Welcome !

Hans-Rudolf Hotz (FMI, Basel)

hrh@fmi.ch

hrhotz@googlemail.com

@hrhotz

Welcome !

twitter: #EGD2022 #usegalaxy

@galaxyproject @ELIXIREurope

https://tinyurl.com/EGD20221

Code of Conduct

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https://galaxyproject.org/community/coc/

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https://elixir-europe.org/events/code-of-conduct

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a Big Thank You to:

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Anika Erxleben

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Beatriz Serrano-Solano

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Oana Marchis

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...and many more from the Freiburg Galaxy team

a Big Thank You to:

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a Big Thank You to:

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This is the fifth/sixth time we meet....

This is the fifth/sixth time we meet....

This is the fifth/sixth time we meet....

This is the fifth/sixth time we meet....

This is the fifth/sixth time we meet....

This is the fifth/sixth time we meet....

European Galaxy Days 2020 - Paris

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This is the fifth/sixth time we meet....

European Galaxy Days 2020 - Paris

(ELIXIR webinar series - March 2021)

twitter: #EGD2022 #usegalaxy

@galaxyproject @ELIXIREurope

3 events in one

Number of Participants

Number of Participants

countries

Familiarity with Galaxy

I don't know Galaxy

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I have used Galaxy (usegalaxy.org, usegalaxy.eu, etc.)

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I have taught Galaxy

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I have developed tools for Galaxy

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I have contributed to the Galaxy code base

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I am a Galaxy admin

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other

What is Galaxy ?

Data Intensive Science for Everyone

Galaxy is an open, web-based platform for accessible,

reproducible, and transparent computational biomedical

research.

• Accessible: Users without programming experience can easily specify parameters and run tools and workflows.
• Reproducible: Galaxy captures information so that any user can repeat and understand a complete computational analysis.
• Transparent: Users share and publish analyses via the web and create Pages, interactive, web-based documents that describe a complete analysis.

Galaxy is

• more than 17 years of development:

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• a huge community

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• more than just a web server:

Galaxy is

• more than 17 years of development:

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• a huge community

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• more than just a web server:

Regional Communities

Communities of practice

Galaxy Community

Proposed Galaxy governance and planning structure

https://galaxyproject.org/community/governance/

Galaxy is

• more than 17 years of development:

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• a huge community

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• is successful

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245,556 registered user on

usegalaxy.org

245,556 registered user on

usegalaxy.org

245,556 registered user on

usegalaxy.org

245,556 registered user on

usegalaxy.org

and all the other public and private Galaxy servers

Galaxy is

• more than 17 years of development:

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• a huge community

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• is successful

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• more than just a web server

Today's Schedule

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10:30 - 11:00 Coffee Break

12:30 - 14:00 Lunch Break

15:00 - 15:30 Coffee Break

17:30 ...going to the Pub

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see also:

https://galaxyproject.org/events/2022-10-egd/egd/

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Today's Schedule

​

10:30 - 11:00 Coffee Break

12:30 - 14:00 Lunch Break

15:00 - 15:30 Coffee Break

17:30 ...going to the Pub

​

see also:

https://galaxyproject.org/events/2022-10-egd/egd/

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Today's Schedule

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10:50 - 11:20 Coffee Break

12:20 - 13:30 Lunch Break

15:10 - 15:40 Coffee Break

17:00 ...going to the Pub

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see also:

https://galaxyproject.org/events/2022-10-egd/egd/

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Wednesday's Schedule

Wednesday afternoon: Birds of a Feather (aka "demo")

14:00 - 15:00 Birds of a Feather (Part 1)

15:30 - 17:00 Birds of a Feather (Part 2)

https://tinyurl.com/EGD2022BoF

Global Hub office hours (Nick Stoler)

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small-scale admins gathering (Martin Wolstencroft)

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microGalaxy (Bérénice Batut)

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pyGenomeTracks (Lucille Delisle)

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Making use of interactive tools to prototype and share research tools and methodology (Sveinung G.)

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Phage Galaxy with Apollo for genomics instruction (Jason Gill)

Thursday/Friday

ESG Kick off

EGD code/hack fest

Björn Grüning (Albert-Ludwigs-Universität, Freiburg)

gruening@informatik.uni-freiburg.de

@bjoerngruening

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Impact? How does it matter?

Why do we keep doing what we are doing?

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Training Events

• Smorgasbord 2: Tapas
• 3000+ registrations, global
• asynchronous, 24/7
• 100+ instructors from community
• will be back in 2023 (content welcome!)�
• Many other community-led events using GTN materials

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• Get funding for the European Galaxy family
• National Galaxy servers, Pulsar Network, Meta-Scheduler, FAIR data integration
• 3 new communities in the grant
• Material science
• Biodiversity, climate, BioGenEU
• Astrophysics
• EOSC 4 CANCER
• EOSC - FAIR-EASE

Main objective:

The overall objective of the EuroScienceGateway is to achieve our shared vision of an open collaborative digital space for European scientists.

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ESG in a Nutshell

Project Acronym: ESG

Project Full Name: EuroScienceGateway

Duration: 3 years

Starting Date: 1st September 2022

End Date: 31st August 2025

# Beneficiaries: 14

Associated partners: 2

Affiliated partners: 1

Coordinator (Organisation, Full name): Albert LUdwig Universität Freiburg, Björn Grüning

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Contributing to the development of the European infrastructure. Enabling scientists everywhere to connect.

Beneficiaries:

EGI

CNR

CNRS

INFN

VIB

UP

BSC

UiO

UB

CESNET

TUBITAK

AGH

IISAS

15 | 09 | 2022 by EOSC-A and EOSC Focus

52

The sustainability question!

Modernization Process

#14687

#14660

#14660

#14687

Data produced by running: `find . -type f | wc -l` and `find . -type f | xargs wc -l` on the `components`, `mvc` and `template/webapps/galaxy` directories. Changes replace structural makos loading Vue app and mock Masthead.

#4993

#706

Modernization Timeline

ADMIN TOOL INSTALL

HISTORY

FORMS

WORKFLOW EDITOR

APP CORE

2014 2015 2016 2017 2018 2019 2020 2021 2022

ADMIN PANEL

UPLOADER

TOOL BACKEND

LOGIN BACKEND

TOOL PANELS

FORMS

LOGIN FRONTEND

GRIDS

PREFERENCES

APP CORE

TOOLSHED REMOVAL

VISUALIZATIONS

BACKEND

VUE

BACKBONE

PAGE EDITOR