Wheat IWGSP CSS stats

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R	S	T
1		No. Contigs	Cumulative Length	No. 'N's	Percent 'N's	No. genes	No. transcripts	tx per gene	LENGTH STATISTICS
2	Arm	No. Contigs	Cumulative Length	No. 'N's	Percent 'N's	No. genes	No. transcripts	tx per gene	Min.	1st Qu.	Median	Mean	3rd Qu.	Max.	n10	l10	n50	l50	n90	l90

3	1AL	197,674	249,963,486	134,955	0.05%	2855	8075	2.83	200	242	616	1,265	1,366	45,480	10,981	1,637	2,639	22,572	569	105,473
4	1AS	187,490	178,113,755	57,396	0.03%	1679	3656	2.18	200	230	304	950	946	42,080	9,093	1,424	2,242	19,131	269	108,918
5	1BL	198,968	299,439,079	215,372	0.07%	3006	8401	2.79	200	263	727	1,505	1,597	43,050	12,393	1,791	3,120	23,138	653	107,546
6	1BS	181,801	212,754,150	41,629	0.02%	1620	4240	2.62	200	229	304	1,170	1,094	48,440	14,314	1,112	3,287	14,846	302	91,360
7	1DL	292,785	254,359,011	31,327	0.01%	2706	7930	2.93	200	235	292	869	610	41,350	10,921	1,738	2,561	22,629	261	180,665
8	1DS	126,156	128,205,126	25,399	0.02%	1395	3770	2.70	200	229	290	1,016	890	37,630	12,655	739	2,850	10,270	271	69,993
9	2AL	321,517	328,194,942	70,827	0.02%	3646	9731	2.67	200	227	293	1,021	937	70,810	12,299	1,929	2,688	27,463	272	176,931
10	2AS	264,555	255,212,590	18,223	0.01%	2485	6572	2.64	200	231	332	965	874	49,740	11,837	1,568	2,398	22,922	279	153,118
11	2BL	365,563	404,464,437	69,100	0.02%	4153	10982	2.64	200	230	344	1,106	1,000	46,710	13,671	2,194	2,941	30,248	311	193,351
12	2BS	244,668	292,013,766	63,748	0.02%	2724	7298	2.68	200	227	289	1,194	1,047	58,760	15,322	1,434	3,711	18,372	294	119,592
13	2DL	508,239	261,619,365	19,662	0.01%	4286	9994	2.33	200	221	261	515	409	38,640	7,630	2,317	701	62,498	221	383,163
14	2DS	245,107	166,030,309	24,432	0.01%	2632	5964	2.27	200	227	293	677	571	44,180	9,218	1,285	1,241	24,796	237	168,177
15	3AL	303,844	247,216,137	26,960	0.01%	2949	7664	2.60	200	256	435	814	806	30,230	6,755	2,610	1,346	40,371	317	200,200
16	3AS	242,308	201,800,511	14,374	0.01%	2019	4878	2.42	200	254	438	833	840	25,270	6,947	2,069	1,404	32,097	317	157,715
17	3BX1	273,461	319,312,635	15,670	0.00%	3,228	8,949	2.77	200	266	496	1,168	1,080	47,950	12,128	3,890	2,655	53,263	403	311,112
18	3BX2	273,461	319,312,635	15,670	0.00%	3,228	8,949	2.77	200	266	496	1,168	1,080	47,950	12,128	3,890	2,655	53,263	403	311,112
19	3DL	326,758	186,457,895	25,454	0.01%	2785	8029	2.88	200	221	264	571	473	29,160	6,175	2,157	967	37,739	224	238,184
20	3DS	314,944	145,374,274	1,427	0.00%	2030	4151	2.04	200	231	286	462	432	19,560	3,175	3,097	515	60,478	226	246,262
21	4AL	362,010	355,934,257	70,146	0.02%	3454	8993	2.60	200	225	276	983	799	50,280	12,619	2,086	2,969	27,716	259	202,855
22	4AS	301,954	282,335,959	59,181	0.02%	1832	5349	2.92	200	225	275	935	757	70,060	13,343	1,538	2,782	22,511	254	174,983
23	4BL	317,294	248,664,471	62,774	0.03%	2797	7180	2.57	200	225	275	784	651	39,810	10,428	1,731	1,974	26,194	242	202,982
24	4BS	274,504	308,205,293	50,961	0.02%	2123	6394	3.01	200	228	294	1,123	922	61,950	16,367	1,391	3,463	19,321	287	141,637
25	4DL	454,216	254,434,292	3,202	0.00%	3109	7708	2.48	200	226	282	560	481	32,020	6,516	2,641	816	57,725	228	334,274
26	4DS	118,290	142,105,148	35,549	0.03%	1986	5428	2.73	200	232	336	1,201	1,132	57,880	13,795	766	3,278	10,061	334	59,330
27	5AL	403,265	318,135,065	40,510	0.01%	3316	9385	2.83	200	234	290	789	564	40,600	9,287	2,506	2,078	34,299	253	260,833
28	5AS	182,938	198,819,005	16,746	0.01%	1152	3303	2.87	200	235	306	1,087	837	48,780	14,866	991	3,509	13,069	289	98,573
29	5BL	436,173	415,170,143	65,170	0.02%	5091	13747	2.70	200	223	274	952	730	50,090	14,202	2,156	2,924	30,225	254	248,723
