A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | |
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1 | Talk title | Link to talk slides | |||||||||||||||||||||||
2 | A Single-Cell Spacial Omics Pipeline Leveraging Advancements by the IWC | https://docs.google.com/presentation/d/1lh9IziiLdt_zc0Jy37_LtcQFesGhpLhPQ8Gyw4Zfhf0/edit?usp=sharing | |||||||||||||||||||||||
3 | Accessing and Processing Sensitive Data in a Public Galaxy Server | Work in progress | |||||||||||||||||||||||
4 | Automated Reference Genome Assembly by Galaxy and the Vertebrate Genome Project | https://docs.google.com/presentation/d/1p2d0E7KD_Cw7ALG7HyD8TID9IDsFmx2hLc38dfzd9cQ/edit#slide=id.g25641046ce8_0_9 | |||||||||||||||||||||||
5 | Bringing Quantum into The Galaxy | https://docs.google.com/presentation/d/1vAa5J_JtqCEBlV8SzBrbqcUjarxjalIl/edit?usp=sharing&ouid=109951303624537546469&rtpof=true&sd=true | |||||||||||||||||||||||
6 | Collaborating with a core facility to build research scale workflows | https://docs.google.com/presentation/d/1xuQZh9oEqihUGY2Wm5crZwExA6zSjwX6xAPp7uIDx6w/edit#slide=id.p1 | |||||||||||||||||||||||
7 | Cost planning for genomic data analysis when leveraging commercial cloud resources | https://docs.google.com/presentation/d/1RkqaEXx43w2jyAFNre0-mN8i9UwcDpEPcRhfR36WBmM/edit?usp=sharing | |||||||||||||||||||||||
8 | Democratizing Galaxy Reference Data with the Intergalactic Data Commission | https://docs.google.com/presentation/d/1nA0seAcIQvBFny18-3aWhOEVoj3-U3R0IH2RwMTW-3Y/edit?usp=sharing | |||||||||||||||||||||||
9 | ELIXIR - the European Research Infrastructure for Life Science and its Communities | https://docs.google.com/presentation/d/1o39vXhrwDWbQFrVcsKuYTPh3ExGg0WBrvO0a0rAkjXU/edit#slide=id.g2583629561b_0_0 | |||||||||||||||||||||||
10 | Enabling Transformative Science Using Galaxy for Data Analysis at a Neutron Scattering Facility | https://docs.google.com/presentation/d/1ZHscUJ-a4_Q-U7AnhRkb-opDBL52CjDMYncQK6VSGWs/edit?usp=sharing | |||||||||||||||||||||||
11 | End the Wildcard Tyranny! Embrace Path-based Interactive Tools! | Work in progress | |||||||||||||||||||||||
12 | Enhancing Data Discovery via Text mining and Harmonization for Fair Data Analysis in Galaxy | https://docs.google.com/presentation/d/1ciOakJFX2ZY6hAhht14JjAsRzZJQWdES/edit?usp=sharing&ouid=116063774022604904044&rtpof=true&sd=true | |||||||||||||||||||||||
13 | Enhancing Remote Data Access in Galaxy with Unifying URL Handling and Filesource Capabilities | https://docs.google.com/presentation/d/1eEnkLjkQbsApvYktHWzwwfUCWFbaK2y3EvUxXbQ6uAk/edit?usp=sharing | |||||||||||||||||||||||
14 | Envisioning a new Galaxy User Interface | https://docs.google.com/presentation/d/1NxbeLvlxVQP4PBhNgLOr2RHYjlZUVuf70x4bZ59svbg/edit?usp=sharing | |||||||||||||||||||||||
15 | Exploring superoxide dismutase 1 gene polymorphism and possible links with Parkinson’s disease development | https://www.canva.com/design/DAFnXxQXfp8/_ehMcWsidrfRLqx3YSqxNA/view?utm_content=DAFnXxQXfp8&utm_campaign=designshare&utm_medium=link&utm_source=publishsharelink | |||||||||||||||||||||||
16 | FAIR Data Stewardship in Galaxy | https://docs.google.com/presentation/d/1nQp3sLTvqcndz2qSBzY9hnRCcNmMhAwY/edit?usp=sharing&ouid=118216869170164374825&rtpof=true&sd=true | |||||||||||||||||||||||
17 | From a new user to a training community contributor | https://docs.google.com/presentation/d/1QgAf_GMPazDaQwpSd2IG7-WSbhLgCqyQ0sOwLwiA6xU/edit?usp=sharing | |||||||||||||||||||||||
