modENCODE.fly.metadata.qc

	A	B	C	D	E	F	H	I	L	M	N	O	Q	R	S	T	Y	Z	AA	AB	AC
1	IDX	RATING ( DO NOT USE -1s)	FILENAME PREFIX	TARGET TF FLYBASE GENE ID	TARGET TF CG ID	TARGET TF COMMON NAME	STAGE	STRAIN	IDR OPTIMAL PEAKS	RESCUE RATIO (Np / Nt)	POOLED CONS. IDR 5% (Np)	TRUE REP CONS. PEAKS IDR 5% (Nt)	PPR peak rank corr.	PPR IDR vs. peak rank corr.	REP peak rank corr.	REP IDR vs. peak rank corr.	PPR pval 1e-5 overlap	REP pval 1e-5 overlap	Combrep MACS2 pval 1e-5	Max Rep MACS2 pval 1e-5	COMMENT (This section is not complete). More comments to be added

2	2	1	5T-eve-GFP.3401_eve_Embryos-8-16-hr_UofC_stn	FBgn0000606	CG2328	eve	E8-16	5T-eve-GFP.3401	2498	1.202696196	2498	2077	0.676916	0.671441	0.585534	0.694825	5224	5593	5114	7872
3	3	1	7T-CAD.2626_Caudal_Embryos-0-4-hr_UofC_stn	FBgn0000251	CG1759	cad	E0-4	7T-CAD.2626	1537	3.469525959	1537	443	0.560283	0.625297	0.250255	0.479103	2119	1031	5356	6207
4	4	1	Hr46-GFP.TCF-nonISO1-0-8_TCF_E0-8_UofC_stn	FBgn0085432	CG34403	pan	E0-8	Hr46-GFP.TCF-nonISO1-0-8	538	1.390180879	538	387	0.289048	0.409516	0.244789	0.505812	547	498	1032	2935
5	5	1	Iso1.CG8478-WPP_CG8478_WPP_UofC_stn	FBgn0037746	CG8478	CG8478	WPP	Iso1.CG8478-WPP	2098	1.408053691	2098	1490	0.524316	0.658736	0.469976	0.638843	1865	1269	3775	2963
6	6	1	Iso1.CNC-AdultFemale_CNC_AdultFemale_UofC_stn	FBgn0262975	CG43286	cnc	AdultFemale	Iso1.CNC-AdultFemale	491	1.710801394	491	287	0.587336	0.599711	0.440168	0.37693	513	357	542	1839	Rep2 is worse
7	7	1	Iso1.CNC-AdultMale_CNC_AdultMale_UofC_stn	FBgn0262975	CG43286	cnc	AdultMale	Iso1.CNC-AdultMale	2860	1.09118657	2621	2860	0.548989	0.617871	0.533812	0.655589	2673	3217	3492	4807
8	8	1	Iso1.Fru-0-8_Fru_E0-8_UofC_stn	FBgn0004652	CG14307	fru	E0-8	Iso1.Fru-0-8	327	3.847058824	327	85	0.256965	0.379958	-0.009061	0.341578	870	669	1546	6519
9	9	1	Iso1.Gro-WPP_Gro_WPP_UofC_stn	FBgn0001139	CG8384	gro	WPP	Iso1.Gro-WPP	3510	1.277292576	3510	2748	0.620575	0.716883	0.531424	0.58563	4123	3301	4165	8811
10	10	1	Iso1.HP1-8-16_HP1_E8-16_UofC_stn	FBgn0030082	CG7041	HP1b	E8-16	Iso1.HP1-8-16	3628	2.834375	3628	1280	0.441848	0.542702	0.322723	0.553288	4858	3536	7103	11013
11	11	1	Iso1.Hth-0-8_Hth_E0-8_UofC_stn	FBgn0001235	CG17117	hth	E0-8	Iso1.Hth-0-8	2288	1.20994183	1891	2288	0.499256	0.671956	0.555866	0.661344	2080	2767	3096	4635
12	12	1	Iso1.Hth-8-16_Hth_E8-16_UofC_stn	FBgn0001235	CG17117	hth	E8-16	Iso1.Hth-8-16	1618	1.192336035	1618	1357	0.383479	0.534632	0.355254	0.419553	2310	1911	3333	8794
13	13	1	Iso1.Myc-W3L_Myc_W3L_UofC_stn	FBgn0262656	CG10798	dm	L3	Iso1.Myc-W3L	4462	1.265456608	4462	3526	0.765833	0.821748	0.671483	0.640371	3968	3777	4058	6075
