ABCDEFGHIJKLMNOPQRSTUVWXYZAAAB
1
FilenameMonthNeuroLibre?False positive?LinkShared code?Shared data?Shared Scripts?Language(s)Additional notes"open source""open-source""opensource""open science""github""git""osf""jupyter""notebook""octave"
"available online"
"released""shared""code"
2
mrm.2019.81.0025.pdfJanuaryNOTRUETRUE
3
mrm.2019.81.0057.pdfJanuaryNOTRUETRUE
4
mrm.2019.81.0090.pdfJanuaryNOTRUETRUETRUE
5
mrm.2019.81.0116.pdfJanuaryMAYBEFALSE
https://github.com/VLOGroup/mri-variationalnetwork
TRUETRUEFALSEPython
Main repo from another paper, doesn't appear that the stuff for this paper has been uploaded yet.
TRUE
6
mrm.2019.81.0140.pdfJanuaryNOTRUETRUETRUE
7
mrm.2019.81.0220.pdfJanuaryNOTRUETRUE
8
mrm.2019.81.0247.pdfJanuaryNOTRUETRUE
9
mrm.2019.81.0362.pdfJanuaryMAYBEFALSE
https://github.com/mriphysics/verse-mb
TRUETRUETRUEMATLABOnly examplesTRUETRUE
10
mrm.2019.81.0377.pdfJanuaryNOTRUETRUE
11
mrm.2019.81.0439.pdfJanuaryNOTRUETRUETRUE
12
mrm.2019.81.0454.pdfJanuaryNOTRUETRUE
13
mrm.2019.81.0495.pdfJanuaryNOFALSETRUE
14
mrm.2019.81.0504.pdfJanuaryNOTRUETRUETRUE
15
mrm.2019.81.0524.pdfJanuaryNOFALSETRUE
16
mrm.2019.81.0602.pdfJanuaryNOTRUETRUE
17
mrm.2019.81.0645.pdfJanuaryNOTRUETRUE
18
mrm.2019.81.0781.pdfFebruaryNOTRUETRUE
19
mrm.2019.81.0811.pdfFebruaryNOFALSETRUE
20
mrm.2019.81.0839.pdfFebruaryNOTRUETRUE
21
mrm.2019.81.0881.pdfFebruaryMAYBEFALSE
https://github.com/IMTtugraz/BSReconFramework
PARTIALFALSEFALSEMATLAB
They only shared part of the code used for this project, from another publication
TRUETRUE
22
mrm.2019.81.0907.pdfFebruaryMAYBEFALSEhttps://github.com/mriphysicsNOT YETNOT YETNOT YETMATLAB, C++
Authors said in paper that code will be uploaded as MRTrix addon to their github org, but never did so as of today
TRUE
23
mrm.2019.81.0947.pdfFebruaryMAYBEFALSE
https://kclcvmimaging.wordpress.com/downloads/
NOT ANYMORENOT ANYMORENOT ANYMOREMATLAB
Private site, marked as private by authors. No longer accessible
TRUE
24
mrm.2019.81.0989.pdfFebruaryMAYBEFALSE
https://github.com/opennog/ODGD
PARTIALFALSEFALSEMATLAB
They only shared part of the code used for this project, from another publication
TRUETRUE
25
mrm.2019.81.1052.pdfFebruaryNOTRUETRUE
26
mrm.2019.81.1143.pdfFebruaryNOTRUETRUE
27
mrm.2019.81.1205.pdfFebruaryNOTRUETRUE
28
mrm.2019.81.1219.pdfFebruaryNOTRUETRUE
29
mrm.2019.81.1247.pdfFebruaryNOFALSETRUETRUE
30
mrm.2019.81.1296.pdfFebruaryNOTRUETRUE
31
mrm.2019.81.1307.pdfFebruaryMAYBEFALSE
https://github.com/rispoli-lab/Bilateral-Breast-Fusion-
TRUETRUETRUEMATLABOnly examples.TRUETRUETRUE
32
mrm.2019.81.1353.pdfFebruaryMAYBEFALSE
http://www.lpi.tel.uva.es/3dgrappa
TRUETRUETRUEMATLAB
Looks like they provide everything needed to reproduce.
