A Course on the Creative Scientific Process
Adapted from: Itai Yanai & Martin Lercher
Itai Yanai
Professor of Biochemistry at New York University, School of Medicine
Undergraduate degrees in Engineering and Philosophy of Science
PhD in Bioinformatics, Boston University
Postdoctoral fellow at the Weizmann (Israel) and Harvard
Expertise:
Professor of Computational Cell Biology at Heinrich Heine University Düsseldorf �(Institute for Computer Science & Department of Biology)
Undergraduate degree in Physics
PhD in Theoretical Physics, Cambridge University
Postdoctoral fellow at the University of Bath and EMBL Heidelberg
Expertise:
Martin Lercher
Podcast & Editorials
How does science work?
Karl Popper and falsification
“Science in the works has two aspects: what could be called day science and night science”
François Jacob (1920-2013), discoverer of
principles of gene regulation
“Science in the works has two aspects: what could be called day science and night science”
“Night science wanders blind. It hesitates, stumbles, recoils, sweats, wakes with a start. Doubting everything, it is forever trying to find itself, question itself, pull itself back together. Night science is a sort of workshop of the possible where what will become the building material of science is worked out.”
François Jacob (1920-2013), discoverer of
principles of gene regulation
The actual scientific method: �periods of day science & night science
Night science is the creative part of science!
The day/night distinction is shared with the arts
Music:
Art:
Night Music Day Music
Night Art Day Art
Lady Gaga
Frida Kahlo
Improvisational science
“The fun is always on the other side of a ‘yes’ ”
Martin De Matt
(improvisational theatre instructor)
Taking a walk with a friend has always been a crucial part of the scientific method
Rule #1: You need someone you can talk to
The benefits of discussing with a colleague:
From Beveridge’s ‘The Art of Scientific Investigation’
Traditional brainstorming is not ideal
Brainstorming by asking a group of people to suggest ideas on a given problem:
Group Pressure and Conformity
Alone: <1% made the mistake
In Groups: wrong 33% of the time
What is the ideal group size?
Nature, 2019
Rule #2: Discussions are better when they are one-on-one
Pairs: Working in pairs seems to be ideal.
A person gets attached to their idea.
It’s much more fun to work with another person.
Rule #3: Think of the discussion as an improvisation
Adopt a mindset where you are open to new ideas.
The ‘Yes, and’ rule of scientific improvisation
Rule #4: Make the other person look good
Rule #5: It’s not just all talk
Improvisational conversations are all around us and yet they may be the hidden part of the scientific method.
The two languages of science
“If we allow ourselves the license of talking about genes as if they had conscious aims, always reassuring ourselves that we could translate our sloppy language back into respectable terms if we wanted to, we can ask the question, what is a single selfish gene trying to do?”
Richard Dawkins, The Selfish Gene
“The Selfish Gene” by Richard Dawkins (1976)
“We are all survival machines – robot vehicles blindly programmed to preserve the selfish molecules known as genes”
Anthropomorphisms are a special type of metaphor
Our brains are wired to adopt the ‘intentional stance’
Spunt et al. J Cogn Neurosci. (2015)
The language of day science
Day science language is used in:
Day science starts with a hypothesis that must be expressed in precise, metaphor-free language.
Day science then sets up conclusive experiments with the appropriate controls, and uses statistical methods to assess our confidence in the results
The language of night science
Translating between �night science language and day science language
“If we allow ourselves the license of talking about genes as if they had conscious aims, always reassuring ourselves that we could translate our sloppy language back into respectable terms if we wanted to, we can ask the question, what is a single selfish gene trying to do?”
Richard Dawkins, The Selfish Gene
Night science language can be rephrased in the language of day science.
Night science language:
Translated into respectable Day science language:
Translating night science language into respectable day science language
The language of discovery
Lost in translation
What is�the question?
We have a false sense of the structure of knowledge:
Is our knowledge like a brick wall with some knowledge gaps to be filled in?
A discovery is unexpected and may not fit neatly into our wall
Rephrased questions that led to scientific breakthroughs
The scientific method:
The perceived (day science) & hidden (night science) view:
“I’m very confused” a student would tell Uri, to which he would reply,
“Oh good - So you’re in the cloud!”
Uri Alon. How to choose a good scientific problem. Mol Cell. 2009
The perceived (day science) and hidden (night science) view of the scientific method:
“Is the scientific paper a fraud?”
“I mean that the scientific paper may be a fraud because it misrepresents the processes of thought that accompanied or gave rise to the work that is described in the paper.
That is the question and I will say right away that my answer to it is 'yes'. The scientific paper in its orthodox form does embody a totally mistaken conception, even a travesty, of the nature of scientific thought.”
Peter Medawar
“Father of transplantation"
Scientific advances…
Scientific advances…
The Data-Hypothesis Conversation
“ ‘When someone seeks,’ said Siddhartha, ‘then it easily happens that his eyes see only the thing that he seeks, and he is able to find nothing, to take in nothing. [...] Seeking means: having a goal. But finding means: being free, being open, having no goal.’ ”
Hermann Hesse
Night science is an attitude!
“Not all who wander �are lost”
Exploration requires a deep understanding of a field
Different backgrounds explain why different researchers discover different things in a dataset.
The same data can lead to different conclusions.
Ellen Rothenberg on ‘inhabiting the data’
How do you come up with a new idea?
“I think most of it is inhabiting the data. [...] I know that everybody knows the story about Albert Einstein, imagining himself being a photon. But in a sense, when we look at data sets, that's what we should be doing. Even if we're looking at molecular biology data. If you are this transcription factor in the cell's nucleus: How the hell do you figure out which of the million possible genomic sites you're going to go to in this particular cellular context? [..]
�This really helps you identify what I think are really major outstanding problems in one's field.”
Ellen Rothenberg
CalTech
Patternicity, or “just a correlation”?
Identifying patterns
Testing �for causality
Beware: Scientists are biased!
Image: The Upturned Microscope
Interdisciplinarity & Renaissance minds
Modern science is heavily structured
Our discipline decides:
The quintessential Renaissance mind:
Leonardo da Vinci
(scientist, artist, philosopher, writer, inventor)
Isaac Newton’s work transcends any one field
Fields and subfields are just one way of clustering knowledge.
There are no real boundaries between fields.
Many scientists were originally trained in a different field.
(In an interdisciplinary project, someone will make the connection.)
Francis Crick
Marie Curie
Training:
Contributed to:
Physics
Physics & Chemistry
Physics
Biology
Does increased interdisciplinarity really lead to more insights?
There are contradictory results from bibliometric approaches:
Different forms of interdisciplinarity:
Those who engage in interdisciplinary research tend to be less productive than the experts.
Expert’s dilemma: Finding balance between disciplinary day science expertise and interdisciplinary night science creativity.
Importing an idea from another field
Exporting an idea to another field
How can we increase our thinking across disciplines?
Expert by day, Renaissance mind by night
Also, go to an art museum and ask yourself which painting is like your project.
SUMMARY
Day Science Night Science
Mode: | Falsification | Improvisational |
Goal: | Hypothesis-testing | Hypothesis-generating |
Compartmentalization: | Disciplinary | Interdisciplinary |
Language: | Precise | Metaphorical |
Logic: | Consistent Answers | Questions from Contradictions |
Puzzle-state: | Solution-testing | Puzzle-switching |
Podcast & Editorials