sigmaaldrich.com/US/en/product/sigma/c8035 | Citric, pH6.0 | 1:1000 | YES ‡ | YES - but weak | placenta | 23 | ||||||||||||
78 | Annexin A5 | ANXA5 | Matrisome Associated | ECM-affiliated | rbM | Abcam | ab108321 | https://www.abcam.com/products/primary-antibodies/annexin-vanxa5-antibody-epr3979-ab108321.html?productWallTab=ShowAll | Tris, pH9.0 | 1:200-1:400 | YES ‡ | NO | colon, CRC | 12 | ||||||||||||
79 | Annexin A5 | ANXA5 | Matrisome Associated | ECM-affiliated | rb | Abcam | ab14196 | https://www.abcam.com/products/primary-antibodies/annexin-vanxa5-antibody-ab14196.html?productWallTab=ShowAll | Tris, pH9.0 | 1:1000 | YES | NT | colon, CRC | |||||||||||||
80 | Annexin A5 | ANXA5 | Matrisome Associated | ECM-affiliated | rb | Boster | PA1008 | https://www.bosterbio.com/anti-annexin-v-antibody-pa1008-boster.html | Tris, pH9.0 | 1:200 | YES | NT | colon, CRC | |||||||||||||
81 | Complement component C1qA | C1QA | Matrisome Associated | ECM-affiliated | rbM | Abcam | ab189922 | https://www.abcam.com/products/primary-antibodies/c1qa-antibody-epr14634-ab189922.html?productWallTab=ShowAll | Tris, pH9.0 | 1:200-1:400 | YES ‡ | NT | CRC, kidney | 37 | ||||||||||||
82 | C1q and TNF related protein 5 | C1QTNF5 | Matrisome Associated | ECM-affiliated | rb | Abcam | ab36893 | https://www.abcam.com/products/primary-antibodies/ctrp5-antibody-ab36893.html?productWallTab=ShowAll | Tris, pH9.0 | 1:1500 | YES ‡ | NT | colon, pancreas | 16 | ||||||||||||
83 | Chondroitin sulfate proteoglycan 4 (NG2) | CSPG4 | Matrisome Associated | ECM-affiliated | rb | MilliporeSigma | AB5320 | https://www.sigmaaldrich.com/US/en/product/mm/ab5320 | Tris, pH9.0 | 1:50-1:100 | YES ‡ | NT | CRC | 24 | ||||||||||||
84 | Endomucin | EMCN | Matrisome Associated | ECM-affiliated | rt | Invitrogen | 14-5851 | https://www.thermofisher.com/antibody/product/Endomucin-Antibody-clone-eBioV-7C7-V-7C7-Monoclonal/14-5851-82 | Tris, pH9.0 | 1:25 | YES - but weak ‡ | YES ‡ | kidney, lung | 46, 47 | ||||||||||||
85 | Glypican 1 | GPC1 | Matrisome Associated | ECM-affiliated | m | MilliporeSigma | MAB2600 | https://www.sigmaaldrich.com/US/en/product/mm/mab2600 | Tris, pH9.0 | 1:100 | YES ‡ | NO | CRC, PDAC | 69 | ||||||||||||
86 | Glypican 4 | GPC4 | Matrisome Associated | ECM-affiliated | rb | Abcam | ab118911 | https://www.abcam.com/products/primary-antibodies/glypican-4-antibody-ab118911.html?productWallTab=ShowAll | Tris, pH9.0 | 1:250 | YES ‡ | YES | kidney, pancreas | 70 | ||||||||||||
87 | Hemopexin | HPX | Matrisome Associated | ECM-affiliated | m | R&D Systems | MAB4490 | https://www.rndsystems.com/products/human-hemopexin-antibody-698813_mab4490 | Tris, pH9.0 | 1:1000-1:2000 | YES ‡ | NT | liver | 72 | ||||||||||||
88 | Hemopexin | HPX | Matrisome Associated | ECM-affiliated | rbM | Abcam | ab124935 | https://www.abcam.com/products/primary-antibodies/hemopexin-antibody-epr5610-ab124935.html?productWallTab=ShowAll | Tris, pH9.0 | 1:200-1:500 | YES | NT | liver | |||||||||||||
89 | Galectin 3 (Llectin, galactoside-binding, soluble, 3) | LGALS3 | Matrisome Associated | ECM-affiliated | gt | R&D Systems | AF1154 | https://www.rndsystems.com/products/human-galectin-3-antibody_af1154 | Tris, pH9.0 | 1:1250 | YES ‡ | NT | colon, endometrium | 96 | ||||||||||||
