Long_Format_Example4

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R	S	T	U	V	W
1	Research Data File					Experiment				Sample					Individual				Dataset
2	alias	lane	tech.replicate	format	title	description	type	sequencing instrument	name	bio. replicate	description	case or control	attribute	alias	sex	diagnosis_ids	has supporting file	title	type	data_access_policy	....	....	...
3	my_first_file.fastq.gz	4	1	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_15_01	1	Case sample for Patient_1 at 15days	Case	15days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
4	my_second_file.fastq.gz	4	2	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_15_01	1	Case sample for Patient_1 at 15days	Case	15days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
5	my_third_file.fastq.gz	5	1	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_15_02	1	Control sample for Patient_1 at 15days	Control	15days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
6	my_fourth_file.fastq.gz	5	2	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_15_02	1	Control sample for Patient_1 at 15days	Control	15days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
7	my_fifth_file.fastq.gz	2	1	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_30_01	2	Case sample for Patient_1 at 30days	Case	30days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
8	my_sixth_file.fastq.gz	2	2	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_30_01	2	Case sample for Patient_1 at 30days	Case	30days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
9	my_seventh_file.fastq.gz	6	1	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_30_02	2	Control sample for Patient_1 at 30days	Control	30days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
10	my_eitgth_file.fastq.gz	6	2	FASTQ	Exp_1	WGS performed on Illumina HiSeq X Ten	WGS	Illumina HiSeq X Ten	Sample_30_02	2	Control sample for Patient_1 at 30days	Control	30days	Patient_1	Male	ICD-10: C40	Patient_1_Phenopacket.json	Bone cancer WGS dataset	WGS	DKFZ_DAP
11
12
13	Processed Data File		Analysis		Dataset
14	alias	format	Input	Workflow title	title	type	data_access_policy
15	my_first_bam.bam.gz	BAM	my_first_file.fastq.gz	Alignment	Alignment results	WGS	DKFZ_DAP
16			my_second_file.fastq.gz	Alignment
17			my_third_file.fastq.gz	Alignment
18			my_fourth_file.fastq.gz	Alignment
19	my_second_bam.bam.gz	BAM	my_fifth_file.fastq.gz	Alignment	Alignment results	WGS	DKFZ_DAP
20			my_sixth_file.fastq.gz	Alignment
21			my_seventh_file.fastq.gz	Alignment
22			my_eitgth_file.fastq.gz	Alignment
23	my_first_VCF.vcf.gz	VCF	my_second_bam.bam.gz	Variant Calling	Variant calling result	Genomic variant calling	DKFZ_DAP
24			my_first_bam.bam.gz
25
26	Supplementary Data File			Dataset
27	alias	format	type	title	type	data_access_policy
28	Patient_1_Phenopacket.json	JSON	Phenopacket	Clinical data	Phenotype information	DKFZ_DAP
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100