18 | Galaxy Australia - soliciting user feedback to improve user experience | https://docs.google.com/presentation/d/1OnNNcA7jsoh5tPyT19Pg-2gGyP9MxVIjsfA9l4K-roA/edit?usp=sharing | |||||||||||||||||||||||
19 | Galaxy Australia History Mailer | https://docs.google.com/presentation/d/1R5whyA1Nzkn8TguhgOkU3B74XOidsIiIVTFiFBXEbfM/edit#slide=id.g2579c838cbe_0_68 | |||||||||||||||||||||||
20 | Galaxy Climate Workbench: status and future plans | https://docs.google.com/presentation/d/1dix3XVzBYPseG7LZm-V00Bor2Mv0OGsavP74tHncXLE/edit?usp=sharing | |||||||||||||||||||||||
21 | Galaxy for the Earth system and biodiversity | https://docs.google.com/presentation/d/1XfWPTvXq7Ane1tWLIt1zrDwq-YMW7E8e1G0u-kBGZGE/edit?usp=sharing | |||||||||||||||||||||||
22 | Galaxy Genome Annotation: Galaxy as a platform for the annotation of genomes | https://docs.google.com/presentation/d/1qko2HMzZinmrz3RBV0uva9A0AeS_FFEOEOSYt521YnA/edit?usp=sharing | |||||||||||||||||||||||
23 | Galaxy Web Client Modernization: Embracing TypeScript, Auto-Generated API Bindings, and the Roadmap to Vue3 | WIP: https://docs.google.com/presentation/d/1pW6tZJL9BF9AHHgw30uYAyN9lRm3yoNrDb79OpkqbxM/edit?usp=sharing | |||||||||||||||||||||||
24 | Galaxy Workflow Manager: A Key Player for Reproducible Biomedical Research | https://docs.google.com/presentation/d/1GY6K9Ik20Gv9BtSEb6Oc1i2AOE4ffjkWSj7nYDGXxy0/edit?usp=sharing | |||||||||||||||||||||||
25 | Galaxy-E: Ecology oriented Galaxy initiative, a 2022-2023 update! | https://docs.google.com/presentation/d/1cVbC1xTkW4lhc7nX95t1OqsHMAFoYHZfUdfitpgX4TQ/edit?usp=sharing | |||||||||||||||||||||||
26 | Galaxy's data access layer + SQLAlchemy | https://docs.google.com/presentation/d/1odOvD_4zOY4sWSwQqsCGZBz7GzKWnkyZcQj7yxYvZto/edit?usp=sharing | |||||||||||||||||||||||
27 | Improving FASTQE for Galaxy | Improving FASTQE for Galaxy | |||||||||||||||||||||||
28 | Improving Galaxy provenance integration with RO-Crate | work in progress https://docs.google.com/presentation/d/13pw9LiBV3_pift-hMEoamf8KAv9ktHZFgj4lZXcEnu0/edit?usp=sharing | |||||||||||||||||||||||
29 | Instant data gathering across multiple histories | https://docs.google.com/presentation/d/1LKpFbQe5vrt7gc54-Pe1yJydbkvB94PtpvzH6Tgfcbc/edit?usp=sharing | |||||||||||||||||||||||
30 | Introducing a New Notification System in Galaxy | https://docs.google.com/presentation/d/1x8s0O1srpA-MULlPPEr93nIkjKlUh25mEPUN28_3aS8/edit?usp=sharing | |||||||||||||||||||||||
31 | Introducing the Galaxy single cell community of practice | https://docs.google.com/presentation/d/1Z4o6bKuu9xPoKgfJ73EyjT7SRU8bfEbco6gZEx-XyI8/edit?usp=sharing | |||||||||||||||||||||||
32 | Investigating the known and unknown microbial composition of metagenomic samples made easy with MetaSBT in Galaxy | https://docs.google.com/presentation/d/1cjp4qlm5AZhlQWZku1yV75KyynX7lOUbOO3WjOfqOfc/edit?usp=sharing | |||||||||||||||||||||||
33 | Let the analysis be GiN: Galaxy in Notebooks: An update. | https://docs.google.com/presentation/d/1wWc9ecoMAtjn0JUz7DUv2wvFGwr88YPN/edit#slide=id.p12 | |||||||||||||||||||||||
34 | Leveraging Complementary Systems for Galaxy: Tool Management and Performance | https://docs.google.com/presentation/d/1RvRIcqiYa2ddlrCfCiYyzy7PWXm-h4kf9DYrwP26dLs/edit#slide=id.g202725c0462_0_0 | |||||||||||||||||||||||
35 | Leveraging Galaxy and AnVIL to contribute to genomic data science education at under resourced institutions | Work in progress: https://docs.google.com/presentation/d/1WXI5YtOo-7m0jtngvaQZ-hEamH1LVpUcie2ItFG4TxE/edit?usp=sharing | |||||||||||||||||||||||
