Methodology
Background and Purpose
References
Lipid Regulation Table
Figure 1. PCA Scores Plot for PC1 (56.70%) and PC2 (19.32%) comparing the lipid composition between two calcified strains E. huxleyi 607 and E. huxleyi 624 before grazing (control) and after grazing. There are clear differences in lipid regulation between the control and grazing treatments within each strain. Each treatment includes three replicates as shown in the data points.
Figure 2. PLS-DA Scores Plot for LV1 (55.91%) and LV2 (7.74%) comparing the lipid composition between two calcified strains E. huxleyi 607 and E. huxleyi 624 before grazing (control) and after grazing. The differences in lipid regulation between the control and grazing treatments are more prominent in the PLS-DA than PCA for each strain. Each treatment includes three replicates as shown in the data points.
Figure 4. PLS-DA Scores Plot for LV1 (56.93%) and LV2 (21.93%) comparing the lipid composition between two naked strains E. huxleyi 374 and E. huxleyi 379 before grazing (control) and after grazing. The differences in lipid regulation between the control and grazing treatments are more prominent in the PLS-DA than PCA for each strain. Each treatment includes three replicates as shown in the data points.
Figure 3. PCA Scores Plot for PC1 (60.71%) and PC4 (4.86%) comparing the lipid composition between two naked strains E. huxleyi 374 and E. huxleyi 379 before grazing (control) and after grazing. There are clear differences in lipid regulation between the control and grazing treatments within each strain. Each treatment includes three replicates as shown in the data points.
1. Monteiro, F. M., Bach, L. T., Brownlee, C., Bown, P., Rickaby, R. E., Poulton, A. J., Tyrrell, T., Beaufort, L., Dutkiewicz, S., Gibbs, S., Gutowska, M. A., Lee, R., Riebesell, U., Young, J., & Ridgwell, A. (2016). Why marine phytoplankton calcify. Science advances, 2(7), e1501822.
2. Harvey, E.L. and others. 2015. Consequences of strain variability and calcification in Emiliania huxleyi on microzooplankton grazing. Journal of plankton Research 37(6), 1137-1148.
3. Field, C.B., and others. 1998. Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281, 237-240.
4. Calbet, A. and Landry, M.R. 2004. Phytoplankton growth, microzooplankton grazing, and carbon cycling in marine systems. Limnology and Oceanography 49, 51-57.
5. Guschina I.A., Harwood J.L. (2009) Algal lipids and effect of the environment on their biochemistry. In: Kainz M., Brett M., Arts M. (eds) Lipids in Aquatic Ecosystems. Springer, New York, NY
6. Collins, J.R., and others. 2016. LOBSTAHS: an adduct-based lipidomics strategy for discovery and identification of oxidative stress biomarkers. Analytical Chemistry 88, 7154-7162.
7. Hunter, J.E., and others. 2015. Targeted and untargeted lipidomics of Emiliania huxleyi viral infection and life cycle phases highlights molecular biomarkers of infection, susceptibility, and ploidy. Frontiers in Marine Science 2, 81.
8. Poulin, R.X., and others. 2018. Chemical encoding of risk perception and predator detection among marine estuarine invertebrates. PNAS 115(4), 662-667.
Table 1. The lipid composition of each strain of E. huxleyi was analyzed via PCA and PLS-DA, and the lipids that held prominent weight in the PLS-DA quantitatively compared treatments of each individual strain before and after grazing. The colored boxes show that there were many unique changes in lipid composition within each individual strain. The orange boxes represent the presence of more lipids before grazing and the blue boxes represent the presence of more lipids after grazing. The symbols beside the lipid types represent the chemical background of each lipid, whether they are a polar (shaded circle), nonpolar (unshaded square), or pigment (unshaded diamond) lipid.
Acknowledgments
Conclusions and Future Work
A tremendous thank you to Dr. Kelsey Poulson-Ellestad for mentoring me through my first independent research project at Roosevelt University with relentless enthusiasm and support, and for supplying cultures of E. huxleyi and O. marina along with all the necessary equipment to finish each experiment. Also, thank you to Elizabeth L. Harvey and Kyle M. J. Mayers for organizing the data that I used to analyze via Eigenvector Research Inc.
Impacts of Oxyrrhis marina Grazing on Emiliania huxleyi and the Changes in Lipid Composition between Calcified and Naked Strains
Sarah Chavez¹, Kelsey Poulson-Ellestad², Kyle Mayers³, Helen Fredricks⁴, Benjamin Van Mooy⁵, and Elizabeth Harvey⁶
1Roosevelt University, Chicago, IL, USA; 2NORCE Norwegian Research Centre, Bergen, Norway; 3Woods Hole Oceanographic Institution, Woods Hole, MA USA ; 4University of Georgia, Savannah, GA, USA
# Lipids | Lipid Type | # Lipids Change 607 | # Lipids Change 624 | # Lipids Change 379 | # Lipids Change 374 |
46 | ● S_DGCC | 8 | 27 | 24 | 15 |
41 | ● SQDG | 7 | 19 | 26 | 9 |
39 | ● PDPT | 5 | 18 | 21 | 12 |
36 | ● DGDG | 5 | 19 | 24 | 15 |
14 | ● PC | 1 | 5 | 8 | 7 |
14 | ● Wax Ester | 1 | 9 | 6 | 5 |
12 | ● PG | 3 | 8 | 7 | 9 |
11 | ● Coprostanol Esters | 1 | 6 | 8 | 5 |
4 | ● Cholesterol Esters | 0 | 1 | 1 | 0 |
3 | ● BLL | 1 | 0 | 2 | 0 |
3 | ● DAG | 0 | 1 | 0 | 0 |
3 | ● PA | 1 | 2 | 1 | 1 |
1 | ● MGDG | 0 | 0 | 0 | 1 |
1 | ● PUA | 0 | 1 | 0 | 0 |
25 | □ TAG | 4 | 15 | 14 | 7 |
4 | □ FFA | 2 | 3 | 2 | 0 |
4 | □ PDMS | 0 | 3 | 1 | 0 |
3 | □ Cholesterol Acetate | 0 | 2 | 3 | 0 |
2 | □ PQ9OH | 0 | 2 | 1 | 1 |
1 | □ UQ | 0 | 0 | 0 | 1 |
3 | ◊ Chl_ | 0 | 1 | 0 | 0 |
1 | ◊ Astaxanthin | 0 | 1 | 0 | 0 |
1 | ◊ Dd_Ddc | 0 | 1 | 1 | 0 |
1 | ◊ Fuco | 0 | 0 | 1 | 0 |
LEGEND | ● Polar |
More Lipids Present Before Grazing | □ Nonpolar |
More Lipids Present After Grazing | ◊ Pigment |
Calcified Strains Reveal Grazing Stress and Lipid Change
Naked Strains Reveal Grazing Stress and Lipid Change