1 of 161

Introduction to CHAOS

Larry Liebovitch, Ph.D.

Florida Atlantic University

2004

2 of 161

These two sets of data have the same

  • mean
  • variance
  • power spectrum

3 of 161

4 of 161

Data 1

RANDOM

random

x(n) = RND

5 of 161

CHAOS

Deterministic

x(n+1) = 3.95 x(n) [1-x(n)]

Data 2

6 of 161

etc.

7 of 161

8 of 161

Data 1

RANDOM

random

x(n) = RND

9 of 161

Data 2

CHAOS

deterministic

x(n+1) = 3.95 x(n) [1-x(n)]

x(n+1)

x(n)

10 of 161

Definition

CHAOS

Deterministic

predict that value

these values

11 of 161

CHAOS

Small Number of Variables

x(n+1) = f(x(n), x(n-1), x(n-2))

Definition

12 of 161

Definition

CHAOS

Complex Output

13 of 161

Properties

CHAOS

Phase Space is Low Dimensional

phase space

d , random

d = 1, chaos

14 of 161

Properties

CHAOS

Sensitivity to Initial Conditions

nearly identical

initial values

very different

final values

15 of 161

Properties

CHAOS

Bifurcations

small change

in a parameter

one pattern

another pattern

16 of 161

Time Series

X(t)

Y(t)

Z(t)

embedding

17 of 161

Phase Space

X(t)

Z(t)

phase

space set

Y(t)

18 of 161

Attractors in Phase Space

Logistic Equation

X(n+1)

X(n)

X(n+1) = 3.95 X(n) [1-X(n)]

19 of 161

Attractors in Phase Space

Lorenz Equations

X(t)

Z(t)

Y(t)

20 of 161

X(n+1)

X(n)

Logistic Equation

phase space

time series

d<1

The number of independent variables = smallest integer >

the fractal dimension of the attractor

d < 1, therefore, the equation of the time series that produced this attractor depends on 1 independent variable.

21 of 161

Lorenz Equations

phase space

time series

d =2.03

The number of independent variables = smallest integer >

the fractal dimension of the attractor

d = 2.03, therefore, the equation of the time series that produced this attractor depends on 3 independent variables.

X(t)

Z(t)

Y(t)

X(n+1)

n

22 of 161

Data 1

time series

phase space

d

Since ,

the time series

was produced

by a random

mechanism.

d

23 of 161

Data 2

time series

phase space

d = 1

Since d = 1,

the time series

was produced by

a deterministic

mechanism.

24 of 161

Constructed by direct measurement:

Phase Space

Each point in the phase space set has coordinates

X(t), Y(t), Z(t)

Measure X(t), Y(t), Z(t)

Z(t)

X(t)

Y(t)

25 of 161

Constructed from one variable

Phase Space

Takens’ Theorem

Takens 1981 In Dynamical Systems

and Turbulence Ed. Rand & Young,

Springer-Verlag, pp. 366 - 381

X(t+ t)

X(t+2 t)

X(t)

Each point in the

phase space set

has coordinates

X(t), X(t + t), X(t+2 t)

26 of 161

velocity (cm/sec)

Position and Velocity of the Surface of a Hair Cell in the Inner Ear

Teich et al. 1989 Acta Otolaryngol (Stockh), Suppl. 467 ;265 - 279

10-1

-10-1

-10-4

3 x 10-5

displacement (cm)

stimulus = 171 Hz

27 of 161

velocity (cm/sec)

Position and Velocity of the Surface of a Hair Cell in the Inner Ear

Teich et al. 1989 Acta Otolaryngol (Stockh), Suppl. 467 ;265 - 279

5 x 10-6

displacement (cm)

stimulus = 610 Hz

-3 x 10-2

3 x 10-2

-2 x 10-5

28 of 161

Data 1

RANDOM

​

x(n) = RND

fractal demension of the phase space set

fractal dimension

of phase space set

embedding dimension = number of values of the data taken at a time to produce the phase space set

29 of 161

Data 2

CHAOS

deterministic

x(n+1) = 3.95 x(n) [1 - x(n)]

fractal dimension

of phase space set

fractal demension of the phase space set = 1

embedding dimension = number of values of the data taken at a time to produce the phase space set

30 of 161

microelectrode

chick heart cell

current

source

voltmeter

Chick Heart Cells

v

Glass, Guevara, Bélair & Shrier.