14	14	1	Iso1.SuHw-16-24_SuHw_E16-24_UofC_stn	FBgn0003567	CG8573	su(Hw)	E16-24	Iso1.SuHw-16-24	3772	1.165276491	3772	3237	0.617694	0.581159	0.507667	0.685794	3583	3981	5006	5625
15	15	1	Iso1.SuHw-WPP_SuHw_WPP_UofC_stn	FBgn0003567	CG8573	su(Hw)	WPP	Iso1.SuHw-WPP	5353	1.020591039	5353	5245	0.589543	0.528133	0.548393	0.679437	4830	5148	5392	5785
16	16	1	Iso1.TCF-16-24_TCF_E16-24_UofC_stn	FBgn0085432	CG34403	pan	E16-24	Iso1.TCF-16-24	384	1.505882353	384	255	0.535371	0.585672	0.39482	0.562696	426	433	456	2774
17	17	1	Iso1.TCF-W3L_TCF_W3L_UofC_stn	FBgn0085432	CG34403	pan	L3	Iso1.TCF-W3L	536	1.13559322	536	472	0.788608	0.77977	0.722105	0.618471	534	609	540	1104
18	18	1	Iso1.TCF-WPP_TCF_WPP_UofC_stn	FBgn0085432	CG34403	pan	WPP	Iso1.TCF-WPP	905	1.064705882	905	850	0.804235	0.813322	0.65225	0.742428	832	866	1339	1707	Control dataset has very few reads
19	19	1	Iso1.Trl-8-16_Trl_E8-16_UofC_stn	FBgn0013263	CG33261	Trl	E8-16	Iso1.Trl-8-16	6363	1.174418605	6363	5418	0.70422	0.602719	0.396871	0.744803	5667	5763	7339	8331
20	21	1	Iso1.Yki-8-16_Yki_E8-16_UofC_stn	FBgn0034970	CG4005	yki	E8-16	Iso1.Yki-8-16	1976	4.31441048	1976	458	0.679487	0.709861	0.298893	0.590478	1654	1689	2630	4403
21	22	1	Notch-GFP.Notch-GFP-vMock-W3L_Notch_W3L_UofC_stn	FBgn0004647	CG3936	N	L3	Notch-GFP.Notch-GFP-vMock-W3L	2925	1.963087248	2925	1490	0.502576	0.60193	0.373378	0.524226	1935	1755	3775	4533
22	23	1	Notch-GFP.Notch-GFP-W3L_Notch_W3L_UofC_stn	FBgn0004647	CG3936	N	L3	Notch-GFP.Notch-GFP-W3L	2516	1.536019536	2516	1638	0.565531	0.677179	0.468811	0.549887	2059	1817	3344	4308
23	24	1	S2-DRSC.2638_CTCF_Late-Embryonic-stage_UofC_stn	FBgn0035769	CG8591	CTCF	EL	S2-DRSC.2638	2932	1.099774944	2932	2666	0.776688	0.777441	0.737692	0.698696	3637	3586	5844	5172
24	25	1	S2-DRSC.2639_CTCF_Late-Embryonic-stage_UofC_stn	FBgn0035769	CG8591	CTCF	EL	S2-DRSC.2639	2447	1.265907915	1933	2447	0.833233	0.810086	0.911174	0.836986	2237	2722	3266	3174
25	26	1	S2.CG8478-S2_CG8478_S2_UofC_stn	FBgn0037746	CG8478	CG8478	S2	S2.CG8478-S2	1343	1.401878914	958	1343	0.505877	0.64399	0.556799	0.614062	1022	1201	1347	2936
26	27	1	strain.3232_Sin3A_Embryos-0-12-hr_UofC_stn	FBgn0022764	CG8815	Sin3A	E0-12	strain.3232	3014	1.062015504	3014	2838	0.900479	0.89557	0.893104	0.879955	3665	3699	3801	4289
27	28	1	strain.3234_tll_Embryos-0-4-hr_UofC_stn	FBgn0003720	CG1378	tll	E0-4	strain.3234	1152	1.268722467	1152	908	0.394892	0.565089	0.313367	0.438865	2236	2154	6232	6991
