GenoGSL-WEBintertek.allTable
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ABCDEFGHIJKLMNOPQRSTUVWXYZ
1
SNP PanelGene/QTLChrom.
Physical position (Mb)
SNP provider ID
TraitFavorable AlleleUnfavorable Allele
2
Panel 1BPH361.4snpOS0065Brown planthopperTC
3
Panel 1BPH361.8snpOS0067Brown planthopperAT
4
Panel 1DTY1.1138.5snpOS0071Drought toleranceAG
5
Panel 1DTY1.1138.9snpOS0074Drought toleranceGT
6
Panel 1DTY12.11215.3snpOS0091Drought toleranceTC
7
Panel 1DTY12.11217.6snpOS0095Drought toleranceAG
8
Panel 1DTY3.1330snpOS0085Drought toleranceGA
9
Panel 1DTY3.1331.3snpOS0089Drought toleranceCG
10
Panel 1RTSV1722.1snpOS0050Rice tungro spherical virusGTGCTATGTT
11
Panel 1Xa41127.6snpOS0052Bacterial leaf blightAC
12
Panel 2BADH2820.4snpOS0022FragranceTATATAAAAGATTATGGC
13
Panel 2BPH1744.6snpOS0068Brown planthopperFor reviewFor review
14
Panel 2Chalk553.3snpOS0024Grain chalkinessGA
15
Panel 2Pi-ta1210.6snpOS0006BlastCA
16
Panel 2Pi541125.3snpOS0015BlastTC
17
Panel 2Pi9610.38snpOS0007bBlast-CGATGGTTTC
18
Panel 2Submergence96.4snpOS0040SubmergenceTC
19
Panel 2xa13827.5snpOS0002Bacterial leaf blightGA
20
Panel 2Xa211121.3snpOS0061Bacterial leaf blightCG
21
Panel 2xa550.4snpOS0054Bacterial leaf blightAGTC
22
AdditionalBADH2820.38snpOS0031Fragrance-GAA
23
AdditionalBPH1748.7snpOS0019Brown planthopperFor reviewFor review
24
AdditionalBPH361.44snpOS0066Brown planthopperAG
25
AdditionalChalk553.3snpOS0026Grain chalkinessCG
26
AdditionalDTY1.1138.6snpOS0072Drought toleranceAG
27
AdditionalDTY1.1138.7snpOS0073Drought toleranceCT
28
AdditionalDTY12.11217.57snpOS0092Drought toleranceGC
29
AdditionalDTY12.11217.4snpOS0093Drought toleranceTG
30
AdditionalDTY12.11217.4snpOS0094Drought toleranceAG
31
AdditionalDTY12.11217.6snpOS0096Drought toleranceAC
32
AdditionalDTY2.129.6snpOS0075Drought toleranceCT
33
AdditionalDTY2.1210snpOS0076Drought toleranceCA
34
AdditionalDTY2.1210.1snpOS0077Drought toleranceAG
35
AdditionalDTY2.1210.2snpOS0078Drought toleranceAC
36
AdditionalDTY2.1210.7snpOS0079Drought toleranceAG
37
AdditionalDTY2.1211.2snpOS0080Drought toleranceTC
38
AdditionalDTY2.1212snpOS0081Drought toleranceCT
39
AdditionalDTY3.1330.7snpOS0086Drought toleranceTG
40
AdditionalDTY3.1331snpOS0087Drought toleranceCT
41
AdditionalDTY3.1331snpOS0088Drought toleranceAT
42
Additionalwx61.76snpOS0039Grain quality - Amylose ContentFor reviewFor review
43
AdditionalWaxy exon 661.76snpOS0037Grain quality - Amylose ContentFor reviewFor review
44
AdditionalWx-GBSS-ex1061.76snpOS0038Grain quality - Amylose ContentFor reviewFor review
45
AdditionalGS3316.7snpOS0033GrainSizeFor reviewFor review
46
AdditionalPi2610.38snpOS0009Blast-
TTCGAGCCGTTTCATCCCTAMTTGCRC
47
AdditionalPi541125.3snpOS0012BlastCA
48
AdditionalPi541125.3snpOS0014BlastGA
49
AdditionalPi9610.38snpOS0007aBlast-TGATGGTTTC
50
AdditionalPi9610.38snpOS0008BlastTG
51
AdditionalSSIIa66.75snpOS0036Grain qualityFor reviewFor review
52
AdditionalXa231123.4snpOS0048Bacterial leaf blightTC
53
AdditionalXa41127.02snpOS0051Bacterial leaf blightTG
54
AdditionalXa41127.6snpOS0053Bacterial leaf blightGA
55
AdditionalXa7627.6snpOS0004Bacterial leaf blightAC
56
AdditionalXa7628.1snpOS0005Bacterial leaf blightAG
57
AdditionalXa7627snpOS0055Bacterial leaf blightGA
58
AdditionalXa7628.1snpOS0057Bacterial leaf blightTG
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
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85
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87
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GenoGSL-WEBintertek.Table
GenoGSL-WEBintertek.Table-HIDDEN
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