MRI Imaging With Paraview and MEDICALHOLODECK

Liza Kolev Spring 2023

Takeaways

• Copied handout as a page in the wiki
• Made page about In-Class Activity results and everyone’s thoughts
• Will be updated once everyone responds!

• Data uploaded to wiki
• Added to Paraview page the app’s collaboration limitations
• Made page about SyGlass View
• Tutorial on how to view data
• Tutorial on how to collaborate
• Made page about MEDICALHOLODECK
• Tutorial on how to view data (more than one dataset!)
• Tutorial on collaboration
• Information about licenses

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• Paraview is an OpenSource application, so it’s VR is only being updated based on consumer feedback
• It was even discontinued at one point and was brought back a year after an OpenVR discussion was started on the forum
• Discovered SyGlass View and MEDICALHOLODECK
• SyGlass View only viewed part of brain scan ☹
• MEDICALHOLODECK viewed volume entirely but free trial only lasts a week
• Learned how to view MRI image in Adobe Photoshop as individual slice layers and as a 3D volume
• Editing volume size is not easy
• Was able to view edited file in SyGlass but smushed
• Possible to convert Nifti to DICOM and back!

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PROJECT 2 FINAL PRESENTATION

2

05/04/23

Deliverables