TRUETRUE
33
mrm.2019.81.1412.pdfFebruaryNOTRUETRUE
34
mrm.2019.81.1434.pdfFebruaryNOTRUETRUE
35
mrm.2019.81.1486.pdfMarchNOTRUETRUE
36
mrm.2019.81.1595.pdfMarchNOTRUETRUE
37
mrm.2019.81.1620.pdfMarchNOTRUETRUE
38
mrm.2019.81.1634.pdfMarchNOTRUETRUE
39
mrm.2019.81.1685.pdfMarchNOTRUETRUE
40
mrm.2019.81.1699.pdfMarchNOTRUETRUE
41
mrm.2019.81.1739.pdfMarchMAYBEFALSE
https://github.com/maxdiefenbach/trabecular_bone_QSM
TRUETRUETRUEMATLAB, C++, C
Looks like they provide everything needed to reproduce.
TRUETRUETRUE
42
mrm.2019.81.1795.pdfMarchNOTRUETRUE
43
mrm.2019.81.1818.pdfMarchNOFALSETRUE
44
mrm.2019.81.1849.pdfMarchNOTRUETRUE
45
mrm.2019.81.1863.pdfMarchMAYBEFALSE
https://github.com/SeiberlichLab/Abdominal_MR_Phantom
TRUEFALSETRUEMATLAB
Only examples, but includes their simulated phantom in another repo.
TRUETRUE
46
mrm.2019.81.1890.pdfMarchNOTRUETRUE
47
mrm.2019.81.1898.pdfMarchLIKELYFALSE
https://github.com/mrirecon/RING
TRUETRUETRUESHELL, Python
Looks like it contains everything needed to reproduce all figures.
TRUETRUE
48
mrm.2019.81.1907.pdfMarchNOTRUETRUE
49
mrm.2019.81.1924.pdfMarchMAYBEFALSE
https://github.com/mylyu/SMS-EPI-Ghost-Correction
FALSEFALSEFALSEMATLAB
Authors promised to upload the code and data to their repo after publication, but never did.
TRUE
50
mrm.2019.81.2001.pdfMarchMAYBEFALSE
https://github.com/nicholas-zhu/HP_C13_project.git
TRUEFALSEFALSEMATLAB, CMATLAB, CTRUETRUE
51
mrm.2019.81.2011.pdfMarchNOTRUETRUE
52
mrm.2019.81.2025.pdfMarchMAYBEFALSE
http://www.mri-resource.kennedykrieger.org/software
TRUETRUEFALSEMATLABJust examplesTRUE
53
mrm.2019.81.2052.pdfMarchNOTRUETRUE
54
mrm.2019.81.2064.pdfMarchMAYBEFALSE
http://github.com/davidssmith/TRON
TRUETRUETRUEMATLAB, CudaJust examplesTRUETRUETRUE
55
mrm.2019.81.2072.pdfMarchMAYBEFALSE
https://github.com/IMTtugraz/PyQMRI
TRUETRUEFALSEPython, CJust examplesTRUETRUETRUETRUE
56
mrm.2019.81.2090.pdfMarchMAYBEFALSE
https://figshare.com/s/f2e47b41e974ab67039b
TRUETRUETRUEMIPAV plugin
Might contain all that's needed.
TRUETRUE
57
mrm.2019.81.2120.pdfMarchNOTRUETRUETRUE
58
mrm.2019.81.2135.pdfMarchMAYBEFALSE
http://www.imaging.robarts.ca/parraga/technology_codes.html
TRUEFALSEFALSEMATLAB, Cuda
Link is broken in paper, because it uses https. Remove the z and it'll work
TRUE
59
mrm.2019.81.2167.pdfMarchNOTRUETRUETRUE
60
mrm.2019.81.2209.pdf AprilMAYBEFALSE
http://innovation.columbia.edu/technologies/CU18146_optimized%E2%80%90magnetic%E2%80%90resonance
FALSEFALSEFALSEMATLAB
Link sends to a blank page.
TRUE
61
mrm.2019.81.2288.pdfAprilMAYBEFALSE
http://www.qbi-lab.org/software.php
FALSEFALSEFALSEMATLAB
Link send to their personal page, does not contain software. Other softwares are only available by emailing authors
TRUE
62
mrm.2019.81.2302.pdfAprilNOTRUETRUE
63
mrm.2019.81.2360.pdfAprilNOTRUETRUE
64
mrm.2019.81.2374.pdfAprilMAYBEFALSE
https://github.com/ygaogithub/DP-MS-Simulation
TRUEFALSETRUEMATLAB
Only simulation section of paper available.