1984 Phys. Rev. A29:1348 - 1357

31 of 161

Spontaneous Beating,

No External Stlimulation

Chick Heart Cells

voltage

time

32 of 161

Periodically Stimulated

2 stimulations - 1 beat

Chick Heart Cells

2:1

33 of 161

Chick Heart Cells

1:1

Periodically Stimulated

1 stimulation - 1 beat

34 of 161

Chick Heart Cells

2:3

Periodically Stimulated

2 stimulations - 3 beats

35 of 161

periodic stimulation - chaotic response

The Pattern of Beating

of Chick Heart Cells

Glass, Guevara, Bélair & Shrier.1984 Phys. Rev. A29:1348 - 1357

36 of 161

= phase of the beat with respect to the stimulus

The Pattern of Beating of Chick Heart Cells continued

phase vs. previous phase

0.5

0

0.5

1.0

1.0

0

0.5

1.0

i + 1

experiment

i

theory (circle map)

37 of 161

The Pattern of Beating

of Chick Heart Cells

Glass, Guevara, Belair & Shrier.1984 Phys. Rev. A29:1348 - 1357

Since the phase space set is

1-dimensional, the timing

between the beats of these

cells can be described by a

deterministic relationship.

38 of 161

Procedure

  • Time series

e.g. voltage as a function of time

​

  • Turn the Time Series into a Geometric Object

This is called embedding.

39 of 161

Procedure

  • Determine the Topological Properties of this Object

Especially, the fractal dimension.

​

  • High Fractal Dimension

= Random = chance

Low Fractal Dimension

= Chaos = deterministic

40 of 161

The Fractal Dimension �is NOT equal to �The Fractal Dimension

41 of 161

Fractal Dimension:�How many new pieces of the Time Series are found when viewed at finer time resolution.

X

time

d

42 of 161

Fractal Dimension:�The Dimension of the Attractor in �Phase Space is related to the�Number of Independent Variables.

X

time

d

x(t)

x(t+ t)

x(t+2 t)

43 of 161

Mechanism that Generated the Data

Chance

d(phase space set)

Determinism

d(phase space set)

= low

Data

x(t)

t

?

44 of 161

Lorenz�1963 J. Atmos. Sci. 20:13-141

C O L D

Model

HOT

(Rayleigh, Saltzman)

45 of 161

Lorenz�1963 J. Atmos. Sci. 20:13-141

Equations

46 of 161

Lorenz�1963 J. Atmos. Sci. 20:13-141

X = speed of the convective circulation X > 0 clockwise, X < 0 counterclockwise

Y = temperature difference between rising and falling fluid

Equations

47 of 161

Lorenz�1963 J. Atmos. Sci. 20:13-141

Z = bottom to top temperature minus the linear gradient

Equations

48 of 161

Lorenz�1963 J. Atmos. Sci. 20:13-141

Phase Space

Z

X

Y

49 of 161

Lorenz Attractor

X < 0

X > 0

cylinder of air rotating counter-clockwise

cylinder of air rotating clockwise

50 of 161

Sensitivity to Initial Conditions�Lorenz Equations

IXtop(t) - Xbottom(t)I e t

= Liapunov Exponent

X(t)

X= 1.00001

Initial Condition:

different

same

X(t)

X= 1.

0

0

51 of 161

Deterministic, Non-Chaotic

X(n+1) = f {X(n)}

Accuracy of values

computed for X(n):

1.736 2.345 3.254

5.455 4.876 4.234

3.212

52 of 161

Deterministic, Chaotic

X(n+1) = f {X(n)}

Accuracy of values

computed for X(n):

3.455 3.45? 3.4??

3.??? ? ? ?

53 of 161

Initial Conditions� X(t0), Y(t0), Z(t0)...

Clockwork Universe

determimistic non-chaotic

Can

compute

all future

X(t), Y(t), Z(t)...

Equations

54 of 161

Initial Conditions� X(t0), Y(t0), Z(t0)...