28	29	1	strain.3238_GAF_Embryos-16-24-hr_UofC_stn	FBgn0013263	CG33261	Trl	E16-24	strain.3238	6047	1.569426421	6047	3853	0.956744	0.933142	0.850865	0.877564	6380	4772	8428	8327	Control dataset has very few reads
29	30	1	strain.3240_CG8478_Embryos-8-16-hr_UofC_stn	FBgn0037746	CG8478	CG8478	E8-16	strain.3240	1274	1.723951286	1274	739	0.261223	0.48022	0.388875	0.536249	2017	1284	9225	20079
30	31	1	strain.3242_Huckebein_Embryos-8-16-hr_UofC_stn	FBgn0261434	CG9768	hkb	E8-16	strain.3242	196	1.647058824	196	119	0.759267	0.612848	0.647587	0.585621	336	268	266	883
31	32	1	strain.3243_KNI_Embryos-8-16-hr_UofC_stn	FBgn0001320	CG4717	kni	E8-16	strain.3243	805	1.646216769	805	489	0.738168	0.789656	0.549682	0.659955	879	709	1602	2172
32	33	1	strain.3390_Hr39_Embryos-16-24-hr_UofC_stn	FBgn0261239	CG8676	Hr39	E16-24	strain.3390	1262	2.394686907	1262	527	0.568048	0.702528	0.471597	0.711522	1219	1334	2803	2841
33	34	1	strain.3391_HP1_Embryos-16-24-hr_UofC_stn	FBgn0030082	CG7041	HP1b	E16-24	strain.3391	2403	3.24291498	2403	741	0.763139	0.777359	0.425122	0.224458	3069	2597	4449	4305
34	35	1	strain.3392_HP1_Embryos-16-24-hr_UofC_stn	FBgn0030082	CG7041	HP1b	E16-24	strain.3392	2095	2.216931217	2095	945	0.703825	0.795071	0.468668	0.706173	2649	3381	4533	7600
35	36	1	strain.3393_bonus_Embryos-16-24-hr_UofC_stn	FBgn0023097	CG5206	bon	E16-24	strain.3393	904	1.054842474	904	857	0.527036	0.606722	0.496874	0.617053	1924	2068	3981	5837
36	37	1	strain.3394_Kruppel_Embryos-16-24-hr_UofC_stn	FBgn0001325	CG3340	Kr	E16-24	strain.3394	472	1.344729345	472	351	0.604406	0.723662	0.499945	0.533659	460	374	1010	1402
37	38	1	strain.3395_Dichaete_Embryos-0-8-hr_UofC_stn	FBgn0000411	CG5893	D	E0-8	strain.3395	357	2.514084507	357	142	0.233001	0.282909	0.145719	0.546711	437	370	2260	3548
38	39	1	strain.3396_SuVar3-9_Embryos-0-12-hr_UofC_stn	FBgn0263755	CG43664	Su(var)3-9	E0-12	strain.3396	3090	1.15470852	3090	2676	0.644752	0.765133	0.624179	0.717815	6021	6072	7535	10341
39	40	1	strain.3399_trem_Adult-Female_UofC_stn	FBgn0038767	CG4413	trem	Adult-Female	strain.3399	1286	1.39630836	1286	921	0.819835	0.773411	0.674174	0.514995	2131	1545	1992	3753
40	41	1	Y-cn-bw-sp.2627_HDAC4a_Embryos-0-12-hr_UofC_stn	FBgn0041210	CG1770	HDAC4a	E0-12	Y-cn-bw-sp.2627	1805	1.115574784	1618	1805	0.695554	0.702541	0.737152	0.722391	2092	2428	3856	4063
41	43	1	Y-cn-bw-sp.2629_HDAC11_Embryos-0-12-hr_UofC_stn	FBgn0051119	CG31119	HDAC11	E0-12	Y-cn-bw-sp.2629	2044	1.150900901	1776	2044	0.7692	0.770189	0.831636	0.819792	2769	3376	3206	4868
42	44	1	Y-cn-bw-sp.2630_HDAC11_Embryos-0-12-hr_UofC_stn	FBgn0051119	CG31119	HDAC11	E0-12	Y-cn-bw-sp.2630	979	3.098101266	316	979	0.266162	0.457031	0.456727	0.446647	1661	2907	4529	6572