36 | Maximizing Workflow Efficiency with Galaxy's Job Cache Feature | https://docs.google.com/presentation/d/1sFVkZt-J7_3yQ5hBFmq2h_sdhsCNy0qjM-GhmF-QSEE/edit?usp=sharing | |||||||||||||||||||||||
37 | Migrating from Vuex to Pinia: Improving Performance and Simplifying State Management in Galaxy | https://docs.google.com/presentation/d/1LHgExKwNsk_IYeGqqO_jR9tC-GtQuYoZfLGGBfuPho8/edit?usp=sharing | |||||||||||||||||||||||
38 | New Features and Enhancements for Powerful and Flexible Workflow Execution | https://docs.google.com/presentation/d/1GY6K9Ik20Gv9BtSEb6Oc1i2AOE4ffjkWSj7nYDGXxy0/edit#slide=id.g2569f491643_1_158 | |||||||||||||||||||||||
39 | New Monocle3 tutorials for easy and flexible scRNA-seq trajectory analysis | https://docs.google.com/presentation/d/1zYHswapTxbLOrdxR6GUPvow6JVhocyYMKKq9vbNhsZ8/edit?usp=sharing | |||||||||||||||||||||||
40 | Powering Galaxy Australia into the Future –AARNet supporting large-scale, collaborative computational science | https://docs.google.com/presentation/d/1QvNRVh-RI7KeieMJI_oxa4CzIBTsnrelLOXPMyzSWsM/edit?usp=sharing | |||||||||||||||||||||||
41 | Reproducible and scalable annotation of fragmentation spectra using the matchms Galaxy tools ecosystem | https://docs.google.com/presentation/d/1O_q8uKyg1QNMsoYwNH_AFtaf77mB7tjh4Qne-zLvnVg/edit?usp=drivesdk | |||||||||||||||||||||||
42 | Revolutionizing Search in Galaxy: New Features for Improved Data and Tool Discovery | https://docs.google.com/presentation/d/1sqyDXcJyV1s2nmJyMHQsJHgkVxdiUdiZEGOQCEv4Oj4/edit#slide=id.p | |||||||||||||||||||||||
43 | Roadmap for safe sharing of generic data from discovery to broad data sharing: leveraging the power of Galaxy platform via Beacon and Privacy-Enhancing Technology (PET) | https://docs.google.com/presentation/d/12dIdzwwR81e6EX4VBDn5BLhzxUIFVpoR/edit?usp=sharing&ouid=116063774022604904044&rtpof=true&sd=true | |||||||||||||||||||||||
44 | Running Galaxy workflows on a large multi-cluster facility | https://docs.google.com/presentation/d/1lGZIrytLjsQiC4rTTDGJOz4nuuHEjIjaQkYVZQGoS2U/edit?usp=sharing | |||||||||||||||||||||||
45 | Sustaining a grant powered, community driven Galaxy | https://docs.google.com/presentation/d/1lYfRf4greIArHEja8jj9v0zijNPm3PPTq4G7URaxt9A/edit#slide=id.g25129b3afe3_0_131 | |||||||||||||||||||||||
46 | Towards meeting the needs of mass data researchers with AnVIL | https://docs.google.com/presentation/d/1HXIQguWpq8PREvpNI1TSbJKaxHHvNPaT6s0HYO3dF9w/edit?usp=sharing | |||||||||||||||||||||||
47 | Translating Galaxy Workflows to Nextflow with Janis | https://docs.google.com/presentation/d/1rKCE-DKkEn1JlHQK_AsuMA5SYT9PBo2dPJ-ty6USnpo/edit?usp=sharing | |||||||||||||||||||||||
48 | UX and Accessibility | https://docs.google.com/presentation/d/1Slb3GNuKEDffJD_GBnAc7qUoqhUZcXg2Ce7IGuS2A8c/edit?usp=sharing | |||||||||||||||||||||||
49 | Why Use Galaxy? Preliminary Results from a Scoping Review Comparing the Options for User-Friendly Bioinformatics | https://docs.google.com/presentation/d/1Jwa_BRootX6ed5cW1VMC9EdbC9Ul3v_xtHi3GoRsG0c/edit#slide=id.p | |||||||||||||||||||||||
50 | A process for monitoring tool health on Galaxy Australia | https://docs.google.com/presentation/d/1_z3IKNri67pcU5Yps4SJ8ZDYTgjJ0yXnKm1_j__licw/edit#slide=id.p10 | |||||||||||||||||||||||
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