Chaotic Universe

determimistic chaotic

sensitivity

to initial

conditions

Can not

compute

all future

X(t), Y(t), Z(t)...

Equations

55 of 161

Lorenz Strange Attractor

Trajectories from outside:

pulled TOWARDS it

why its called an attractor

starting away:

56 of 161

Lorenz Strange Attractor

Trajectories on the attractor:

pushed APART from each other

sensitivity to initial conditions

starting on:

57 of 161

“Strange”�attractor is fractal

phase space set

not strange

strange

58 of 161

“Chaotic”�sensitivity to initial conditions

time series

not chaotic

chaotic

X(t)

t

X(t)

t

59 of 161

Shadowing Theorem

If the errors at each integration step are small, there is an EXACT trajectory which lies within a small distance of the errorfull trajectory that we calculated

60 of 161

Shadowing Theorem

There is an INFINITE number of trajectories on the attractor. When we go off the attractor, we are sucked back down exponentially fast. We’re on an exact trajectory, just not on the one we thought we were on.

61 of 161

4. We are on a “real” trajectory.

3. Pulled back

towards the attractor.

2. Error pushes

us off

the attractor.

1. We start here.

Trajectory

that we actually

compute.

Trajectory that we are trying to compute.

62 of 161

Sensitivity to initial conditions means that the conditions of an experiment can be quite similar, but that the results can be quite different.

63 of 161

+

TUESDAY

10 µl

ArT

64 of 161

+

10 µl

WEDNESDAY

ArT

65 of 161

A = 3.22

X(n)

n

X(n + 1) = A X(n) [1 -X (n)]

66 of 161

A = 3.42

X(n)

n

X(n + 1) = A X(n) [1 -X (n)]

67 of 161

A = 3.62

X(n)

n

Bifurcation

68 of 161

  • Start with one value of A.
  • Start with x(1) = 0.5.
  • Use the equation to

compute x(2) from x(1).

  • Use the equation to

compute x(3) from x(2) and

so on... up to x(300).

x(n + 1) = A x(n) [1 -x(n)]

69 of 161

  • Ignore x(1) to x(50), these

are the transient values off

of the attractor.

  • Plot x(51) to x(300) on the

Y-axis over the value of A

on the X-axis.

  • Change the value of A, and

repeat the procedure again.

x(n + 1) = A x(n) [1 -x(n)]

70 of 161

Sudden changes of the pattern indicate bifurcations ( )

x(n)

x(n)

71 of 161

The energy in glucose is transfered to ATP. ATP is used as an energy source to drive biochemical reactions.

Glycolysis

+

-

-

72 of 161

periodic

Theory

Markus and Hess 1985 Arch. Biol. Med. Exp. 18:261-271

Glycolysis

time

sugar input

ATP output

chaotic

time

time

time

73 of 161

Experiments

Hess and Markus 1987 Trends. Biomed. Sci. 12:45-48

cell-free extracts from baker’s yeast

Glycolysis

ATP measured by fluorescence glucose input

time

74 of 161

Experiments

Hess and Markus 1987 Trends. Biomed. Sci. 12:45-48

Periodic

fluorescence

Glycolysis

Vin

75 of 161

Glycolysis

Experiments

Hess and Markus 1987 Trends. Biomed. Sci. 12:45-48

Chaotic

20 min

76 of 161

Glycolysis

Markus et al. 1985. Biophys. Chem 22:95-105

Bifurcation Diagram

chaos

theory

experiment

77 of 161

Glycolysis

Markus et al. 1985. Biophys. Chem 22:95-105

ADP measured at

the same phase each time of the input sugar flow cycle

(ATP is related to ADP)

period of the input sugar flow cycle

# =

period of the ATP

concentration

frequency of the input sugar flow cycle

78 of 161

Phase Transitions

Haken 1983 Synergetics: An Introduction Springer-Verlag

Kelso 1995 Dynamic Patterns MIT Press

Tap the left index finger

in-phase with the tick

of the metronome.

Try to tap the right index finger out-of-phase with the tick of the metronome.