43	45	1	Y-cn-bw-sp.2633_HDAC3_Embryos-0-12-hr_UofC_stn	FBgn0025825	CG2128	HDAC3	E0-12	Y-cn-bw-sp.2633	5988	1.269181857	4718	5988	0.773264	0.813493	0.849457	0.821722	5358	5845	7431	6466
44	46	1	Y-cn-bw-sp.2634_HDAC3_Embryos-0-12-hr_UofC_stn	FBgn0025825	CG2128	HDAC3	E0-12	Y-cn-bw-sp.2634	6566	1.183916336	5546	6566	0.82967	0.840853	0.895016	0.829219	5522	5944	7007	6346
45	47	1	Y-cn-bw-sp.2636_HDAC1_Embryos-0-12-hr_UofC_stn	FBgn0015805	CG7471	HDAC1	E0-12	Y-cn-bw-sp.2636	4412	1.05524994	4181	4412	0.733083	0.78573	0.737038	0.797046	5747	6562	8988	8792
46	48	0	10T-DFD-GFP.3229_dfd_Embryos-16-24-hr_UofC_stn	FBgn0000439	CG2189	Dfd	E16-24	10T-DFD-GFP.3229	404	2.74829932	404	147	0.001992	0.185092	-0.10366	-0.334995	287	206	1881	1982	Potential mislabeling, Rep1 undersequenced
47	1	0	10T-DFD-GFP.3230_dfd_Larvae-L3-stage_UofC_stn	FBgn0000439	CG2189	Dfd	L3	10T-DFD-GFP.3230	651	1.056818182	616	651	0.28898	0.439917	-0.141381	-0.566655	2754	2263	7006	4909	Rep2 undersequenced
48	49	0	7T-CAD.3403_Caudal_Larvae-L3-stage_UofC_stn	FBgn0000251	CG1759	cad	L3	7T-CAD.3403	587	1.875399361	587	313	0.550295	0.680062	0.46298	0.424703	675	511	1706	2692	Rep1 and Rep3 very weak
49	50	0	AbdB-GFP.AbdB-GFP-vMock-W3L_AbdB_W3L_UofC_stn	FBgn0000015	CG11648	Abd-B	L3	AbdB-GFP.AbdB-GFP-vMock-W3L	526	1.429347826	526	368	0.293398	0.47979	0.216495	0.507339	506	575	1721	6214
50	51	0	AbdB-GFP.AbdB-GFP-W3L_AbdB_W3L_UofC_stn	FBgn0000015	CG11648	Abd-B	L3	AbdB-GFP.AbdB-GFP-W3L	737	4.521472393	737	163	0.505397	0.615386	0.311064	0.559546	897	866	1079	6428
51	52	0	Dfd-GFP.Dfd-GFP-0-8_Dfd_E0-8_UofC_stn	FBgn0000439	CG2189	Dfd	E0-8	Dfd-GFP.Dfd-GFP-0-8	940	1.405082212	940	669	0.696135	0.714572	0.536022	0.610888	880	797	1043	2245
52	53	0	EcR-GFP.2641_EcR_pupae-WPP-10-11-hr_UofC_stn	FBgn0000546	CG1765	EcR	pupae-WPP-10-11-hr	EcR-GFP.2641	649	1.046774194	649	620	0.395989	0.602881	0.42855	0.590777	790	850	2101	2472
53	54	0	EcR-GFP.2642_EcR_WPP-30-33-hr_UofC_stn	FBgn0000546	CG1765	EcR	WPP-30-33-hr	EcR-GFP.2642	1090	3.562091503	1090	306	0.559215	0.634101	0.296536	0.385497	1446	571	3170	6196	Rep2 and 3 are terrible
54	55	0	Eip74-GFP.Eip74-GFP-8-16_Eip74_E8-16_UofC_stn	FBgn0000567	CG32180	Eip74EF	E8-16	Eip74-GFP.Eip74-GFP-8-16	754	1.086455331	694	754	0.531122	0.60337	0.585334	0.713562	582	749	827	1655
55	56	0	Exd-GFP.Cmi-0-8_Cmi_E0-8_UofC_stn	FBgn0263667	CG5591	Lpt	E0-8	Exd-GFP.Cmi-0-8	1685	5.542763158	1685	304	0.352182	0.446469	0.098475	-0.098476	1172	484	3136	5218	Rep1 is bad
