Genomics

By: Anvith Kakkera and Anurag Perakalapudi

Data Collection

1. Collect bodily fluid(ie: blood)

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• Conduct genomic sequencing(high-throughput)

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• Sequence Alignment(rechecking with other sequences and fixing)

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• Variant Calling Algorithm(find difference with reference genome)

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History of DNA Sequencing

ML?

2023

Data Mining on DNA

Uses of DNA Sequencing

• Helps diagnose genetic diseases
• Can help detect future conditions
• Identifying Criminals from Forensic Evidence

Ways to Use ML

Clustering Algorithms

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Prediction Algorithms

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Genomics in Evolution

Genomics in Diseases

Possible Implementations

• RNA Sequence and Tumors
• Predicting Faces from DNA

Tumor Type Detection

Machine Learning Model

Read and Clean Data

Display of Data

PCA and Neural Networks

Decision Trees

Decision Tree Training and Testing Set Accuracy

Testing Set Accuracy

Sources

• https://www.frontiersin.org/articles/10.3389/fbioe.2020.01032/full
• https://www.genomicseducation.hee.nhs.uk/education/core-concepts/what-is-bioinformatics/
• https://www.mdpi.com/2073-4425/14/1/136#:~:text=Face%20character%20prediction%20has%20been,of%20a%20person%20from%20DNA.