79 of 161

Phase Transitions

Haken 1983 Synergetics: An Introduction Springer-Verlag

Kelso 1995 Dynamic Patterns MIT Press

As the frequency of the metronome increases, the right finger shifts from out-of-phase to in-phase motion.

80 of 161

Position of Right Index Finger

Position of Left Index Finger

A. TIME SERIES

Phase Transitions

Haken 1983 Synergetics: An Introduction Springer-Verlag

Kelso 1995 Dynamic Patterns MIT Press

ADD

ABD

81 of 161

Position of Right Index Finger

​

360o

0o

B. POINT ESTIMATE OF RELATIVE PHASE

180o

Self-Organized Phase Transitions

Haken 1983 Synergetics: An Introduction Springer-Verlag

Kelso 1995 Dynamic Patterns MIT Press

2 sec

82 of 161

This bifurcation can be explained as a change in a potential energy function similar to the change which occurs in a physical phase transition.

system potential

scaling parameter

Phase Transition

Haken 1983 Synergetics: An Introduction Springer-Verlag

Kelso 1995 Dynamic Patterns MIT Press

83 of 161

+

Small changes in parameters can produce large changes in behavior.

+

10cc ArT

9cc ArT

84 of 161

Bifurcations can be used to test if a system is deterministic.

Deterministic

Mathematical Model

Experiment

observed bifurcations

predicted bifurcations

Match ?

85 of 161

The fractal dimension of the phase space set tells us if the data was generated by a random or deterministic mechanism.

Experimental

Data

x(t)

t

86 of 161

X(t+ t)

Phase Space

Set

X(t)

The fractal dimension of the phase space set tells us if the data was generated by a random or a deterministic mechanism.

87 of 161

Mechanism that generated the experimental data.

Deterministic

Random

d = low

d

The fractal dimension of the phase space set tells us if the data was generated by a random or a deterministic mechanism.

88 of 161

Epidemics

Schaffer and Kot 1986 Chaos ed. Holden,

Princeton Univ. Press

4000

15000

0

0

measles

New York

time series:

phase space:

chickenpox

89 of 161

Epidemics

Olsen and Schaffer 1990 Science 249:499-504

dimension of attractor in phase space

measles

chickenpox

Kobenhavn 3.1 3.4

Milwaukee 2.6 3.2

St. Louis 2.2 2.7

New York 2.7 3.3

90 of 161

Epidemics

Olsen and Schaffer 1990 Science 249:499-504

​

SEIR models - 4 independent

variables

S susceptible

E exposed, but not yet

infectious

I infectious

R recovered

91 of 161

Epidemics

Olsen and Schaffer 1990 Science 249:499-504

​

Conclusion:

measles: chaotic

chickenpox: noisy yearly cycle

92 of 161

time series: voltage

Kaplan and Cohen 1990 Circ. Res. 67:886-892

normal

fibrillation

death

D = 1

chaos

D =

random

Phase space

V(t), V(t+ t)

Electrocardiogram

ECG: Electrical recording of the muscle activity of the heart.

​

8

93 of 161

time series: voltage

Babloyantz and Destexhe 1988 Biol. Cybern. 58:203-211

normal

D = 6

chaos

Electrocardiogram

ECG: Electrical recording of the muscle activity of the heart.

​

94 of 161

Electrocardiogram

ECG: Electrical recording of the muscle activity of the heart.

​

time series: time between heartbeats

Babloyantz and Destexhe 1988 Biol. Cybern. 58:203-211

normal

D = 6

chaos

fibrillation death

D = 4

chaos

induced arrhythmias

D = 3

chaos

Evans, Khan, Garfinkel, Kass, Albano, and Diamond 1989 Circ. Suppl. 80:II-134

Zbilut, Mayer-Kress, Sobotka, O’Toole and Thomas 1989 Biol. Cybern, 61:371-381

95 of 161

Electroencephalogram

EEG: Electrical recording of the nerve activity of the brain.

Mayer-Kress and Layne 1987 Ann. N.Y. Acad. Sci. 504:62-78

time series: V(t)

phase space:

D=8 chaos

V(t)

V(t+ t)

96 of 161

Rapp, Bashore, Martinerie, Albano, Zimmerman, and Mees 1989 Brain Topography 2:99-118

Babloyantz and Destexhe 1988 In: From Chemical to Biological Organization ed. Markus, Muller, and Nicolis, Springer-Verlag

Xu and Xu 1988 Bull. Math. Biol. 5:559-565

Electroencephalogram

EEG: Electrical recording of the nerve activity of the brain.