56	57	0	Exd-GFP.TBP-0-8_TBP_E0-8_UofC_stn	FBgn0003687	CG9874	Tbp	E0-8	Exd-GFP.TBP-0-8	5030	1.593284764	5030	3157	0.585459	0.695982	0.462207	0.448818	4568	3712	6648	7643
57	58	0	Hr78-GFP.Hr78-GFP-8-16_Hr78_E8-16_UofC_stn	FBgn0015239	CG7199	Hr78	E8-16	Hr78-GFP.Hr78-GFP-8-16	731	4.038674033	731	181	0.463898	0.6227	0.118089	-0.101196	562	234	1189	2099
58	59	0	Hr78-GFP.Hr78-GFP-W3L_Hr78_W3L_UofC_stn	FBgn0015239	CG7199	Hr78	L3	Hr78-GFP.Hr78-GFP-W3L	1288	3.037735849	1288	424	0.442927	0.544445	0.262065	0.422244	1167	405	1751	7106
59	60	0	Iso1.br-core-0-8_br-core_E0-8_UofC_stn	FBgn0000210	CG11491	br	E0-8	Iso1.br-core-0-8	381	1.265780731	301	381	0.256717	0.429697	0.284079	0.423581	883	1069	1037	3335
60	61	0	Iso1.CG16778-0-8_CG16778_E0-8_UofC_stn	FBgn0003715	CG16778	CG16778	E0-8	Iso1.CG16778-0-8	150	1.071428571	150	140	0.21762	0.281627	0.241097	0.425285	280	197	356	1473
61	63	0	Iso1.CNC-16-24_CNC_E16-24_UofC_stn	FBgn0262975	CG43286	cnc	E16-24	Iso1.CNC-16-24	691	6.339449541	691	109	0.419815	0.553577	0.133087	0.271787	650	140	588	4171	Rep2 is bad
62	64	0	Iso1.CNC-WPP_CNC_WPP_UofC_stn	FBgn0262975	CG43286	cnc	WPP	Iso1.CNC-WPP	147	1.176	147	125	0.458519	0.443815	0.374035	0.3863	136	122	157	868
63	65	0	Iso1.Dll-WPP_Dll_WPP_UofC_stn	FBgn0000157	CG3629	Dll	WPP	Iso1.Dll-WPP	2994	1.023239918	2994	2926	0.604114	0.665405	0.608553	0.674754	2181	2570	2538	4243
64	68	0	Iso1.H-0-8_H_E0-8_UofC_stn	FBgn0001168	CG6494	h	E0-8	Iso1.H-0-8	1782	4.013513514	444	1782	0.14918	0.333188	-0.054833	-0.18822	1517	1853	6799	6155
65	69	0	Iso1.modMDG4-W3L_modMDG4_W3L_UofC_stn	FBgn0002781	CG32491	mod(mdg4)	L3	Iso1.modMDG4-W3L	235	1.450617284	235	162	0.512673	0.390335	0.447568	0.399454	225	233	254	1000
66	70	0	Iso1.Prd-RF12-0-12_Prd_E0-12_UofC_stn	FBgn0003145	CG6716	prd	E0-12	Iso1.Prd-RF12-0-12	353	1.011461318	353	349	0.560578	0.457141	0.542277	0.429364	404	300	406	819
67	71	0	Iso1.Prd-RF13-0-12_Prd_E0-12_UofC_stn	FBgn0003145	CG6716	prd	E0-12	Iso1.Prd-RF13-0-12	132	1.885714286	132	70	0.472427	0.362022	0.258375	0.27973	119	137	128	1211
68	72	0	Iso1.psq-Kc_psq_Kc167_UofC_stn	FBgn0263102	CG2368	psq	Kc167	Iso1.psq-Kc	446	1.581560284	446	282	0.552083	0.514055	0.444074	0.421212	479	309	475	1099
69	73	0	Iso1.psq-WPP_psq_WPP_UofC_stn	FBgn0263102	CG2368	psq	WPP	Iso1.psq-WPP	1003	71.64285714	1003	14	0.364651	0.44614	0.071981	0.333658	740	478	1851	3938
70	74	0	Iso1.sc-0-12_sc_E0-12_UofC_stn	FBgn0004170	CG3827	sc	E0-12	Iso1.sc-0-12	201	2.421686747	83	201	0.173404	0.408212	0.043308	0.132953	295	330	376	1965
71	75	0	Iso1.sc-0-8_sc_E0-8_UofC_stn	FBgn0004170	CG3827	sc	E0-8	Iso1.sc-0-8	143	1.254385965	114	143	0.159605	0.19389	0.18949	0.227693	113	203	209	949