90 | Mucin 1 | MUC1 | Matrisome Associated | ECM-affiliated | rb | Abcam | ab15481 | https://www.abcam.com/products/primary-antibodies/muc1-antibody-ab15481.html?productWallTab=ShowAll | Tris, pH9.0 | 1:400 | YES ‡ | YES ‡ | lung | 110, 111 | ||||||||||||
91 | Mucin 2 | MUC2 | Matrisome Associated | ECM-affiliated | rb | Santa Cruz Biotechnology | sc-15334 | https://www.scbt.com/p/mucin-2-antibody-h-300?requestFrom=search | Citric, pH6.0 | 1:200 | YES ‡ | NO | colon | 112 | ||||||||||||
92 | Mucin 16 | MUC16 | Matrisome Associated | ECM-affiliated | rbM | Abcam | ab110640 | https://www.abcam.com/products/primary-antibodies/muc16-antibody-epr10202-ab110640.html?productWallTab=ShowAll | Tris, pH9.0 | 1:250-1:500 | YES ‡ | NT | endometrium | 114 | ||||||||||||
93 | Plexin A2 | PLXNA2 | Matrisome Associated | ECM-affiliated | rb | Abcam | ab39357 | https://www.abcam.com/products/primary-antibodies/plexin-a2-antibody-ab39357.html?productWallTab=ShowAll | Tris, pH9.0 | 1:200 | YES ‡ | YES ‡ | colon, kidney, PDAC | 118, 119 | ||||||||||||
94 | Syndecan 2 | SDC2 | Matrisome Associated | ECM-affiliated | rb | ABclonal | A1810 | https://abclonal.com/catalog-antibodies/SDC2RabbitpAb/A1810 | Tris, pH9.0 | 1:100 | YES - but weak | NT | liver, lung | |||||||||||||
95 | ADAM metallopeptidase 12 | ADAM12 | Matrisome Associated | ECM Regulators | rb | Proteintech | 14139-1-AP | https://www.ptglab.com/products/ADAM12-Antibody-14139-1-AP.htm | Tris, pH9.0 | 1:200 | YES ‡ | YES | CRC, mouse TEB | 2 | ||||||||||||
96 | ADAMTS metallopeptidase 17 | ADAMTS17 | Matrisome Associated | ECM Regulators | m | Novus Biologicals | H00170691-M01 | https://www.novusbio.com/products/adamts17-antibody-3b7_h00170691-m01 | Tris, pH9.0 | 1:3000 | YES ‡ | YES - but background stain | CRC, mouse TEB | 3 | ||||||||||||
97 | Thrombin (coagulation factor II) | F2 | Matrisome Associated | ECM Regulators | m | Abcam | ab17199 | https://www.abcam.com/products/primary-antibodies/thrombin-antibody-5g9-ab17199.html?productWallTab=ShowAll | Tris, pH9.0 | 1:100 | YES | NT | liver | |||||||||||||
98 | Lysyl oxidase-like 2 | LOXL2 | Matrisome Associated | ECM Regulators | rb | Abcam | ab140833 | https://www.abcam.com/products/primary-antibodies/loxl2-antibody-ab140833.html | Tris, pH9.0 | 1:200 | YES ‡ | YES ‡ | cartilage, ovarian cancer | the indivudual antibodies show varying staining pattern | 97, 98 | |||||||||||
99 | Lysyl oxidase-like 2 | LOXL2 | Matrisome Associated | ECM Regulators | rb | Abcam | ab96233 | https://www.abcam.com/products/primary-antibodies/loxl2-antibody-ab96233.html?productWallTab=ShowAll | Tris, pH9.0 | 1:250-1:500 | YES | NT | cartilage, ovarian cancer | the indivudual antibodies show varying staining pattern | ||||||||||||
100 | Lysyl oxidase-like 2 | LOXL2 | Matrisome Associated | ECM Regulators | rb | Novus Biologicals | NBP1-32954 | https://www.novusbio.com/products/lysyl-oxidase-homolog-2-loxl2-antibody_nbp1-32954 | Tris, pH9.0 | 1:250-1:500 | YES | NT | cartilage, ovarian cancer | the indivudual antibodies show varying staining pattern | ||||||||||||