97 of 161

Different groups find different dimensions under the same experimental conditions.

Electroencephalogram

EEG: Electrical recording of the nerve activity of the brain.

98 of 161

mental task

quiet awake, eyes closed

quiet sleep

brain virus: Creutzfeld-

Jakob

Epilepsy: petit mal

meditation: Qi-kong

Electroencephalogram

EEG: Electrical recording of the nerve activity of the brain.

perhaps:

High Dimension

Low Dimension

99 of 161

Random Markov

How to compute the next x(n):

Each t pick a random

number 0 < R < 1

If open, and R < pc, then close.

If closed, and R < po, then open.

100 of 161

Random Markov

t

closed

If closed:

probability to open in the

next t=po

If open:

probability to close in the next t = pc

open

101 of 161

Deterministic Iterated Map

Liebovitch & Tóth 1991 J. Theor. Biol. 148:243-267

x(n) = the current at time n

x(n+1) = f (x(n))

open

closed

x(n+1)

x(n)

102 of 161

0

x(1)

0

x(2)

0

x(3)

0

x(2)

Deterministic Iterated Map

Liebovitch & Tóth 1991 J. Theor. Biol. 148:243-267

How to compute the next x(n):

103 of 161

Tacoma Narrows Bridge

Thursday November 7, 1940

Good modern review (explaining

why the explanation given in physics

textbooks is wrong):

Billah and Scanlan 1991

Am. J. Phys. 59:118-124

104 of 161

Tacoma Narrows Bridge

Equation of simple, forced resonance:

x + Ax + Bx = f ( t )

Equation of flutter that destroyed

the Tacoma Narrows Bridge:

x + Ax + Bx = f ( x, x )

105 of 161

Tacoma Narrows Bridge

Scanlan and Vellozzi 1980 in Long Span Bridges ed. Cohen and Birdsall pp. 247-263 NYAS

Wind Tunnel Tests

AIRFOIL

ORIGIONAL

TACOMA NARROWS

(

106 of 161

Tacoma Narrows Bridge

The drag on an airplane wing (A) increases with wind speed.

Wind Tunnel Tests

0.3

0.2

0.1

0

0.1

0.2

A2

OTN

U

NB

A

*

The drag on the OTN (original Tacoma Narrows) bridge changes sign as the wind speed increases, it enters into positive feedback.

107 of 161

Like a small molecule, relentlessly

kicked by the surrounding heat from

one state to another.

The change of states is driven by

chance kT thermal fluctuations.

CLOSED

random

OPEN

energy

Random

108 of 161

Deterministic

Like a lilttle mechanical

machine with sticks and springs.

The change of states is driven by

coherent motions that result from

the structure and the atomic,

electrostatic, and hydrophobic

forces in the channel protein.

CLOSED

OPEN

energy

deterministic

109 of 161

Analyzing Experimental Data

In principle, you can tell if the

data was generated by a random

or a deterministic mechanism.

The Good News:

110 of 161

Analyzing Experimental Data

In practice, it isn’t easy.

The Bad News:

111 of 161

Need Lots of Data

  • Very large data sets: 10d?
  • Sampling rate must cover the

attractor evenly.

Sample too often: only see 1-d trajectories.

Sample too rarely; don’t see the attractor at all.

​

Why it’s Hard to Tell Random from Deterministic Mechanisms

112 of 161

Why it’s Hard to Tell Random from Deterministic Mechanisms

Analyzing the Data is Tricky

  • Choice of lag time t for the embedding.
    • lag too small: the variable doesn’t change enough, derivatives not accurate.
    • lag too long: the variable changes too much, derivatives not accurate.
  • Method of evaluating the dimension.

113 of 161

Mathematics is Not Known

  • Embedding theorems are only proved for smooth time series.

​

Why it’s Hard to Tell Random from Deterministic Mechanisms

114 of 161

How Many Times Series Values?