TRUETRUE
65
mrm.2019.81.2385.pdfAprilMAYBEFALSE
https://github.com/poormanme/waterFatSeparated_MRThermometry
TRUEFALSETRUEMATLAB
Algorithm and example, no in vivo
TRUETRUE
66
mrm.2019.81.2412.pdf AprilMAYBEFALSEwww.cest-sources.orgTRUEFALSEFALSEMATLAB
Link doesn't make it explicit which software was used for this paper.
TRUETRUE
67
mrm.2019.81.2424.pdfAprilMAYBEFALSE
https://github.com/OSU-CMR-AP/ARTO_Example
TRUETRUETRUEMATLAB
Only example scripts/data
TRUE
68
mrm.2019.81.2439.pdfAprilNOTRUETRUE
69
mrm.2019.81.2474.pdfAprilNOTRUETRUE
70
mrm.2019.81.2536.pdfAprilNOTRUETRUE
71
mrm.2019.81.2576.pdfAprilMAYBEFALSE
https://github.com/srapacchi/SMSCINE
TRUETRUEFALSEMATLAB
Sample dataset, used Gadgetron.
TRUETRUE
72
mrm.2019.81.2588.pdfAprilNOFALSETRUE
73
mrm.2019.81.2632.pdf AprilNOFALSETRUETRUE
74
mrm.2019.81.2644.pdfAprilNOTRUETRUE
75
mrm.2019.81.2655.pdfAprilNOTRUETRUE
76
mrm.2019.81.2688.pdfAprilNOFALSETRUE
77
mrm.2019.81.2702.pdfAprilNOFALSETRUE
78
mrm.2019.81.2728.pdfAprilNOTRUETRUE
79
mrm.2019.81.2736.pdfAprilMAYBEFALSE
https://github.com/tarolangner/fcn_vatsat
TRUEFALSEFALSEPython
Trained model, but doesn't contain virtual environment or docker files, so will likely become stale.
TRUE
80
mrm.2019.81.2808.pdfAprilNOTRUETRUE
81
mrm.2019.81.2841.pdfMayMAYBEFALSE
https://www.cibm.ch/cms/lang/fr/pid/60486
FALSEFALSEFALSE MATLABBroken linkTRUE
82
mrm.2019.81.2869.pdfMayNOTRUETRUE
83
mrm.2019.81.2878.pdfMayLIKELYFALSE
https://github.com/martin3141/rats
TRUETRUETRUER
Script reproduces paper results
TRUETRUE
84
mrm.2019.81.2896.pdfMayNOTRUETRUE
85
mrm.2019.81.2972.pdfMayNOTRUETRUE
86
mrm.2019.81.2995.pdfMayNOTRUETRUE
87
mrm.2019.81.3007.pdfMayNOTRUETRUE
88
mrm.2019.81.3153.pdfMayNOTRUETRUE
89
mrm.2019.81.3192.pdfMayMAYBEFALSE
https://github.com/chongduan/HYTOM
TRUEFALSETRUEMATLAB
Simulation only, so reproduces simulation figures.
TRUETRUE
90
mrm.2019.81.3218.pdfMayNOTRUETRUE
91
mrm.2019.81.3234.pdfMayNOTRUETRUE
92
mrm.2019.81.3245.pdfMayNOTRUETRUE
93
mrm.2019.81.3283.pdfMayNOFALSETRUE
94
mrm.2019.81.3293.pdfMayMAYBEFALSE
https://github.com/GSDrenthen/Non-Negative-OMP/blob/master/NonNeg_OMP.m
TRUEFALSEFALSEMATLAB
Only a short algorithm file.
TRUE
95
mrm.2019.81.3314.pdfMayNOTRUETRUE
96
mrm.2019.81.3330.pdfMayNOFALSETRUETRUETRUE
97
mrm.2019.81.3379.pdfMayNOFALSETRUE
98
mrm.2019.81.3406.pdfMayNOTRUETRUE
99
mrm.2019.81.3427.pdfJuneNOTRUETRUE
100
mrm.2019.81.3488.pdfJuneNOTRUETRUE