72	76	0	Iso1.Sin3A-Kc_Sin3A_Kc167_UofC_stn	FBgn0022764	CG8815	Sin3A	Kc167	Iso1.Sin3A-Kc	594	1.140115163	594	521	0.396222	0.178043	0.28803	-0.082698	653	654	572	1522
73	79	0	Iso1.Stat92E-WPP_Stat92E_WPP_UofC_stn	FBgn0016917	CG4257	Stat92E	WPP	Iso1.Stat92E-WPP	295	2.153284672	295	137	0.074705	0.424459	0.213657	0.452398	139	98	570	600
74	80	0	Iso1.SuH-0-8_SuH_E0-8_UofC_stn	FBgn0004837	CG3497	Su(H)	E0-8	Iso1.SuH-0-8	127	1.076271186	118	127	0.259123	0.291952	-0.337865	0.171055	188	754	211	14451
75	81	0	Iso1.SuH-16-24_SuH_E16-24_UofC_stn	FBgn0004837	CG3497	Su(H)	E16-24	Iso1.SuH-16-24	240	1.11627907	240	215	0.32844	0.379672	0.133535	0.293415	574	370	480	3592
76	82	0	Iso1.SuH-8-16_SuH_E8-16_UofC_stn	FBgn0004837	CG3497	Su(H)	E8-16	Iso1.SuH-8-16	48	1.714285714	48	28	0.382543	0.171436	0.354675	0.3809	37	22	63	155
77	83	0	Iso1.TCF-0-8_TCF_E0-8_UofC_stn	FBgn0085432	CG34403	pan	E0-8	Iso1.TCF-0-8	1476	2.267281106	1476	651	0.517372	0.574319	0.327351	0.394736	1931	531	1905	9287
78	84	0	Iso1.Ttk-Kc_Ttk_Kc167_UofC_stn	FBgn0003870	CG1856	ttk	Kc167	Iso1.Ttk-Kc	4309	1.828947368	2356	4309	0.488748	0.588727	0.565839	0.658887	4639	4822	4474	7085
79	20	0	Iso1.Usp-W3L_Usp_W3L_UofC_stn	FBgn0003964	CG4380	usp	L3	Iso1.Usp-W3L	443	1.299120235	443	341	0.185419	0.191045	-0.345544	-0.418884	1091	930	2545	6758
80	85	0	Kc167.H-Kc_H_Kc167_UofC_stn	FBgn0001168	CG6494	h	Kc167	Kc167.H-Kc	216	1.393548387	155	216	0.530425	0.402088	0.140539	0.474217	67	135	70	641
81	86	0	Kc167.insv-Kc_insv_Kc167_UofC_stn	FBgn0031434	CG3227	insv	Kc167	Kc167.insv-Kc	218	1.141361257	191	218	0.418249	0.298944	0.205049	0.361616	132	579	174	5437
82	87	0	Kc167.Myc-Kc167_Myc_Kc167_UofC_stn	FBgn0262656	CG10798	dm	Kc167	Kc167.Myc-Kc167	100	1.408450704	100	71	0.43357	0.431443	0.388574	0.493826	100	101	206	579
83	88	0	Kc167.SuH-Kc_SuH_Kc167_UofC_stn	FBgn0004837	CG3497	Su(H)	Kc167	Kc167.SuH-Kc	2018	2.590500642	779	2018	0.75787	0.418756	0.769608	0.765844	900	1623	924	2345
84	90	0	LolaI-GFP.LolaI-GFP-W3L_LolaI_W3L_UofC_stn	FBgn0005630	CG12052	lola	L3	LolaI-GFP.LolaI-GFP-W3L	330	2.171052632	152	330	0.078658	0.064427	0.243857	0.145566	465	468	331	2768
85	91	0	LolaJ-GFP.LolaJ-GFP-0-12_LolaJ_E0-12_UofC_stn	FBgn0005630	CG12052	lola	E0-12	LolaJ-GFP.LolaJ-GFP-0-12	296	1.072463768	296	276	0.267096	0.318758	0.300391	0.36711	566	612	1369	1811
86	92	0	LolaJ-GFP.LolaJ-GFP-12-24_LolaJ_E12-24_UofC_stn	FBgn0005630	CG12052	lola	E12-24	LolaJ-GFP.LolaJ-GFP-12-24	814	2.060759494	814	395	0.521439	0.635966	0.380296	0.499562	723	434	1023	2229