N =

Number of values

in the time series

needed to correctly

evaluate the dimension

of an attractor

of dimension D

N

when

D = 6

115 of 161

How Many Times Series Values?

Smith 1988

Phys. Lett. A133:283 42D

5,000,000,000

Wolff et al. 1985

Physica D16:285 30D

700,000,000

Wolf et al. 1985

Physica D16:285 10D

1,000,000

116 of 161

How Many Times Series Values?

Nerenberg &

Essex 1990

Phys. Rev.

A42:7065

D+2

2

_______1________

kd1/2[A In (k)](D+2)/2

D/2

2(k-1) ((D+4)/2)

(1/2) ((D+3)/2)

x[

]

200,000

117 of 161

How Many Times Series Values?

Ding et al. 1993

Phys. Rev.

Lett. 70:3872

10D/2

(D/2)!

D/2

10

1,000

Gershenfeld

1990 preprint

2D

118 of 161

Lorenz

t 0

X(t+ t)

X(t)

119 of 161

Lorenz

X(t+ t)

X(t)

t Just Right

t correlation time

120 of 161

Lorenz

X(t+ t)

X(t)

8

t

121 of 161

Takens’ Theorem

If

122 of 161

X(t+ t)

X(t)

Then,

the lag plot constructed from the data

123 of 161

dX(t)

dt

X(t)

Is a linear transformation

of the real phase space

124 of 161

dX(t)

dt

because

X(t+ t) - X(t)

t

125 of 161

Since the fractal dimension is invariant under a linear transformation, the fractal dimension of the lag plot is equal to the fractal dimension of the real phase space set.

126 of 161

Takens’ Theorem

If the data does not satisfy these assumptions then we are not guaranteed that the fractal dimension of the lag plot is equal to the fracfal dimension of the real phase space set.

127 of 161

The ion channel current is not smooth, it is fractal (bursts within bursts) and therefore not differentiable.

​

Thus the assumptions of the theroem are not met and we are not guaranteed that the fractal dimension of the lag plot is equal to the fractal dimension of the real phase space set.

For example:

128 of 161

Osborne & Provenzale 1989

Physica D35:381

They used a Fourier series to generate a fractal time series whose power spectra was 1/f . They randomized the phases of the terms in the Fourier series so that the fractal dimension of the real phase space set was infinite. But, they found that the fractal dimension of the lag plots was as low as 1.

For example:

129 of 161

RANDOMLY pick numbers

Pathological example where an infinite dimensional random process has a LOW dimension attractor

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

6

130 of 161

Time Series: 6, 6, 6, 6, 6, 6, 6, 6 ...

Phase Space:

​

Pathological example where an infinite dimensional random process has a LOW dimension attractor

D = 0

6

6

6

131 of 161

Organization of the Vectors in the Phase Space Set

Kaplan and Glass 1992 Phys. Rev. Lett. 68:427-430

small

average direction

Random

no uniform flow

132 of 161

Organization of the Vectors in the Phase Space Set

Kaplan and Glass 1992 Phys. Rev. Lett. 68:427-430

large

Deterministic

average direction

uniform flow

133 of 161

Surrogate Data Set

Theiler et al. 1992 Physica D58:77-94

original phase space set

surrogate phase space set

same

original time

series

surrogate time series

R

A

N

D

O

M

same first order

correlations

higher orders

scrambled

134 of 161

Surrogate Data Set

Theiler et al. 1992 Physica D58:77-94

surrogate phase space set

different

surrogate time series

same first order

correlations

higher orders

scrambled

DETERMINISTIC

original phase space set

original time

series

135 of 161

Time Series phase space

Experiments

Dimension

​

Low = deterministic

High = random

examples: ECG, EEG

WEAK

136 of 161

vary a parameter

Experiments

predicted by a nonlinear model

STRONG

see behavior

electrical stimulation

of cells, biochemical reactions

examples:

137 of 161

Control

system output

Non-Chaotic System

control parameter

138 of 161

Control

system output

Chaotic System

control parameter

139 of 161

Control of Chaos

light intensity of a laser

Roy et al. 1992 Phys. Rev. Lett. 68:1259-1262

NO CONTROL

0

0.5 msec

Intensity

140 of 161

Control of Chaos

light intensity of a laser

Roy et al. 1992 Phys. Rev. Lett. 68:1259-1262

CONTROL

0

0.2 msec

Intensity

Control

141 of 161

Control of Chaos

light intensity of a laser

Roy et al. 1992 Phys. Rev. Lett. 68:1259-1262

CONTROL

0

0.2 msec

Intensity

Control

142 of 161

Control of Chaos

motion of a magnetoelastic ribbon

Ditto, Rauseo, and Spano 1990 Phys. Rev. Lett. 65:3211-3214

electromagnets

magnetoelastic

ribbon

B = 0

143 of 161

B > B1

Control of Chaos

motion of a magnetoelastic ribbon

Ditto, Rauseo, and Spano 1990 Phys. Rev. Lett. 65:3211-3214

144 of 161

Control of Chaos

motion of a magnetoelastic ribbon

Ditto, Rauseo, and Spano 1990 Phys. Rev. Lett. 65:3211-3214

sensor

X

Xn = X (t = nT)

2

T

B = Bo sin ( t)

145 of 161

Control of Chaos

motion of a magnetoelastic ribbon

Ditto, Rauseo, and Spano 1990 Phys. Rev. Lett. 65:3211-3214

iteration

number

0 - 2359

2360 - 4799

4800 - 7099

7100 - 10000

none

period 1

period 2

period 1

control

146 of 161

Control of Chaos

motion of a magnetoelastic ribbon

Ditto, Rauseo, and Spano 1990 Phys. Rev. Lett. 65:3211-3214

4.5

4.0

3.5

3.0

2.5

0

2000

4000

6000

8000

10000

Iteration Number

Xn

147 of 161

Control of Biological Systems

The Old Way

Brute Force Control.

BIG machine

BIG power

Heart

Amps

148 of 161

Control of Biological Systems

The New Way

Cleverly timed, delicate pulses.

little machine

little power

mA

Heart

149 of 161

The Old Way

Forces drive the system between stable states.

How do we think of biological systems?

150 of 161

How do we think of biological systems?

Force D

Force E

Stable State B

Stable State A

Stable State C

151 of 161

How do we think of biological systems?

The New Way

Hanging around for a while in one condition forces the system into another condition.

152 of 161

Dynamics of A

Dynamics of B

How do we think of biological systems?

Unstable State B

Unstable State A

Unstable State C

153 of 161

Summary of Chaos

FEW INDEPENDENT VARIABLES

​

Behavior is so complex that it mimics random behavior.

154 of 161

Summary of Chaos

​

​

The value of the variables at the next instant in time can be calculated from their values at the previous instant in time.

xi (t+ t) = f (xi (t))

DYNAMICAL SYSTEM

DETERMINISTIC

155 of 161

Summary of Chaos

x1(t+ t) - x2(t+ t) = Ae t

SENSITIVITY TO INITIAL CONDITIONS

NOT PREDICTABLE IN THE LONG RUN

156 of 161

Summary of Chaos

STRANGE ATTRACTOR

Phase space is low dimensional (often fractal).

157 of 161

Books About Chaos

J. Gleick

Chaos: Making a New Science

1987 Viking

​

introductory

158 of 161

Books About Chaos

F. C. Moon

Chaotic and Fractal Dynamics

1992 John Wiley & Sons

​

intermediate mathematics

159 of 161

Books About Chaos

J. Guckenheimer & P. Holmes

Nonlinear Oscillations,

Dynamical Systems, and

Bifurcations of Vector Fields

1983 Springer-Verlag

E. Ott

Chaos in Dynamical Systems

1993 Cambridge Univ. Press

advanced mathematics

160 of 161

A. V. Holden

Chaos

1986 Princeton Univ. Press

​

E. & L. Moskilde

Complexity, Chaos and

Biological Evolution

1991 Plenum

​

​

reviews of chaos in biology

Books About Chaos

161 of 161

Books About Chaos

J. Bassingthwaighte,

L. Liebovitch, & B. West

Fractal Physiology

1994 Oxford Univ. Press

​

reviews of chaos in biology