30	5BS	137,380	174,467,817	31,128	0.02%	1303	3707	2.84	200	234	339	1,270	1,308	44,900	12,943	1,020	3,315	12,645	366	66,488
31	5DL	223,456	236,791,573	57,806	0.02%	4087	11369	2.78	200	239	410	1,060	915	50,300	13,473	1,271	2,647	18,987	348	125,819
32	5DS	148,048	148,047,159	39,439	0.03%	1328	3856	2.90	200	231	309	1,000	971	45,040	11,400	936	2,353	14,096	278	83,549
33	6AL	245,867	214,378,543	33,309	0.02%	2390	6319	2.64	200	225	292	872	728	47,940	11,900	1,306	2,154	20,390	252	148,622
34	6AS	210,388	219,217,215	20,038	0.01%	2112	5436	2.57	200	230	338	1,042	948	46,510	12,800	1,246	2,669	17,962	291	115,609
35	6BL	251,706	257,411,872	25,457	0.01%	2269	6257	2.76	200	256	488	1,023	1,036	34,610	8,504	2,259	2,031	29,478	368	150,779
36	6BS	166,632	210,183,634	54,408	0.03%	1740	4868	2.80	200	373	652	1,261	1,329	35,450	9,119	1,711	2,366	21,566	500	101,439
37	6DL	203,805	199,800,717	10,676	0.01%	2637	7425	2.82	200	262	425	980	856	44,060	11,872	1,210	2,077	19,247	340	124,194
38	6DS	88,542	156,583,290	26,854	0.02%	1651	4596	2.78	200	356	764	1,768	1,742	53,210	16,086	722	4,297	8,877	706	46,891
39	7AL	233,306	252,444,836	104,936	0.04%	2281	6086	2.67	200	251	495	1,082	1,041	37,580	10,775	1,710	2,271	24,713	422	135,464
40	7AS	262,653	198,002,837	47,930	0.02%	2735	6499	2.38	200	231	309	754	682	32,260	8,522	1,647	1,470	27,464	250	172,771
41	7BL	328,725	259,605,653	60,937	0.02%	2611	6617	2.53	200	230	319	790	750	30,960	8,020	2,326	1,556	35,866	254	211,530
42	7BS	178,789	206,115,020	59,636	0.03%	1707	5003	2.93	200	249	537	1,153	1,145	50,940	11,071	1,360	2,428	19,074	438	100,714
43	7DL	161,061	222,868,133	132,977	0.06%	2727	7204	2.64	200	234	568	1,384	1,365	65,080	13,755	1,208	3,638	14,915	590	78,041
44	7DS	216,406	209,134,978	30,095	0.01%	2705	7047	2.61	200	246	451	966	911	32,780	9,102	1,704	1,967	23,408	354	131,087
45
46	Min	88,542	128,205,126	1,427	0.00%	1,152	3,303	2.04	200	221	261	462	409	19,560	3,175	722	515	8,877	221	46,891
47	Max	508,239	415,170,143	215,372	0.07%	5,091	13,747	3.01	200	373	764	1,768	1,742	70,810	16,367	3,890	4,297	62,498	706	383,163
48	Totals	10,776,707	10,138,701,012	2,011,490	0.02%	108,569	289,009									74,323		1,125,905		6,840,059
49	Averages	256,588	241,397,643	47,893	0.02%	2,585	6,881	2.67	200	243	382	1,002	920	44,526	11,153	1,770	2,404	26,807	333	162,859
50	SD	92,681	67,533,591	39,985	0.01%	870	2,327	0.21	0	31	132	259	297	11,262	2,933	733	864	13,606	117	78,324
51
52
53	Annotated by MIPS	86,710	634,419,438	124,156,531					200			7,317		70,808			11,402
54	As a perc.	0.80%	6.26%	6172.37%
55
56
57
58	3B	546,922	638,625,269	31,340		6456	17898
59
60
61
62
63
64
65				Combined length / Mbp	>537?
66	1AL	197,674	249,963,486
67	1AS	187,490	178,113,755	428	0
68	1BL	198,968	299,439,079
69	1BS	181,801	212,754,150	512	0
70	1DL	292,785	254,359,011
71	1DS	126,156	128,205,126	383	0
72	2AL	321,517	328,194,942
73	2AS	264,555	255,212,590	583	1
74	2BL	365,563	404,464,437
75	2BS	244,668	292,013,766	696	1
76	2DL	508,239	261,619,365
77	2DS	245,107	166,030,309	428	0
78	3AL	303,844	247,216,137
79	3AS	242,308	201,800,511	449	0
80	3BX1	273,461	319,312,635
81	3BX2	273,461	319,312,635	639	1
82	3DL	326,758	186,457,895
83	3DS	314,944	145,374,274	332	0
84	4AL	362,010	355,934,257
85	4AS	301,954	282,335,959	638	1
86	4BL	317,294	248,664,471
87	4BS	274,504	308,205,293	557	1
88	4DL	454,216	254,434,292
89	4DS	118,290	142,105,148	397	0
90	5AL	403,265	318,135,065
91	5AS	182,938	198,819,005	517	0
92	5BL	436,173	415,170,143
93	5BS	137,380	174,467,817	590	1
94	5DL	223,456	236,791,573
95	5DS	148,048	148,047,159	385	0
96	6AL	245,867	214,378,543
97	6AS	210,388	219,217,215	434	0
98	6BL	251,706	257,411,872
99	6BS	166,632	210,183,634	468	0
100	6DL	203,805	199,800,717