87	93	0	R13-YFP.3400_eve_Embryos-1-6-hr_UofC_stn	FBgn0000606	CG2328	eve	E1-6	R13-YFP.3400	160	1.415929204	160	113	0.091426	0.231197	0.003931	0.362862	187	175	1417	1289
88	95	0	Stat92E-GFP.Stat92E-GFP-0-12_Stat92E_E0-12_UofC_stn	FBgn0016917	CG4257	Stat92E	E0-12	Stat92E-GFP.Stat92E-GFP-0-12	206	1.138121547	206	181	0.39773	0.189853	-0.141801	-0.128885	182	164	151	1361
89	96	0	Stat92E-GFP.Stat92E-GFP-12-24_Stat92E_E12-24_UofC_stn	FBgn0016917	CG4257	Stat92E	E12-24	Stat92E-GFP.Stat92E-GFP-12-24	164	2.246575342	164	73	0.326634	0.253608	0.157748	0.117496	188	176	175	1690
90	100	0	strain.3237_PCL_Embryos-0-8-hr_UofC_stn	FBgn0003044	CG5109	Pcl	E0-8	strain.3237	1226	1.207881773	1015	1226	0.001316	-0.637297	0.208636	0.334024	1747	1676	10097	9181	Rep2 is dead and Rep1 and 3 are reasonably different
91	101	0	strain.3239_eve_Embryos-1-6-hr_UofC_stn	FBgn0000606	CG2328	eve	E1-6	strain.3239	354	1.089230769	354	325	0.344652	0.540042	0.30072	0.444179	481	481	1902	3077
92	104	0	USP-GFP.USP-GFP-0-12_USP_E0-12_UofC_stn	FBgn0003964	CG4380	usp	E0-12	USP-GFP.USP-GFP-0-12	499	2.053497942	499	243	0.225494	0.41384	0.269619	0.165381	401	315	1529	1541	Rep1 is very poor
93	105	0	USP-GFP.USP-GFP-WPP12_USP_WPP12_UofC_stn	FBgn0003964	CG4380	usp	WPP12	USP-GFP.USP-GFP-WPP12	362	1.152866242	314	362	0.163701	0.130186	0.344733	0.305221	581	765	1069	3008
94	106	-1	7T-CAD.3231_Caudal_Adult-Female-3-days_UofC_stn	FBgn0000251	CG1759	cad	Adult-Female-3-days	7T-CAD.3231	6731	26.924	6731	250	0.760144	0.820119	0.107654	-0.11805	8078	66	11502	11044	mislabeled
95	107	-1	EcR-GFP.2640_EcR_Larvae-L3-stage_UofC_stn	FBgn0000546	CG1765	EcR	L3	EcR-GFP.2640	636	2.051612903	636	310	0.543559	0.637469	0.46298	0.406718	662	511	1706	2692
96	108	-1	Exd-GFP.Bcd-0-8_Bcd_E0-8_UofC_stn	FBgn0000166	CG1034	bcd	E0-8	Exd-GFP.Bcd-0-8	313	1.242063492	313	252	0.273946	0.349035	0.246774	0.298109	109	143	369	1347	Too few peaks for Bcd
97	109	-1	Foxo-GFP.Foxo-GFP-0-8_Foxo_E0-8_UofC_stn	FBgn0038197	CG3143	foxo	E0-8	Foxo-GFP.Foxo-GFP-0-8	245	1.065217391	245	230	0.113316	0.150322	0.09283	0.197049	59	43	141	1046	Rep2 is dead
98	110	-1	Foxo-GFP.Foxo-GFP-8-16_Foxo_E8-16_UofC_stn	FBgn0038197	CG3143	foxo	E8-16	Foxo-GFP.Foxo-GFP-8-16	188	1.861386139	188	101	0.308295	0.398679	0.063226	0.067412	215	175	216	1380
99	111	-1	Hnf4-GFP.Hnf4-GFP-0-8_Hnf4_E0-8_UofC_stn	FBgn0004914	CG9310	Hnf4	E0-8	Hnf4-GFP.Hnf4-GFP-0-8	2940	1.025462156	2867	2940	0.029137	0.083378	0.079174	0.068736	231	229	1099	2803
100	112	-1	Hnf4-GFP.Hnf4-GFP-8-16_Hnf4_E8-16_UofC_stn	FBgn0004914	CG9310	Hnf4	E8-16	Hnf4-GFP.Hnf4-GFP-8-16	33	2.75	33	12	0.178636	0.36545	-0.059507	-0.016159	47	23	24	44